RNA–Protein interactions for RNA: ENST00000494843.5

ACTL6A-214, Transcript of actin like 6A, humanhuman

TSL 2

Gene ACTL6A, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-214ENST00000494843 NCKAP5LQ9HCH0 1330 aa8.66□□□□□ -1.02
ACTL6A-214ENST00000494843 HOXB1P14653 301 aaPredicted RBP8.66□□□□□ -1.02
ACTL6A-214ENST00000494843 CALD1Q05682 793 aaKnown RBP8.66□□□□□ -1.02
ACTL6A-214ENST00000494843 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
ACTL6A-214ENST00000494843 SSH1Q8WYL5 1049 aa8.66□□□□□ -1.02
ACTL6A-214ENST00000494843 BCL2L13Q9BXK5 485 aa8.66□□□□□ -1.02
ACTL6A-214ENST00000494843 SMC4Q9NTJ3 1288 aa8.66□□□□□ -1.02
ACTL6A-214ENST00000494843 CACNA1FO60840 1977 aa8.66□□□□□ -1.02
ACTL6A-214ENST00000494843 NEFMP07197 916 aa8.65□□□□□ -1.02
ACTL6A-214ENST00000494843 ZNF853P0CG23 659 aa8.65□□□□□ -1.02
ACTL6A-214ENST00000494843 TRIM27P14373 513 aa8.65□□□□□ -1.02
ACTL6A-214ENST00000494843 LMOD3Q0VAK6 560 aa8.65□□□□□ -1.02
ACTL6A-214ENST00000494843 ATF7IPQ6VMQ6 1270 aa8.65□□□□□ -1.02
ACTL6A-214ENST00000494843 NPM2Q86SE8 214 aaKnown RBP8.65□□□□□ -1.02
ACTL6A-214ENST00000494843 IFT57Q9NWB7 429 aa8.65□□□□□ -1.02
ACTL6A-214ENST00000494843 PCDHB15Q9Y5E8 787 aa8.65□□□□□ -1.02
ACTL6A-214ENST00000494843 EID1Q9Y6B2 187 aa8.65□□□□□ -1.02
ACTL6A-214ENST00000494843 TRPM3Q9HCF6 1732 aaPredicted RBP8.65□□□□□ -1.03
ACTL6A-214ENST00000494843 LMO7Q8WWI1 1683 aa8.65□□□□□ -1.03
ACTL6A-214ENST00000494843 KDM3BQ7LBC6 1761 aa8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 PPP1R37O75864 691 aa8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 FBLN1P23142 703 aa8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 RGS3P49796 1198 aa8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 GNAI1P63096 354 aa8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 FTSJ3Q8IY81 847 aaKnown RBP8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 PHACTR3Q96KR7 559 aa8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 DDX19BQ9UMR2 479 aa8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 KIF1AQ12756 1690 aa8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 NFAT5O94916 1531 aa8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 TUBGCP6Q96RT7 1819 aa8.64□□□□□ -1.03
ACTL6A-214ENST00000494843 RGPD2P0DJD1 1756 aa8.63□□□□□ -1.03
ACTL6A-214ENST00000494843 SBNO1A3KN83 1393 aa8.63□□□□□ -1.03
ACTL6A-214ENST00000494843 FLT4P35916 1363 aa8.63□□□□□ -1.03
ACTL6A-214ENST00000494843 KDRP35968 1356 aa8.63□□□□□ -1.03
ACTL6A-214ENST00000494843 KIF24Q5T7B8 1368 aa8.63□□□□□ -1.03
ACTL6A-214ENST00000494843 ERBB3P21860 1342 aa8.63□□□□□ -1.03
ACTL6A-214ENST00000494843 HMOX1P09601 288 aa8.63□□□□□ -1.03
ACTL6A-214ENST00000494843 CEBPAP49715 358 aaPredicted RBP8.63□□□□□ -1.03
ACTL6A-214ENST00000494843 MED1Q15648 1581 aaPredicted RBP8.63□□□□□ -1.03
ACTL6A-214ENST00000494843 C2orf72A6NCS6 295 aa8.62□□□□□ -1.03
ACTL6A-214ENST00000494843 PPM1GO15355 546 aaPredicted RBP8.62□□□□□ -1.03
ACTL6A-214ENST00000494843 HDAC1Q13547 482 aaPredicted RBP8.62□□□□□ -1.03
ACTL6A-214ENST00000494843 EIF4A2Q14240 407 aaKnown RBP8.62□□□□□ -1.03
ACTL6A-214ENST00000494843 RRS1Q15050 365 aaKnown RBP8.62□□□□□ -1.03
ACTL6A-214ENST00000494843 THEMISQ8N1K5 641 aaPredicted RBP8.62□□□□□ -1.03
ACTL6A-214ENST00000494843 RWDD1Q9H446 243 aaPredicted RBP8.62□□□□□ -1.03
ACTL6A-214ENST00000494843 AMOTL2Q9Y2J4 779 aa8.62□□□□□ -1.03
ACTL6A-214ENST00000494843 ABCC4O15439 1325 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 USP19O94966 1318 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 SETD1BQ9UPS6 1966 aaKnown RBP8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 CRYBG1Q9Y4K1 1723 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 IPO8O15397 1037 aaKnown RBP8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 TMEM57Q8N5G2 664 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 ARHGAP45Q92619 1136 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 SLC26A8Q96RN1 970 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 NOB1Q9ULX3 412 aaKnown RBP8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 PDZRN3Q9UPQ7 1066 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 RGS12O14924 1447 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 ADGRL3Q9HAR2 1447 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 SIPA1L3O60292 1781 aaPredicted RBP8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 RTL1A6NKG5 1358 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 KIAA0232Q92628 1395 aa8.61□□□□□ -1.03
ACTL6A-214ENST00000494843 SLIT3O75094 1523 aa8.6□□□□□ -1.03
ACTL6A-214ENST00000494843 VAMP4O75379 141 aa8.6□□□□□ -1.03
ACTL6A-214ENST00000494843 ARSIQ5FYB1 569 aa8.6□□□□□ -1.03
ACTL6A-214ENST00000494843 SPNS2Q8IVW8 549 aa8.6□□□□□ -1.03
ACTL6A-214ENST00000494843 SMC5Q8IY18 1101 aa8.6□□□□□ -1.03
ACTL6A-214ENST00000494843 MRPL50Q8N5N7 158 aaKnown RBP8.6□□□□□ -1.03
ACTL6A-214ENST00000494843 MBIPQ9NS73 344 aa8.6□□□□□ -1.03
ACTL6A-214ENST00000494843 ZBTB40Q9NUA8 1239 aa8.6□□□□□ -1.03
ACTL6A-214ENST00000494843 CRB1P82279 1406 aa8.6□□□□□ -1.03
ACTL6A-214ENST00000494843 ALS2Q96Q42 1657 aa8.59□□□□□ -1.03
ACTL6A-214ENST00000494843 NKX1-1Q15270 411 aaPredicted RBP8.59□□□□□ -1.03
ACTL6A-214ENST00000494843 VARS2Q5ST30 1063 aaKnown RBP8.59□□□□□ -1.03
ACTL6A-214ENST00000494843 ITPRIPQ8IWB1 547 aa8.59□□□□□ -1.03
ACTL6A-214ENST00000494843 KHSRPQ92945 711 aaKnown RBP eCLIP8.59□□□□□ -1.035e-10■■□□□ 12.5
ACTL6A-214ENST00000494843 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
ACTL6A-214ENST00000494843 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
ACTL6A-214ENST00000494843 ADAMTS7Q9UKP4 1686 aa8.59□□□□□ -1.03
ACTL6A-214ENST00000494843 IGSF1Q8N6C5 1336 aa8.58□□□□□ -1.04
ACTL6A-214ENST00000494843 GPR153Q6NV75 609 aa8.58□□□□□ -1.04
ACTL6A-214ENST00000494843 AEBP1Q8IUX7 1158 aa8.58□□□□□ -1.04
ACTL6A-214ENST00000494843 TMC2Q8TDI7 906 aa8.58□□□□□ -1.04
ACTL6A-214ENST00000494843 THUMPD2Q9BTF0 503 aaKnown RBP8.58□□□□□ -1.04
ACTL6A-214ENST00000494843 CHMP4BQ9H444 224 aaKnown RBP8.58□□□□□ -1.04
ACTL6A-214ENST00000494843 ZSWIM6Q9HCJ5 1215 aa8.58□□□□□ -1.04
ACTL6A-214ENST00000494843 LMTK3Q96Q04 1460 aa8.57□□□□□ -1.04
ACTL6A-214ENST00000494843 MAP3K19Q56UN5 1328 aa8.57□□□□□ -1.04
ACTL6A-214ENST00000494843 KIF3CO14782 793 aa8.57□□□□□ -1.04
ACTL6A-214ENST00000494843 GTPBP6O43824 516 aaPredicted RBP8.57□□□□□ -1.04
ACTL6A-214ENST00000494843 TWISTNBQ3B726 338 aaPredicted RBP8.57□□□□□ -1.04
ACTL6A-214ENST00000494843 TSPYL6Q8N831 410 aa8.57□□□□□ -1.04
ACTL6A-214ENST00000494843 RGPD5Q99666 1765 aa8.57□□□□□ -1.04
ACTL6A-214ENST00000494843 ATP10DQ9P241 1426 aa8.56□□□□□ -1.04
ACTL6A-214ENST00000494843 MMRN1Q13201 1228 aa8.56□□□□□ -1.04
ACTL6A-214ENST00000494843 HSP90AB2PQ58FF8 381 aa8.56□□□□□ -1.04
ACTL6A-214ENST00000494843 SULT6B1Q6IMI4 303 aa8.56□□□□□ -1.04
ACTL6A-214ENST00000494843 PODXL2Q9NZ53 605 aa8.56□□□□□ -1.04
ACTL6A-214ENST00000494843 LAS1LQ9Y4W2 734 aaKnown RBP8.56□□□□□ -1.04
ACTL6A-214ENST00000494843 PXDNLA1KZ92 1463 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms