RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 HNRNPUQ00839 825 aaKnown RBP eCLIP12.62□□□□□ -0.39
CALCA-206ENST00000494746 CCDC27Q2M243 656 aa12.62□□□□□ -0.39
CALCA-206ENST00000494746 WWC1Q8IX03 1113 aa12.62□□□□□ -0.39
CALCA-206ENST00000494746 SLC52A2Q9HAB3 445 aa12.62□□□□□ -0.39
CALCA-206ENST00000494746 PAPPAQ13219 1627 aa12.61□□□□□ -0.39
CALCA-206ENST00000494746 TRIM37O94972 964 aa12.61□□□□□ -0.39
CALCA-206ENST00000494746 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
CALCA-206ENST00000494746 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
CALCA-206ENST00000494746 CABP4P57796 275 aa12.6□□□□□ -0.39
CALCA-206ENST00000494746 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
CALCA-206ENST00000494746 PIGBQ92521 554 aa12.6□□□□□ -0.39
CALCA-206ENST00000494746 TMOD3Q9NYL9 352 aa12.6□□□□□ -0.39
CALCA-206ENST00000494746 KDM3BQ7LBC6 1761 aa12.6□□□□□ -0.39
CALCA-206ENST00000494746 TEFQ10587 303 aa12.6□□□□□ -0.39
CALCA-206ENST00000494746 BCL11BQ9C0K0 894 aaPredicted RBP12.59□□□□□ -0.39
CALCA-206ENST00000494746 UBR2Q8IWV8 1755 aa12.59□□□□□ -0.39
CALCA-206ENST00000494746 NGEFQ8N5V2 710 aa12.58□□□□□ -0.4
CALCA-206ENST00000494746 MIS18AQ9NYP9 233 aa12.58□□□□□ -0.4
CALCA-206ENST00000494746 SLC39A6Q13433 755 aa12.57□□□□□ -0.4
CALCA-206ENST00000494746 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
CALCA-206ENST00000494746 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
CALCA-206ENST00000494746 KCPQ6ZWJ8 1503 aa12.56□□□□□ -0.4
CALCA-206ENST00000494746 LY75O60449 1722 aa12.56□□□□□ -0.4
CALCA-206ENST00000494746 BTBD11A6QL63 1104 aa12.56□□□□□ -0.4
CALCA-206ENST00000494746 TAF7Q15545 349 aaPredicted RBP12.56□□□□□ -0.4
CALCA-206ENST00000494746 ZBED9Q6R2W3 1325 aa12.56□□□□□ -0.4
CALCA-206ENST00000494746 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
CALCA-206ENST00000494746 ATG3Q9NT62 314 aa12.55□□□□□ -0.4
CALCA-206ENST00000494746 LAS1LQ9Y4W2 734 aaKnown RBP12.55□□□□□ -0.4
CALCA-206ENST00000494746 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
CALCA-206ENST00000494746 KCNQ3O43525 872 aa12.55□□□□□ -0.4
CALCA-206ENST00000494746 ZNF853P0CG23 659 aa12.55□□□□□ -0.4
CALCA-206ENST00000494746 CALD1Q05682 793 aaKnown RBP12.55□□□□□ -0.4
CALCA-206ENST00000494746 WDR63Q8IWG1 891 aa12.55□□□□□ -0.4
CALCA-206ENST00000494746 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
CALCA-206ENST00000494746 IFT57Q9NWB7 429 aa12.55□□□□□ -0.4
CALCA-206ENST00000494746 RGPD3A6NKT7 1758 aaPredicted RBP12.55□□□□□ -0.4
CALCA-206ENST00000494746 RGPD4Q7Z3J3 1758 aa12.55□□□□□ -0.4
CALCA-206ENST00000494746 CHL1O00533 1208 aa12.54□□□□□ -0.4
CALCA-206ENST00000494746 ZNF790Q6PG37 636 aa12.54□□□□□ -0.4
CALCA-206ENST00000494746 TSPYL4Q9UJ04 414 aa12.54□□□□□ -0.4
CALCA-206ENST00000494746 IL16Q14005 1332 aa12.54□□□□□ -0.4
CALCA-206ENST00000494746 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
CALCA-206ENST00000494746 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
CALCA-206ENST00000494746 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
CALCA-206ENST00000494746 C5P01031 1676 aa12.53□□□□□ -0.4
CALCA-206ENST00000494746 APBA3O96018 575 aa12.53□□□□□ -0.4
CALCA-206ENST00000494746 GNAI1P63096 354 aa12.53□□□□□ -0.4
CALCA-206ENST00000494746 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
CALCA-206ENST00000494746 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
CALCA-206ENST00000494746 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.4
CALCA-206ENST00000494746 TJP1Q07157 1748 aa12.52□□□□□ -0.4
CALCA-206ENST00000494746 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.41
CALCA-206ENST00000494746 TTC5Q8N0Z6 440 aa12.52□□□□□ -0.41
CALCA-206ENST00000494746 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
CALCA-206ENST00000494746 ZNF496Q96IT1 587 aaPredicted RBP12.52□□□□□ -0.41
CALCA-206ENST00000494746 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
CALCA-206ENST00000494746 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
CALCA-206ENST00000494746 BABAM1Q9NWV8 329 aa12.51□□□□□ -0.41
CALCA-206ENST00000494746 TAF1LQ8IZX4 1826 aa12.51□□□□□ -0.41
CALCA-206ENST00000494746 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
CALCA-206ENST00000494746 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
CALCA-206ENST00000494746 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
CALCA-206ENST00000494746 RREB1Q92766 1687 aa12.5□□□□□ -0.41
CALCA-206ENST00000494746 COL5A3P25940 1745 aaPredicted RBP12.5□□□□□ -0.41
CALCA-206ENST00000494746 LOC102724428A0A0B4J2F2 783 aa12.5□□□□□ -0.41
CALCA-206ENST00000494746 E9PSI1 815 aa12.5□□□□□ -0.41
CALCA-206ENST00000494746 PLSCR1O15162 318 aa12.5□□□□□ -0.41
CALCA-206ENST00000494746 KCNQ4P56696 695 aa12.5□□□□□ -0.41
CALCA-206ENST00000494746 SIK1P57059 783 aa12.5□□□□□ -0.41
CALCA-206ENST00000494746 EIF4A1P60842 406 aaKnown RBP12.5□□□□□ -0.41
CALCA-206ENST00000494746 SLFN5Q08AF3 891 aa12.5□□□□□ -0.41
CALCA-206ENST00000494746 DEFB132Q7Z7B7 95 aa12.5□□□□□ -0.41
CALCA-206ENST00000494746 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
CALCA-206ENST00000494746 HEG1Q9ULI3 1381 aa12.5□□□□□ -0.41
CALCA-206ENST00000494746 LAMB4A4D0S4 1761 aa12.5□□□□□ -0.41
CALCA-206ENST00000494746 EN1Q05925 392 aaPredicted RBP12.49□□□□□ -0.41
CALCA-206ENST00000494746 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
CALCA-206ENST00000494746 PROM2Q8N271 834 aa12.49□□□□□ -0.41
CALCA-206ENST00000494746 FMNL2Q96PY5 1086 aa12.49□□□□□ -0.41
CALCA-206ENST00000494746 SRCAPQ6ZRS2 3230 aa12.49□□□□□ -0.41
CALCA-206ENST00000494746 PRAMEF22A3QJZ6 481 aa12.48□□□□□ -0.41
CALCA-206ENST00000494746 CCDC125Q86Z20 511 aa12.48□□□□□ -0.41
CALCA-206ENST00000494746 MYH16Q9H6N6 1097 aa12.48□□□□□ -0.41
CALCA-206ENST00000494746 LRRC4BQ9NT99 713 aa12.48□□□□□ -0.41
CALCA-206ENST00000494746 NUP188Q5SRE5 1749 aa12.48□□□□□ -0.41
CALCA-206ENST00000494746 MYH14Q7Z406 1995 aaKnown RBP12.48□□□□□ -0.41
CALCA-206ENST00000494746 BAG6P46379 1132 aa12.48□□□□□ -0.41
CALCA-206ENST00000494746 EZH2Q15910 746 aaKnown RBP12.48□□□□□ -0.41
CALCA-206ENST00000494746 TXNRD1Q16881 649 aa12.48□□□□□ -0.41
CALCA-206ENST00000494746 DUSP27Q5VZP5 1158 aa12.48□□□□□ -0.41
CALCA-206ENST00000494746 TRMT2AQ8IZ69 625 aaKnown RBP12.48□□□□□ -0.41
CALCA-206ENST00000494746 CAMKK2Q96RR4 588 aa12.48□□□□□ -0.41
CALCA-206ENST00000494746 CCNL1Q9UK58 526 aaPredicted RBP12.48□□□□□ -0.41
CALCA-206ENST00000494746 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
CALCA-206ENST00000494746 ITPK1Q13572 414 aa12.47□□□□□ -0.41
CALCA-206ENST00000494746 C8orf58Q8NAV2 365 aa12.47□□□□□ -0.41
CALCA-206ENST00000494746 GIGYF1O75420 1035 aaPredicted RBP12.46□□□□□ -0.41
CALCA-206ENST00000494746 TSPYL6Q8N831 410 aa12.46□□□□□ -0.41
CALCA-206ENST00000494746 C4BP0C0L5 1744 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms