RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 EIF4G2P78344 907 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTPN3-206ENST00000497739 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
PTPN3-206ENST00000497739 SLC39A7Q92504 469 aa13.21□□□□□ -0.29
PTPN3-206ENST00000497739 SHANK3Q9BYB0 1731 aa13.2□□□□□ -0.3
PTPN3-206ENST00000497739 CHD4Q14839 1912 aa13.2□□□□□ -0.3
PTPN3-206ENST00000497739 MS4A4AQ96JQ5 239 aa13.2□□□□□ -0.3
PTPN3-206ENST00000497739 PUS7Q96PZ0 661 aaKnown RBP13.2□□□□□ -0.3
PTPN3-206ENST00000497739 CD163L1Q9NR16 1453 aa13.2□□□□□ -0.3
PTPN3-206ENST00000497739 BTAF1O14981 1849 aa13.2□□□□□ -0.3
PTPN3-206ENST00000497739 USP31Q70CQ4 1352 aa13.2□□□□□ -0.3
PTPN3-206ENST00000497739 CSB-PGBD3P0DP91 1061 aa13.19□□□□□ -0.3
PTPN3-206ENST00000497739 C7P10643 843 aa13.19□□□□□ -0.3
PTPN3-206ENST00000497739 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
PTPN3-206ENST00000497739 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
PTPN3-206ENST00000497739 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
PTPN3-206ENST00000497739 PNPLA7Q6ZV29 1317 aa13.17□□□□□ -0.3
PTPN3-206ENST00000497739 QSER1Q2KHR3 1735 aa13.17□□□□□ -0.3
PTPN3-206ENST00000497739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.17□□□□□ -0.3
PTPN3-206ENST00000497739 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
PTPN3-206ENST00000497739 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
PTPN3-206ENST00000497739 TESK2Q96S53 571 aa13.16□□□□□ -0.3
PTPN3-206ENST00000497739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPN3-206ENST00000497739 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
PTPN3-206ENST00000497739 METRNQ9UJH8 293 aa13.16□□□□□ -0.3
PTPN3-206ENST00000497739 NSD2O96028 1365 aa13.16□□□□□ -0.3
PTPN3-206ENST00000497739 IL2RBP14784 551 aa13.15□□□□□ -0.3
PTPN3-206ENST00000497739 SLC12A5Q9H2X9 1139 aa13.15□□□□□ -0.3
PTPN3-206ENST00000497739 TUBGCP6Q96RT7 1819 aa13.14□□□□□ -0.31
PTPN3-206ENST00000497739 NLGN2Q8NFZ4 835 aa13.14□□□□□ -0.31
PTPN3-206ENST00000497739 OCEL1Q9H607 264 aa13.14□□□□□ -0.31
PTPN3-206ENST00000497739 NLRP2Q9NX02 1062 aa13.14□□□□□ -0.31
PTPN3-206ENST00000497739 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
PTPN3-206ENST00000497739 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
PTPN3-206ENST00000497739 GPR162Q16538 588 aa13.13□□□□□ -0.31
PTPN3-206ENST00000497739 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
PTPN3-206ENST00000497739 NME9Q86XW9 330 aa13.13□□□□□ -0.31
PTPN3-206ENST00000497739 SPRYD3Q8NCJ5 442 aa13.13□□□□□ -0.31
PTPN3-206ENST00000497739 KIF20BQ96Q89 1820 aa13.13□□□□□ -0.31
PTPN3-206ENST00000497739 ANKRD36BQ8N2N9 1353 aa13.12□□□□□ -0.31
PTPN3-206ENST00000497739 HSPA5P11021 654 aaKnown RBP13.12□□□□□ -0.31
PTPN3-206ENST00000497739 YBX3P16989 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTPN3-206ENST00000497739 SLC27A3Q5K4L6 730 aa13.12□□□□□ -0.31
PTPN3-206ENST00000497739 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
PTPN3-206ENST00000497739 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
PTPN3-206ENST00000497739 ANKRD24Q8TF21 1146 aa13.12□□□□□ -0.31
PTPN3-206ENST00000497739 SLC16A10Q8TF71 515 aa13.12□□□□□ -0.31
PTPN3-206ENST00000497739 LTN1O94822 1766 aa13.12□□□□□ -0.31
PTPN3-206ENST00000497739 COG3Q96JB2 828 aa13.11□□□□□ -0.31
PTPN3-206ENST00000497739 FAM208AQ9UK61 1670 aaKnown RBP13.1□□□□□ -0.31
PTPN3-206ENST00000497739 PPP1R37O75864 691 aa13.1□□□□□ -0.31
PTPN3-206ENST00000497739 KCNQ4P56696 695 aa13.1□□□□□ -0.31
PTPN3-206ENST00000497739 LY75O60449 1722 aa13.09□□□□□ -0.31
PTPN3-206ENST00000497739 ADCY9O60503 1353 aa13.08□□□□□ -0.31
PTPN3-206ENST00000497739 POLD1P28340 1107 aa13.08□□□□□ -0.32
PTPN3-206ENST00000497739 MEGF6O75095 1541 aa13.08□□□□□ -0.32
PTPN3-206ENST00000497739 DOT1LQ8TEK3 1739 aa13.08□□□□□ -0.32
PTPN3-206ENST00000497739 CFAP44Q96MT7 982 aa13.07□□□□□ -0.32
PTPN3-206ENST00000497739 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
PTPN3-206ENST00000497739 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
PTPN3-206ENST00000497739 ATP10DQ9P241 1426 aa13.06□□□□□ -0.32
PTPN3-206ENST00000497739 PLCG2P16885 1265 aa13.06□□□□□ -0.32
PTPN3-206ENST00000497739 VSIG10Q8N0Z9 540 aa13.06□□□□□ -0.32
PTPN3-206ENST00000497739 IP6K1Q92551 441 aa13.06□□□□□ -0.32
PTPN3-206ENST00000497739 POTEB2H3BUK9 544 aa13.05□□□□□ -0.32
PTPN3-206ENST00000497739 SEC24BO95487 1268 aa13.05□□□□□ -0.32
PTPN3-206ENST00000497739 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
PTPN3-206ENST00000497739 DDX54Q8TDD1 881 aaKnown RBP13.05□□□□□ -0.32
PTPN3-206ENST00000497739 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
PTPN3-206ENST00000497739 NSD3Q9BZ95 1437 aa13.05□□□□□ -0.32
PTPN3-206ENST00000497739 AMPHP49418 695 aa13.03□□□□□ -0.32
PTPN3-206ENST00000497739 COL23A1Q86Y22 540 aaPredicted RBP13.03□□□□□ -0.32
PTPN3-206ENST00000497739 GRIN3BO60391 1043 aa13.02□□□□□ -0.33
PTPN3-206ENST00000497739 GGNBP2Q9H3C7 697 aa13.02□□□□□ -0.33
PTPN3-206ENST00000497739 CCNL1Q9UK58 526 aaPredicted RBP13.02□□□□□ -0.33
PTPN3-206ENST00000497739 MAP3K19Q56UN5 1328 aa13.02□□□□□ -0.33
PTPN3-206ENST00000497739 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
PTPN3-206ENST00000497739 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
PTPN3-206ENST00000497739 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
PTPN3-206ENST00000497739 ANKRD26Q9UPS8 1709 aa13.01□□□□□ -0.33
PTPN3-206ENST00000497739 TOGARAM1Q9Y4F4 1720 aa13□□□□□ -0.33
PTPN3-206ENST00000497739 C5P01031 1676 aa13□□□□□ -0.33
PTPN3-206ENST00000497739 HOXC9P31274 260 aa13□□□□□ -0.33
PTPN3-206ENST00000497739 MSL1Q68DK7 614 aa13□□□□□ -0.33
PTPN3-206ENST00000497739 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
PTPN3-206ENST00000497739 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
PTPN3-206ENST00000497739 TMEM121BQ9BXQ6 578 aaPredicted RBP12.99□□□□□ -0.33
PTPN3-206ENST00000497739 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
PTPN3-206ENST00000497739 CD2APQ9Y5K6 639 aa12.99□□□□□ -0.33
PTPN3-206ENST00000497739 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
PTPN3-206ENST00000497739 FYB1O15117 783 aa12.98□□□□□ -0.33
PTPN3-206ENST00000497739 FBLN1P23142 703 aa12.98□□□□□ -0.33
PTPN3-206ENST00000497739 ZCRB1Q8TBF4 217 aaKnown RBP12.98□□□□□ -0.33
PTPN3-206ENST00000497739 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
PTPN3-206ENST00000497739 HSPA6P17066 643 aa12.97□□□□□ -0.33
PTPN3-206ENST00000497739 CICQ96RK0 1608 aaPredicted RBP12.97□□□□□ -0.33
PTPN3-206ENST00000497739 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
PTPN3-206ENST00000497739 PPM1GO15355 546 aaPredicted RBP12.96□□□□□ -0.33
PTPN3-206ENST00000497739 NBPF6Q5VWK0 638 aa12.96□□□□□ -0.33
PTPN3-206ENST00000497739 NBPF4Q96M43 638 aa12.96□□□□□ -0.33
PTPN3-206ENST00000497739 PANK3Q9H999 370 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms