RNA–Protein interactions for RNA: ENST00000495546.1

C2orf88-209, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 387 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-209ENST00000495546 TXNRD1Q16881 649 aa20.4■□□□□ 0.86
C2orf88-209ENST00000495546 SIPA1L3O60292 1781 aaPredicted RBP20.39■□□□□ 0.86
C2orf88-209ENST00000495546 NUP188Q5SRE5 1749 aa20.39■□□□□ 0.86
C2orf88-209ENST00000495546 PALLDQ8WX93 1383 aa20.39■□□□□ 0.85
C2orf88-209ENST00000495546 ATG3Q9NT62 314 aa20.39■□□□□ 0.85
C2orf88-209ENST00000495546 ASAP1Q9ULH1 1129 aa20.39■□□□□ 0.85
C2orf88-209ENST00000495546 MCM10Q7L590 875 aa20.38■□□□□ 0.85
C2orf88-209ENST00000495546 MIER1Q8N108 512 aa20.38■□□□□ 0.85
C2orf88-209ENST00000495546 SMARCC1Q92922 1105 aaPredicted RBP20.38■□□□□ 0.85
C2orf88-209ENST00000495546 PAPPAQ13219 1627 aa20.38■□□□□ 0.85
C2orf88-209ENST00000495546 RIPK4P57078 832 aa20.37■□□□□ 0.85
C2orf88-209ENST00000495546 DCTN1Q14203 1278 aa20.37■□□□□ 0.85
C2orf88-209ENST00000495546 RTF1Q92541 710 aaKnown RBP20.37■□□□□ 0.85
C2orf88-209ENST00000495546 SLC27A3Q5K4L6 730 aa20.36■□□□□ 0.85
C2orf88-209ENST00000495546 LRRC4BQ9NT99 713 aa20.36■□□□□ 0.85
C2orf88-209ENST00000495546 APAF1O14727 1248 aa20.35■□□□□ 0.85
C2orf88-209ENST00000495546 TEFQ10587 303 aa20.35■□□□□ 0.85
C2orf88-209ENST00000495546 RRP7AQ9Y3A4 280 aaKnown RBP20.35■□□□□ 0.85
C2orf88-209ENST00000495546 TRIM35Q9UPQ4 493 aa20.34■□□□□ 0.85
C2orf88-209ENST00000495546 ZNF831Q5JPB2 1677 aa20.33■□□□□ 0.85
C2orf88-209ENST00000495546 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
C2orf88-209ENST00000495546 LOC102724428A0A0B4J2F2 783 aa20.32■□□□□ 0.84
C2orf88-209ENST00000495546 SIK1P57059 783 aa20.32■□□□□ 0.84
C2orf88-209ENST00000495546 LMOD3Q0VAK6 560 aa20.32■□□□□ 0.84
C2orf88-209ENST00000495546 SLC4A9Q96Q91 983 aa20.32■□□□□ 0.84
C2orf88-209ENST00000495546 THUMPD2Q9BTF0 503 aaKnown RBP20.32■□□□□ 0.84
C2orf88-209ENST00000495546 CCNL1Q9UK58 526 aaPredicted RBP20.32■□□□□ 0.84
C2orf88-209ENST00000495546 KCPQ6ZWJ8 1503 aa20.32■□□□□ 0.84
C2orf88-209ENST00000495546 UBR2Q8IWV8 1755 aa20.31■□□□□ 0.84
C2orf88-209ENST00000495546 SLC39A6Q13433 755 aa20.31■□□□□ 0.84
C2orf88-209ENST00000495546 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
C2orf88-209ENST00000495546 CICQ96RK0 1608 aaPredicted RBP20.31■□□□□ 0.84
C2orf88-209ENST00000495546 KCNQ4P56696 695 aa20.3■□□□□ 0.84
C2orf88-209ENST00000495546 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
C2orf88-209ENST00000495546 ANO8Q9HCE9 1232 aaPredicted RBP20.3■□□□□ 0.84
C2orf88-209ENST00000495546 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
C2orf88-209ENST00000495546 ZNF790Q6PG37 636 aa20.29■□□□□ 0.84
C2orf88-209ENST00000495546 BTBD11A6QL63 1104 aa20.28■□□□□ 0.84
C2orf88-209ENST00000495546 ITPK1Q13572 414 aa20.28■□□□□ 0.84
C2orf88-209ENST00000495546 C5P01031 1676 aa20.28■□□□□ 0.84
C2orf88-209ENST00000495546 TAF1LQ8IZX4 1826 aa20.27■□□□□ 0.84
C2orf88-209ENST00000495546 AKT1S1Q96B36 256 aa20.27■□□□□ 0.84
C2orf88-209ENST00000495546 KCNQ3O43525 872 aa20.26■□□□□ 0.83
C2orf88-209ENST00000495546 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
C2orf88-209ENST00000495546 ATP6V1AP38606 617 aa20.26■□□□□ 0.83
C2orf88-209ENST00000495546 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
C2orf88-209ENST00000495546 RBM42Q9BTD8 480 aaKnown RBP20.26■□□□□ 0.83
C2orf88-209ENST00000495546 KDM3BQ7LBC6 1761 aa20.26■□□□□ 0.83
C2orf88-209ENST00000495546 TJP1Q07157 1748 aa20.25■□□□□ 0.83
C2orf88-209ENST00000495546 ZNF827Q17R98 1081 aa20.25■□□□□ 0.83
C2orf88-209ENST00000495546 NBPF14Q5TI25 921 aa20.25■□□□□ 0.83
C2orf88-209ENST00000495546 VSIG10Q8N0Z9 540 aa20.25■□□□□ 0.83
C2orf88-209ENST00000495546 LINC00116Q8NCU8 138 aa20.25■□□□□ 0.83
C2orf88-209ENST00000495546 ZNF496Q96IT1 587 aaPredicted RBP20.25■□□□□ 0.83
C2orf88-209ENST00000495546 HMGB2P26583 209 aaKnown RBP20.24■□□□□ 0.83
C2orf88-209ENST00000495546 SLC15A2Q16348 729 aa20.24■□□□□ 0.83
C2orf88-209ENST00000495546 TTC5Q8N0Z6 440 aa20.24■□□□□ 0.83
C2orf88-209ENST00000495546 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
C2orf88-209ENST00000495546 COL5A3P25940 1745 aaPredicted RBP20.24■□□□□ 0.83
C2orf88-209ENST00000495546 C4BP0C0L5 1744 aa20.23■□□□□ 0.83
C2orf88-209ENST00000495546 STK32BQ9NY57 414 aa20.23■□□□□ 0.83
C2orf88-209ENST00000495546 MIS18AQ9NYP9 233 aa20.23■□□□□ 0.83
C2orf88-209ENST00000495546 HEG1Q9ULI3 1381 aa20.22■□□□□ 0.83
C2orf88-209ENST00000495546 CHL1O00533 1208 aa20.21■□□□□ 0.83
C2orf88-209ENST00000495546 ZNF853P0CG23 659 aa20.21■□□□□ 0.83
C2orf88-209ENST00000495546 R3HDM1Q15032 1099 aaKnown RBP20.21■□□□□ 0.83
C2orf88-209ENST00000495546 WWC1Q8IX03 1113 aa20.21■□□□□ 0.83
C2orf88-209ENST00000495546 NGEFQ8N5V2 710 aa20.21■□□□□ 0.83
C2orf88-209ENST00000495546 FMNL2Q96PY5 1086 aa20.21■□□□□ 0.83
C2orf88-209ENST00000495546 SENP3-EIF4A1A0A087X0R7 540 aa20.2■□□□□ 0.82
C2orf88-209ENST00000495546 DNAJC10Q8IXB1 793 aa20.2■□□□□ 0.82
C2orf88-209ENST00000495546 CNTNAP4Q9C0A0 1308 aa20.2■□□□□ 0.82
C2orf88-209ENST00000495546 QSER1Q2KHR3 1735 aa20.19■□□□□ 0.82
C2orf88-209ENST00000495546 RC3H1Q5TC82 1133 aaKnown RBP20.19■□□□□ 0.82
C2orf88-209ENST00000495546 CFAP44Q96MT7 982 aa20.19■□□□□ 0.82
C2orf88-209ENST00000495546 TUBGCP6Q96RT7 1819 aa20.18■□□□□ 0.82
C2orf88-209ENST00000495546 PSDA5PKW4 1024 aaPredicted RBP20.18■□□□□ 0.82
C2orf88-209ENST00000495546 EIF4A1P60842 406 aaKnown RBP20.18■□□□□ 0.82
C2orf88-209ENST00000495546 TSPYL4Q9UJ04 414 aa20.18■□□□□ 0.82
C2orf88-209ENST00000495546 CYP19A1P11511 503 aaPredicted RBP20.17■□□□□ 0.82
C2orf88-209ENST00000495546 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
C2orf88-209ENST00000495546 IFT57Q9NWB7 429 aa20.17■□□□□ 0.82
C2orf88-209ENST00000495546 CASZ1Q86V15 1759 aa20.16■□□□□ 0.82
C2orf88-209ENST00000495546 UBR3Q6ZT12 1888 aa20.16■□□□□ 0.82
C2orf88-209ENST00000495546 MYH14Q7Z406 1995 aaKnown RBP20.16■□□□□ 0.82
C2orf88-209ENST00000495546 AMIGO3Q86WK7 504 aa20.16■□□□□ 0.82
C2orf88-209ENST00000495546 PNPLA7Q6ZV29 1317 aa20.16■□□□□ 0.82
C2orf88-209ENST00000495546 ZNF521Q96K83 1311 aa20.16■□□□□ 0.82
C2orf88-209ENST00000495546 SNRPA1P09661 255 aaKnown RBP20.15■□□□□ 0.82
C2orf88-209ENST00000495546 CRKLP46109 303 aaKnown RBP20.15■□□□□ 0.82
C2orf88-209ENST00000495546 GNAI1P63096 354 aa20.15■□□□□ 0.82
C2orf88-209ENST00000495546 INTS5Q6P9B9 1019 aaKnown RBP20.15■□□□□ 0.82
C2orf88-209ENST00000495546 AK7Q96M32 723 aa20.15■□□□□ 0.82
C2orf88-209ENST00000495546 TEX13AQ9BXU3 409 aaPredicted RBP20.15■□□□□ 0.82
C2orf88-209ENST00000495546 TFCP2L1Q9NZI6 479 aa20.15■□□□□ 0.82
C2orf88-209ENST00000495546 IL16Q14005 1332 aa20.15■□□□□ 0.82
C2orf88-209ENST00000495546 PRAMEF22A3QJZ6 481 aa20.14■□□□□ 0.81
C2orf88-209ENST00000495546 WDR63Q8IWG1 891 aa20.14■□□□□ 0.81
C2orf88-209ENST00000495546 PDGFDQ9GZP0 370 aaPredicted RBP20.14■□□□□ 0.81
C2orf88-209ENST00000495546 MBIPQ9NS73 344 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms