RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 SMC4Q9NTJ3 1288 aa19.97■□□□□ 0.79
SHISA5-216ENST00000494854 TNNQ9UQP3 1299 aa19.97■□□□□ 0.79
SHISA5-216ENST00000494854 RGPD3A6NKT7 1758 aaPredicted RBP19.97■□□□□ 0.79
SHISA5-216ENST00000494854 RGPD4Q7Z3J3 1758 aa19.97■□□□□ 0.79
SHISA5-216ENST00000494854 RLBP1P12271 317 aa19.96■□□□□ 0.79
SHISA5-216ENST00000494854 AAMPQ13685 434 aa19.96■□□□□ 0.79
SHISA5-216ENST00000494854 ZKSCAN2Q63HK3 967 aa19.96■□□□□ 0.79
SHISA5-216ENST00000494854 RREB1Q92766 1687 aa19.96■□□□□ 0.79
SHISA5-216ENST00000494854 SULT6B1Q6IMI4 303 aa19.96■□□□□ 0.79
SHISA5-216ENST00000494854 SKAP1Q86WV1 359 aa19.95■□□□□ 0.78
SHISA5-216ENST00000494854 AEBP1Q8IUX7 1158 aa19.95■□□□□ 0.78
SHISA5-216ENST00000494854 SSH1Q8WYL5 1049 aa19.95■□□□□ 0.78
SHISA5-216ENST00000494854 LAS1LQ9Y4W2 734 aaKnown RBP19.95■□□□□ 0.78
SHISA5-216ENST00000494854 THUMPD2Q9BTF0 503 aaKnown RBP19.94■□□□□ 0.78
SHISA5-216ENST00000494854 IFT57Q9NWB7 429 aa19.94■□□□□ 0.78
SHISA5-216ENST00000494854 GNAI1P63096 354 aa19.94■□□□□ 0.78
SHISA5-216ENST00000494854 PTF1AQ7RTS3 328 aa19.94■□□□□ 0.78
SHISA5-216ENST00000494854 DZIP1LQ8IYY4 767 aaKnown RBP19.92■□□□□ 0.78
SHISA5-216ENST00000494854 ZCRB1Q8TBF4 217 aaKnown RBP19.92■□□□□ 0.78
SHISA5-216ENST00000494854 NHSQ6T4R5 1651 aa19.92■□□□□ 0.78
SHISA5-216ENST00000494854 MEGF6O75095 1541 aa19.92■□□□□ 0.78
SHISA5-216ENST00000494854 ZNF853P0CG23 659 aa19.92■□□□□ 0.78
SHISA5-216ENST00000494854 PDE4AP27815 886 aa19.92■□□□□ 0.78
SHISA5-216ENST00000494854 ALDH1L2Q3SY69 923 aa19.92■□□□□ 0.78
SHISA5-216ENST00000494854 KAT6BQ8WYB5 2073 aa19.91■□□□□ 0.78
SHISA5-216ENST00000494854 NUP188Q5SRE5 1749 aa19.91■□□□□ 0.78
SHISA5-216ENST00000494854 MVPQ14764 893 aaKnown RBP19.91■□□□□ 0.78
SHISA5-216ENST00000494854 FTSJ3Q8IY81 847 aaKnown RBP19.91■□□□□ 0.78
SHISA5-216ENST00000494854 RAPGEF4Q8WZA2 1011 aa19.91■□□□□ 0.78
SHISA5-216ENST00000494854 ZNF428Q96B54 188 aa19.91■□□□□ 0.78
SHISA5-216ENST00000494854 NCAPD2Q15021 1401 aa19.91■□□□□ 0.78
SHISA5-216ENST00000494854 IGHDP01880 384 aa19.9■□□□□ 0.78
SHISA5-216ENST00000494854 KCNQ2O43526 872 aa19.9■□□□□ 0.78
SHISA5-216ENST00000494854 USHBP1Q8N6Y0 703 aa19.9■□□□□ 0.78
SHISA5-216ENST00000494854 DDX54Q8TDD1 881 aaKnown RBP19.9■□□□□ 0.78
SHISA5-216ENST00000494854 BACH2Q9BYV9 841 aa19.9■□□□□ 0.78
SHISA5-216ENST00000494854 KIF16BQ96L93 1317 aa19.89■□□□□ 0.77
SHISA5-216ENST00000494854 SHANK3Q9BYB0 1731 aa19.89■□□□□ 0.77
SHISA5-216ENST00000494854 MSH5O43196 834 aa19.89■□□□□ 0.77
SHISA5-216ENST00000494854 TRIM27P14373 513 aa19.89■□□□□ 0.77
SHISA5-216ENST00000494854 TATP17735 454 aaPredicted RBP19.89■□□□□ 0.77
SHISA5-216ENST00000494854 ATF7IPQ6VMQ6 1270 aa19.89■□□□□ 0.77
SHISA5-216ENST00000494854 CFAP44Q96MT7 982 aa19.89■□□□□ 0.77
SHISA5-216ENST00000494854 MBIPQ9NS73 344 aa19.89■□□□□ 0.77
SHISA5-216ENST00000494854 NBPF14Q5TI25 921 aa19.88■□□□□ 0.77
SHISA5-216ENST00000494854 NOB1Q9ULX3 412 aaKnown RBP19.88■□□□□ 0.77
SHISA5-216ENST00000494854 PSDA5PKW4 1024 aaPredicted RBP19.88■□□□□ 0.77
SHISA5-216ENST00000494854 R3HDM1Q15032 1099 aaKnown RBP19.87■□□□□ 0.77
SHISA5-216ENST00000494854 PROM2Q8N271 834 aa19.87■□□□□ 0.77
SHISA5-216ENST00000494854 ACSBG1Q96GR2 724 aa19.87■□□□□ 0.77
SHISA5-216ENST00000494854 DCTN1Q14203 1278 aa19.86■□□□□ 0.77
SHISA5-216ENST00000494854 IPO8O15397 1037 aaKnown RBP19.86■□□□□ 0.77
SHISA5-216ENST00000494854 VAMP4O75379 141 aa19.86■□□□□ 0.77
SHISA5-216ENST00000494854 BRPF1P55201 1214 aaPredicted RBP19.86■□□□□ 0.77
SHISA5-216ENST00000494854 EYA1Q99502 592 aa19.86■□□□□ 0.77
SHISA5-216ENST00000494854 SRCAPQ6ZRS2 3230 aa19.86■□□□□ 0.77
SHISA5-216ENST00000494854 KDRP35968 1356 aa19.86■□□□□ 0.77
SHISA5-216ENST00000494854 PCDHB15Q9Y5E8 787 aa19.85■□□□□ 0.77
SHISA5-216ENST00000494854 IGSF1Q8N6C5 1336 aa19.85■□□□□ 0.77
SHISA5-216ENST00000494854 BTAF1O14981 1849 aa19.85■□□□□ 0.77
SHISA5-216ENST00000494854 TXNRD1Q16881 649 aa19.84■□□□□ 0.77
SHISA5-216ENST00000494854 TSPYL6Q8N831 410 aa19.84■□□□□ 0.77
SHISA5-216ENST00000494854 ANP32AP39687 249 aaKnown RBP19.83■□□□□ 0.77
SHISA5-216ENST00000494854 DDX19BQ9UMR2 479 aa19.83■□□□□ 0.77
SHISA5-216ENST00000494854 PCDH11XQ9BZA7 1347 aa19.83■□□□□ 0.76
SHISA5-216ENST00000494854 PCDH11YQ9BZA8 1340 aa19.83■□□□□ 0.76
SHISA5-216ENST00000494854 PLEKHG2Q9H7P9 1386 aa19.83■□□□□ 0.76
SHISA5-216ENST00000494854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHISA5-216ENST00000494854 RGS3P49796 1198 aa19.82■□□□□ 0.76
SHISA5-216ENST00000494854 TWISTNBQ3B726 338 aaPredicted RBP19.82■□□□□ 0.76
SHISA5-216ENST00000494854 PKD1L3Q7Z443 1732 aa19.82■□□□□ 0.76
SHISA5-216ENST00000494854 ITPRIPQ8IWB1 547 aa19.82■□□□□ 0.76
SHISA5-216ENST00000494854 LRP5O75197 1615 aa19.82■□□□□ 0.76
SHISA5-216ENST00000494854 MRPL50Q8N5N7 158 aaKnown RBP19.81■□□□□ 0.76
SHISA5-216ENST00000494854 PRIM1P49642 420 aaKnown RBP19.8■□□□□ 0.76
SHISA5-216ENST00000494854 TMEM57Q8N5G2 664 aa19.8■□□□□ 0.76
SHISA5-216ENST00000494854 DOT1LQ8TEK3 1739 aa19.8■□□□□ 0.76
SHISA5-216ENST00000494854 ELL2O00472 640 aaPredicted RBP19.8■□□□□ 0.76
SHISA5-216ENST00000494854 MCM10Q7L590 875 aa19.8■□□□□ 0.76
SHISA5-216ENST00000494854 C8orf58Q8NAV2 365 aa19.8■□□□□ 0.76
SHISA5-216ENST00000494854 RWDD1Q9H446 243 aaPredicted RBP19.8■□□□□ 0.76
SHISA5-216ENST00000494854 CYP27B1O15528 508 aa19.79■□□□□ 0.76
SHISA5-216ENST00000494854 MTHFSDQ2M296 383 aaKnown RBP19.79■□□□□ 0.76
SHISA5-216ENST00000494854 SPG7Q9UQ90 795 aa19.79■□□□□ 0.76
SHISA5-216ENST00000494854 VIRMAQ69YN4 1812 aaKnown RBP19.79■□□□□ 0.76
SHISA5-216ENST00000494854 CHL1O00533 1208 aa19.78■□□□□ 0.76
SHISA5-216ENST00000494854 ARHGAP45Q92619 1136 aa19.78■□□□□ 0.76
SHISA5-216ENST00000494854 NKX1-1Q15270 411 aaPredicted RBP19.77■□□□□ 0.76
SHISA5-216ENST00000494854 FAM161AQ3B820 660 aa19.77■□□□□ 0.76
SHISA5-216ENST00000494854 GAS2L2Q8NHY3 880 aa19.77■□□□□ 0.76
SHISA5-216ENST00000494854 SYTL4Q96C24 671 aaPredicted RBP19.76■□□□□ 0.75
SHISA5-216ENST00000494854 ANO8Q9HCE9 1232 aaPredicted RBP19.76■□□□□ 0.75
SHISA5-216ENST00000494854 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
SHISA5-216ENST00000494854 RTF1Q92541 710 aaKnown RBP19.75■□□□□ 0.75
SHISA5-216ENST00000494854 IPO9Q96P70 1041 aaKnown RBP19.74■□□□□ 0.75
SHISA5-216ENST00000494854 ANP32EQ9BTT0 268 aa19.74■□□□□ 0.75
SHISA5-216ENST00000494854 ZBTB40Q9NUA8 1239 aa19.74■□□□□ 0.75
SHISA5-216ENST00000494854 SLC15A2Q16348 729 aa19.74■□□□□ 0.75
SHISA5-216ENST00000494854 C8orf34Q49A92 452 aa19.74■□□□□ 0.75
SHISA5-216ENST00000494854 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms