RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	ZNF521	Q96K83	1311 aa		19.49	■□□□□ 0.71
UMPS-209	ENST00000497791	CABP4	P57796	275 aa		19.49	■□□□□ 0.71
UMPS-209	ENST00000497791	LMOD3	Q0VAK6	560 aa		19.49	■□□□□ 0.71
UMPS-209	ENST00000497791	PAPPA	Q13219	1627 aa		19.48	■□□□□ 0.71
UMPS-209	ENST00000497791	TEF	Q10587	303 aa		19.48	■□□□□ 0.71
UMPS-209	ENST00000497791	SPINK5	Q9NQ38	1064 aa	Predicted RBP	19.48	■□□□□ 0.71
UMPS-209	ENST00000497791	TMOD3	Q9NYL9	352 aa		19.48	■□□□□ 0.71
UMPS-209	ENST00000497791	KDM3B	Q7LBC6	1761 aa		19.48	■□□□□ 0.71
UMPS-209	ENST00000497791	SLC39A6	Q13433	755 aa		19.46	■□□□□ 0.71
UMPS-209	ENST00000497791	ASAP1	Q9ULH1	1129 aa		19.46	■□□□□ 0.71
UMPS-209	ENST00000497791	KCNQ3	O43525	872 aa		19.46	■□□□□ 0.71
UMPS-209	ENST00000497791	NCBP3	Q53F19	620 aa	Known RBP	19.46	■□□□□ 0.71
UMPS-209	ENST00000497791	BCL11B	Q9C0K0	894 aa	Predicted RBP	19.46	■□□□□ 0.71
UMPS-209	ENST00000497791	LAS1L	Q9Y4W2	734 aa	Known RBP	19.45	■□□□□ 0.7
UMPS-209	ENST00000497791	UBR2	Q8IWV8	1755 aa		19.44	■□□□□ 0.7
UMPS-209	ENST00000497791	TAF7	Q15545	349 aa	Predicted RBP	19.44	■□□□□ 0.7
UMPS-209	ENST00000497791	ATG3	Q9NT62	314 aa		19.43	■□□□□ 0.7
UMPS-209	ENST00000497791	BTBD11	A6QL63	1104 aa		19.43	■□□□□ 0.7
UMPS-209	ENST00000497791	CDCA7L	Q96GN5	454 aa		19.43	■□□□□ 0.7
UMPS-209	ENST00000497791	ZNF853	P0CG23	659 aa		19.42	■□□□□ 0.7
UMPS-209	ENST00000497791	NGEF	Q8N5V2	710 aa		19.42	■□□□□ 0.7
UMPS-209	ENST00000497791	LY75	O60449	1722 aa		19.42	■□□□□ 0.7
UMPS-209	ENST00000497791	KCP	Q6ZWJ8	1503 aa		19.41	■□□□□ 0.7
UMPS-209	ENST00000497791	WDR63	Q8IWG1	891 aa		19.41	■□□□□ 0.7
UMPS-209	ENST00000497791	TSR2	Q969E8	191 aa	Known RBP	19.41	■□□□□ 0.7
UMPS-209	ENST00000497791	ZBED9	Q6R2W3	1325 aa		19.4	■□□□□ 0.7
UMPS-209	ENST00000497791	CHL1	O00533	1208 aa		19.4	■□□□□ 0.7
UMPS-209	ENST00000497791	MBIP	Q9NS73	344 aa		19.4	■□□□□ 0.7
UMPS-209	ENST00000497791	TSPYL4	Q9UJ04	414 aa		19.4	■□□□□ 0.7
UMPS-209	ENST00000497791	CFAP44	Q96MT7	982 aa		19.4	■□□□□ 0.7
UMPS-209	ENST00000497791	APBA3	O96018	575 aa		19.39	■□□□□ 0.69
UMPS-209	ENST00000497791	KRT24	Q2M2I5	525 aa		19.39	■□□□□ 0.69
UMPS-209	ENST00000497791	ZNF790	Q6PG37	636 aa		19.39	■□□□□ 0.69
UMPS-209	ENST00000497791	IFT57	Q9NWB7	429 aa		19.39	■□□□□ 0.69
UMPS-209	ENST00000497791	PALLD	Q8WX93	1383 aa		19.38	■□□□□ 0.69
UMPS-209	ENST00000497791	C5	P01031	1676 aa		19.38	■□□□□ 0.69
UMPS-209	ENST00000497791	IL16	Q14005	1332 aa		19.38	■□□□□ 0.69
UMPS-209	ENST00000497791	PTCD1	O75127	700 aa	Known RBP	19.38	■□□□□ 0.69
UMPS-209	ENST00000497791	KCNQ4	P56696	695 aa		19.38	■□□□□ 0.69
UMPS-209	ENST00000497791	SLC4A9	Q96Q91	983 aa		19.38	■□□□□ 0.69
UMPS-209	ENST00000497791	UPF1	Q92900	1129 aa	Known RBP eCLIP	19.37	■□□□□ 0.69
UMPS-209	ENST00000497791	CALD1	Q05682	793 aa	Known RBP	19.36	■□□□□ 0.69
UMPS-209	ENST00000497791	GOLGA2	Q08379	1002 aa		19.36	■□□□□ 0.69
UMPS-209	ENST00000497791	DEFB132	Q7Z7B7	95 aa		19.36	■□□□□ 0.69
UMPS-209	ENST00000497791	ZNF496	Q96IT1	587 aa	Predicted RBP	19.36	■□□□□ 0.69
UMPS-209	ENST00000497791	TJP1	Q07157	1748 aa		19.36	■□□□□ 0.69
UMPS-209	ENST00000497791	FANCI	Q9NVI1	1328 aa		19.36	■□□□□ 0.69
UMPS-209	ENST00000497791	GNAI1	P63096	354 aa		19.36	■□□□□ 0.69
UMPS-209	ENST00000497791	SLFN5	Q08AF3	891 aa		19.36	■□□□□ 0.69
UMPS-209	ENST00000497791	TAF1L	Q8IZX4	1826 aa		19.35	■□□□□ 0.69
UMPS-209	ENST00000497791	PRAMEF22	A3QJZ6	481 aa		19.35	■□□□□ 0.69
UMPS-209	ENST00000497791	RBM42	Q9BTD8	480 aa	Known RBP	19.35	■□□□□ 0.69
UMPS-209	ENST00000497791	RGPD3	A6NKT7	1758 aa	Predicted RBP	19.34	■□□□□ 0.69
UMPS-209	ENST00000497791	RGPD4	Q7Z3J3	1758 aa		19.34	■□□□□ 0.69
UMPS-209	ENST00000497791	EIF4A1	P60842	406 aa	Known RBP	19.34	■□□□□ 0.69
UMPS-209	ENST00000497791	EN1	Q05925	392 aa	Predicted RBP	19.34	■□□□□ 0.69
UMPS-209	ENST00000497791	TTC5	Q8N0Z6	440 aa		19.34	■□□□□ 0.69
UMPS-209	ENST00000497791	PROM2	Q8N271	834 aa		19.34	■□□□□ 0.69
UMPS-209	ENST00000497791	LOC102724428	A0A0B4J2F2	783 aa		19.33	■□□□□ 0.68
UMPS-209	ENST00000497791	SIK1	P57059	783 aa		19.33	■□□□□ 0.68
UMPS-209	ENST00000497791	LRRC4B	Q9NT99	713 aa		19.33	■□□□□ 0.68
UMPS-209	ENST00000497791	BABAM1	Q9NWV8	329 aa		19.33	■□□□□ 0.68
UMPS-209	ENST00000497791	MYH14	Q7Z406	1995 aa	Known RBP	19.32	■□□□□ 0.68
UMPS-209	ENST00000497791	PLSCR1	O15162	318 aa		19.32	■□□□□ 0.68
UMPS-209	ENST00000497791	EZH2	Q15910	746 aa	Known RBP	19.32	■□□□□ 0.68
UMPS-209	ENST00000497791	TRMT2A	Q8IZ69	625 aa	Known RBP	19.32	■□□□□ 0.68
UMPS-209	ENST00000497791	SMARCC1	Q92922	1105 aa	Predicted RBP	19.32	■□□□□ 0.68
UMPS-209	ENST00000497791	HEG1	Q9ULI3	1381 aa		19.32	■□□□□ 0.68
UMPS-209	ENST00000497791	COL5A3	P25940	1745 aa	Predicted RBP	19.31	■□□□□ 0.68
UMPS-209	ENST00000497791		E9PSI1	815 aa		19.31	■□□□□ 0.68
UMPS-209	ENST00000497791	ITPK1	Q13572	414 aa		19.31	■□□□□ 0.68
UMPS-209	ENST00000497791	DUSP27	Q5VZP5	1158 aa		19.31	■□□□□ 0.68
UMPS-209	ENST00000497791	TSPYL6	Q8N831	410 aa		19.31	■□□□□ 0.68
UMPS-209	ENST00000497791	C8orf58	Q8NAV2	365 aa		19.31	■□□□□ 0.68
UMPS-209	ENST00000497791	CAMKK2	Q96RR4	588 aa		19.31	■□□□□ 0.68
UMPS-209	ENST00000497791	ZNF831	Q5JPB2	1677 aa		19.31	■□□□□ 0.68
UMPS-209	ENST00000497791	RREB1	Q92766	1687 aa		19.31	■□□□□ 0.68
UMPS-209	ENST00000497791	FMNL2	Q96PY5	1086 aa		19.3	■□□□□ 0.68
UMPS-209	ENST00000497791	ELL2	O00472	640 aa	Predicted RBP	19.3	■□□□□ 0.68
UMPS-209	ENST00000497791	SF3B2	Q13435	895 aa	Known RBP	19.3	■□□□□ 0.68
UMPS-209	ENST00000497791	LAMB4	A4D0S4	1761 aa		19.3	■□□□□ 0.68
UMPS-209	ENST00000497791	NUP188	Q5SRE5	1749 aa		19.29	■□□□□ 0.68
UMPS-209	ENST00000497791	CIC	Q96RK0	1608 aa	Predicted RBP	19.29	■□□□□ 0.68
UMPS-209	ENST00000497791	ATP6V1A	P38606	617 aa		19.29	■□□□□ 0.68
UMPS-209	ENST00000497791	EXOSC9	Q06265	439 aa	Known RBP	19.29	■□□□□ 0.68
UMPS-209	ENST00000497791	TXNRD1	Q16881	649 aa		19.29	■□□□□ 0.68
UMPS-209	ENST00000497791	DNAJC10	Q8IXB1	793 aa		19.29	■□□□□ 0.68
UMPS-209	ENST00000497791	MYH16	Q9H6N6	1097 aa		19.29	■□□□□ 0.68
UMPS-209	ENST00000497791	CCNL1	Q9UK58	526 aa	Predicted RBP	19.29	■□□□□ 0.68
UMPS-209	ENST00000497791	GIGYF1	O75420	1035 aa	Predicted RBP	19.28	■□□□□ 0.68
UMPS-209	ENST00000497791	CCDC125	Q86Z20	511 aa		19.28	■□□□□ 0.68
UMPS-209	ENST00000497791	BAG6	P46379	1132 aa		19.27	■□□□□ 0.68
UMPS-209	ENST00000497791	LINC00116	Q8NCU8	138 aa		19.27	■□□□□ 0.68
UMPS-209	ENST00000497791	USP16	Q9Y5T5	823 aa		19.27	■□□□□ 0.68
UMPS-209	ENST00000497791	TUBGCP6	Q96RT7	1819 aa		19.25	■□□□□ 0.67
UMPS-209	ENST00000497791	SNRPA1	P09661	255 aa	Known RBP	19.25	■□□□□ 0.67
UMPS-209	ENST00000497791	VSIG10	Q8N0Z9	540 aa		19.25	■□□□□ 0.67
UMPS-209	ENST00000497791	C4B	P0C0L5	1744 aa		19.25	■□□□□ 0.67
UMPS-209	ENST00000497791	NECTIN2	Q92692	538 aa		19.24	■□□□□ 0.67
UMPS-209	ENST00000497791	PIP4K2A	P48426	406 aa	Predicted RBP	19.24	■□□□□ 0.67

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms