RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 EPHA4P54764 986 aa6.07□□□□□ -1.44
EXOSC3-208ENST00000496910 DPYDQ12882 1025 aa6.07□□□□□ -1.44
EXOSC3-208ENST00000496910 TMEM164Q5U3C3 297 aa6.07□□□□□ -1.44
EXOSC3-208ENST00000496910 CYP2U1Q7Z449 544 aa6.07□□□□□ -1.44
EXOSC3-208ENST00000496910 TRIM46Q7Z4K8 759 aa6.07□□□□□ -1.44
EXOSC3-208ENST00000496910 ANKMY2Q8IV38 441 aa6.07□□□□□ -1.44
EXOSC3-208ENST00000496910 SIRT1Q96EB6 747 aa6.07□□□□□ -1.44
EXOSC3-208ENST00000496910 ZNF594Q96JF6 807 aaPredicted RBP6.07□□□□□ -1.44
EXOSC3-208ENST00000496910 NOVA2Q9UNW9 492 aaKnown RBP6.07□□□□□ -1.44
EXOSC3-208ENST00000496910 LOC105371045A0A1W2PR82 267 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 ZBTB7CA1YPR0 619 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 CARNS1A5YM72 827 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 CAPN5O15484 640 aaPredicted RBP6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 GNRH1P01148 92 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 PTGIRP43119 386 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 ATP1A2P50993 1020 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 LAPTM4AQ15012 233 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 CCDC102BQ68D86 513 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 ZNF295-AS1Q8N0V1 137 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 TPCN2Q8NHX9 752 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 XAGE2Q96GT9 111 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 ZNF358Q9NW07 568 aa6.06□□□□□ -1.44
EXOSC3-208ENST00000496910 SFI1A8K8P3 1242 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 M0R2N6 131 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 ST8SIA5O15466 376 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 INHAP05111 366 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 GDF10P55107 478 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 CTC1Q2NKJ3 1217 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 SLC4A9Q96Q91 983 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 FHDC1Q9C0D6 1143 aaPredicted RBP6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 ARHGEF10LQ9HCE6 1279 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 AAASQ9NRG9 546 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 RAB6BQ9NRW1 208 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 DACH1Q9UI36 760 aa6.05□□□□□ -1.44
EXOSC3-208ENST00000496910 WDR62O43379 1518 aa6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 LTBP4Q8N2S1 1624 aa6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 SENP3-EIF4A1A0A087X0R7 540 aa6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 A0A1W2PRU2 124 aa6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 SPINT1O43278 529 aa6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 BMP1P13497 986 aa6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 PDIA4P13667 645 aaKnown RBP6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 FOXK2Q01167 660 aa6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 CLN3Q13286 438 aa6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 PKDCCQ504Y2 493 aa6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 LARP1Q6PKG0 1096 aaKnown RBP6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 LINC00528Q8N1L1 170 aa6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 IRX2Q9BZI1 471 aaPredicted RBP6.04□□□□□ -1.44
EXOSC3-208ENST00000496910 RELBQ01201 579 aa6.03□□□□□ -1.44
EXOSC3-208ENST00000496910 MTFR1Q15390 333 aa6.03□□□□□ -1.44
EXOSC3-208ENST00000496910 FOXD4L5Q5VV16 416 aaPredicted RBP6.03□□□□□ -1.44
EXOSC3-208ENST00000496910 MRPL14Q6P1L8 145 aaKnown RBP6.03□□□□□ -1.44
EXOSC3-208ENST00000496910 ESYT1Q9BSJ8 1104 aa6.03□□□□□ -1.44
EXOSC3-208ENST00000496910 IQSEC3Q9UPP2 1182 aaPredicted RBP6.03□□□□□ -1.44
EXOSC3-208ENST00000496910 USTQ9Y2C2 406 aa6.03□□□□□ -1.44
EXOSC3-208ENST00000496910 USP3Q9Y6I4 520 aa6.03□□□□□ -1.44
EXOSC3-208ENST00000496910 ACIN1Q9UKV3 1341 aaKnown RBP6.02□□□□□ -1.45
EXOSC3-208ENST00000496910 SEC13P55735 322 aa6.02□□□□□ -1.45
EXOSC3-208ENST00000496910 OCLNQ16625 522 aa6.02□□□□□ -1.45
EXOSC3-208ENST00000496910 PHLDB3Q6NSJ2 640 aa6.02□□□□□ -1.45
EXOSC3-208ENST00000496910 TSEN2Q8NCE0 465 aaKnown RBP6.02□□□□□ -1.45
EXOSC3-208ENST00000496910 TSEN34Q9BSV6 310 aaKnown RBP6.02□□□□□ -1.45
EXOSC3-208ENST00000496910 ZNF395Q9H8N7 513 aaPredicted RBP6.02□□□□□ -1.45
EXOSC3-208ENST00000496910 AXIN1O15169 862 aa6.01□□□□□ -1.45
EXOSC3-208ENST00000496910 C21orf2O43822 256 aa6.01□□□□□ -1.45
EXOSC3-208ENST00000496910 CTSOP43234 321 aaPredicted RBP6.01□□□□□ -1.45
EXOSC3-208ENST00000496910 PSME1Q06323 249 aa6.01□□□□□ -1.45
EXOSC3-208ENST00000496910 POTEAQ6S8J7 498 aa6.01□□□□□ -1.45
EXOSC3-208ENST00000496910 FAM200AQ8TCP9 573 aa6.01□□□□□ -1.45
EXOSC3-208ENST00000496910 CLP1Q92989 425 aaKnown RBP6.01□□□□□ -1.45
EXOSC3-208ENST00000496910 CNKSR1Q969H4 720 aa6.01□□□□□ -1.45
EXOSC3-208ENST00000496910 TRIM52Q96A61 297 aa6.01□□□□□ -1.45
EXOSC3-208ENST00000496910 INSM2Q96T92 566 aaPredicted RBP6.01□□□□□ -1.45
EXOSC3-208ENST00000496910 SOS2Q07890 1332 aaPredicted RBP6□□□□□ -1.45
EXOSC3-208ENST00000496910 TOP2BQ02880 1626 aa6□□□□□ -1.45
EXOSC3-208ENST00000496910 WEE1P30291 646 aa6□□□□□ -1.45
EXOSC3-208ENST00000496910 RNF144AP50876 292 aaPredicted RBP6□□□□□ -1.45
EXOSC3-208ENST00000496910 SMTNP53814 917 aa6□□□□□ -1.45
EXOSC3-208ENST00000496910 SWI5Q1ZZU3 235 aa6□□□□□ -1.45
EXOSC3-208ENST00000496910 TNS4Q8IZW8 715 aa6□□□□□ -1.45
EXOSC3-208ENST00000496910 RNF217Q8TC41 542 aa6□□□□□ -1.45
EXOSC3-208ENST00000496910 TRAIPQ9BWF2 469 aa6□□□□□ -1.45
EXOSC3-208ENST00000496910 GRIP2Q9C0E4 1043 aa6□□□□□ -1.45
EXOSC3-208ENST00000496910 ATP13A2Q9NQ11 1180 aa6□□□□□ -1.45
EXOSC3-208ENST00000496910 SCHIP1Q9P0W5 487 aaPredicted RBP6□□□□□ -1.45
EXOSC3-208ENST00000496910 MRC2Q9UBG0 1479 aa6□□□□□ -1.45
EXOSC3-208ENST00000496910 PCF11O94913 1555 aaKnown RBP5.99□□□□□ -1.45
EXOSC3-208ENST00000496910 A6NJY4 79 aa5.99□□□□□ -1.45
EXOSC3-208ENST00000496910 GPC1P35052 558 aa5.99□□□□□ -1.45
EXOSC3-208ENST00000496910 CENPCQ03188 943 aa5.99□□□□□ -1.45
EXOSC3-208ENST00000496910 ESCO1Q5FWF5 840 aa5.99□□□□□ -1.45
EXOSC3-208ENST00000496910 ZFP42Q96MM3 310 aa5.99□□□□□ -1.45
EXOSC3-208ENST00000496910 PURBQ96QR8 312 aaKnown RBP5.99□□□□□ -1.45
EXOSC3-208ENST00000496910 SERTAD1Q9UHV2 236 aa5.99□□□□□ -1.45
EXOSC3-208ENST00000496910 LGR5O75473 907 aa5.98□□□□□ -1.45
EXOSC3-208ENST00000496910 CSB-PGBD3P0DP91 1061 aa5.98□□□□□ -1.45
EXOSC3-208ENST00000496910 ZDHHC1Q8WTX9 485 aa5.98□□□□□ -1.45
EXOSC3-208ENST00000496910 TSPAN10Q9H1Z9 355 aaPredicted RBP5.98□□□□□ -1.45
EXOSC3-208ENST00000496910 SNAPC4Q5SXM2 1469 aa5.97□□□□□ -1.45
EXOSC3-208ENST00000496910 SPATA31C2B4DYI2 1134 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms