RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 PROM2Q8N271 834 aa10.78□□□□□ -0.68
SMARCD3-215ENST00000496530 RTF1Q92541 710 aaKnown RBP10.78□□□□□ -0.68
SMARCD3-215ENST00000496530 MAPK8IP3Q9UPT6 1336 aa10.78□□□□□ -0.68
SMARCD3-215ENST00000496530 SCN11AQ9UI33 1791 aa10.77□□□□□ -0.68
SMARCD3-215ENST00000496530 GNAT3A8MTJ3 354 aa10.77□□□□□ -0.69
SMARCD3-215ENST00000496530 TEFQ10587 303 aa10.77□□□□□ -0.69
SMARCD3-215ENST00000496530 NEUROD2Q15784 382 aa10.77□□□□□ -0.69
SMARCD3-215ENST00000496530 TFCP2L1Q9NZI6 479 aa10.77□□□□□ -0.69
SMARCD3-215ENST00000496530 MAP3K5Q99683 1374 aa10.77□□□□□ -0.69
SMARCD3-215ENST00000496530 C5P01031 1676 aa10.76□□□□□ -0.69
SMARCD3-215ENST00000496530 RNMTO43148 476 aaKnown RBP10.76□□□□□ -0.69
SMARCD3-215ENST00000496530 ATP6V1AP38606 617 aa10.76□□□□□ -0.69
SMARCD3-215ENST00000496530 RBM42Q9BTD8 480 aaKnown RBP10.76□□□□□ -0.69
SMARCD3-215ENST00000496530 RSPH6AQ9H0K4 717 aa10.76□□□□□ -0.69
SMARCD3-215ENST00000496530 SPON1Q9HCB6 807 aa10.76□□□□□ -0.69
SMARCD3-215ENST00000496530 KDM6AO15550 1401 aaPredicted RBP10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 VIRMAQ69YN4 1812 aaKnown RBP10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 LOC102724428A0A0B4J2F2 783 aa10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 SIK1P57059 783 aa10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 TTC5Q8N0Z6 440 aa10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 NFATC2IPQ8NCF5 419 aa10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 FLAD1Q8NFF5 587 aa10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 AK7Q96M32 723 aa10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 SLC52A2Q9HAB3 445 aa10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 ANO8Q9HCE9 1232 aaPredicted RBP10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 LRRC4BQ9NT99 713 aa10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 PPP1R1BQ9UD71 204 aaPredicted RBP10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 LRP5O75197 1615 aa10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 PAPPAQ13219 1627 aa10.75□□□□□ -0.69
SMARCD3-215ENST00000496530 ATG3Q9NT62 314 aa10.74□□□□□ -0.69
SMARCD3-215ENST00000496530 ASAP1Q9ULH1 1129 aa10.74□□□□□ -0.69
SMARCD3-215ENST00000496530 QSER1Q2KHR3 1735 aa10.74□□□□□ -0.69
SMARCD3-215ENST00000496530 HTATSF1O43719 755 aaKnown RBP10.73□□□□□ -0.69
SMARCD3-215ENST00000496530 HNRNPUQ00839 825 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMARCD3-215ENST00000496530 SLC16A10Q8TF71 515 aa10.73□□□□□ -0.69
SMARCD3-215ENST00000496530 AKT1S1Q96B36 256 aa10.73□□□□□ -0.69
SMARCD3-215ENST00000496530 RUNDC1Q96C34 613 aa10.73□□□□□ -0.69
SMARCD3-215ENST00000496530 ZNF831Q5JPB2 1677 aa10.73□□□□□ -0.69
SMARCD3-215ENST00000496530 TAF1LQ8IZX4 1826 aa10.72□□□□□ -0.69
SMARCD3-215ENST00000496530 APAF1O14727 1248 aa10.72□□□□□ -0.69
SMARCD3-215ENST00000496530 KCNQ4P56696 695 aa10.72□□□□□ -0.69
SMARCD3-215ENST00000496530 MTFR1LQ9H019 292 aa10.72□□□□□ -0.69
SMARCD3-215ENST00000496530 LGR6Q9HBX8 967 aa10.72□□□□□ -0.69
SMARCD3-215ENST00000496530 RRP7AQ9Y3A4 280 aaKnown RBP10.72□□□□□ -0.69
SMARCD3-215ENST00000496530 MRC1P22897 1456 aa10.72□□□□□ -0.69
SMARCD3-215ENST00000496530 C4BP0C0L5 1744 aa10.72□□□□□ -0.69
SMARCD3-215ENST00000496530 PTCD1O75127 700 aaKnown RBP10.71□□□□□ -0.69
SMARCD3-215ENST00000496530 POLD1P28340 1107 aa10.71□□□□□ -0.69
SMARCD3-215ENST00000496530 LMOD3Q0VAK6 560 aa10.71□□□□□ -0.69
SMARCD3-215ENST00000496530 ZNF827Q17R98 1081 aa10.71□□□□□ -0.69
SMARCD3-215ENST00000496530 CASZ1Q86V15 1759 aa10.71□□□□□ -0.69
SMARCD3-215ENST00000496530 PHACTR3Q96KR7 559 aa10.71□□□□□ -0.69
SMARCD3-215ENST00000496530 ADAMTS7Q9UKP4 1686 aa10.71□□□□□ -0.69
SMARCD3-215ENST00000496530 ZBTB7AO95365 584 aa10.7□□□□□ -0.7
SMARCD3-215ENST00000496530 RIPK4P57078 832 aa10.7□□□□□ -0.7
SMARCD3-215ENST00000496530 PNPLA7Q6ZV29 1317 aa10.69□□□□□ -0.7
SMARCD3-215ENST00000496530 DCAF8L1A6NGE4 600 aa10.69□□□□□ -0.7
SMARCD3-215ENST00000496530 BTBD11A6QL63 1104 aa10.69□□□□□ -0.7
SMARCD3-215ENST00000496530 GNPATO15228 680 aa10.69□□□□□ -0.7
SMARCD3-215ENST00000496530 SSFA2P28290 1259 aa10.69□□□□□ -0.7
SMARCD3-215ENST00000496530 NFE2L2Q16236 605 aa10.69□□□□□ -0.7
SMARCD3-215ENST00000496530 NPM2Q86SE8 214 aaKnown RBP10.69□□□□□ -0.7
SMARCD3-215ENST00000496530 VSIG10Q8N0Z9 540 aa10.69□□□□□ -0.7
SMARCD3-215ENST00000496530 TEX13AQ9BXU3 409 aaPredicted RBP10.69□□□□□ -0.7
SMARCD3-215ENST00000496530 RTCBQ9Y3I0 505 aaKnown RBP10.69□□□□□ -0.7
SMARCD3-215ENST00000496530 CEMIPQ8WUJ3 1361 aa10.68□□□□□ -0.7
SMARCD3-215ENST00000496530 TUBGCP6Q96RT7 1819 aa10.68□□□□□ -0.7
SMARCD3-215ENST00000496530 PHF14O94880 888 aa10.68□□□□□ -0.7
SMARCD3-215ENST00000496530 RC3H1Q5TC82 1133 aaKnown RBP10.68□□□□□ -0.7
SMARCD3-215ENST00000496530 LINC00116Q8NCU8 138 aa10.68□□□□□ -0.7
SMARCD3-215ENST00000496530 IL17REQ8NFR9 667 aa10.68□□□□□ -0.7
SMARCD3-215ENST00000496530 PLEKHF1Q96S99 279 aa10.68□□□□□ -0.7
SMARCD3-215ENST00000496530 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
SMARCD3-215ENST00000496530 CNTNAP4Q9C0A0 1308 aa10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 DLG5Q8TDM6 1919 aa10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 STARD3NLO95772 234 aa10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 SLC39A6Q13433 755 aa10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 ITPK1Q13572 414 aa10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 TRAPPC3LQ5T215 181 aa10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 ZNF790Q6PG37 636 aa10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 MCM10Q7L590 875 aa10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 FMNL2Q96PY5 1086 aa10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 LAS1LQ9Y4W2 734 aaKnown RBP10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 SIPA1L3O60292 1781 aaPredicted RBP10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
SMARCD3-215ENST00000496530 CICQ96RK0 1608 aaPredicted RBP10.66□□□□□ -0.7
SMARCD3-215ENST00000496530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.66□□□□□ -0.7
SMARCD3-215ENST00000496530 TMPOP42166 694 aaKnown RBP10.66□□□□□ -0.7
SMARCD3-215ENST00000496530 TAF7Q15545 349 aaPredicted RBP10.66□□□□□ -0.7
SMARCD3-215ENST00000496530 COL23A1Q86Y22 540 aaPredicted RBP10.66□□□□□ -0.7
SMARCD3-215ENST00000496530 UBR3Q6ZT12 1888 aa10.66□□□□□ -0.7
SMARCD3-215ENST00000496530 UBR2Q8IWV8 1755 aa10.65□□□□□ -0.7
SMARCD3-215ENST00000496530 TJP1Q07157 1748 aa10.65□□□□□ -0.7
SMARCD3-215ENST00000496530 RPS6KA4O75676 772 aa10.65□□□□□ -0.7
SMARCD3-215ENST00000496530 RFC4P35249 363 aa10.65□□□□□ -0.7
SMARCD3-215ENST00000496530 CRKLP46109 303 aaKnown RBP10.65□□□□□ -0.7
SMARCD3-215ENST00000496530 ARXQ96QS3 562 aa10.65□□□□□ -0.7
SMARCD3-215ENST00000496530 PDGFDQ9GZP0 370 aaPredicted RBP10.65□□□□□ -0.7
SMARCD3-215ENST00000496530 KCPQ6ZWJ8 1503 aa10.64□□□□□ -0.71
SMARCD3-215ENST00000496530 DCTN1Q14203 1278 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms