RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 TRIM37O94972 964 aa7.22□□□□□ -1.25
SRPRB-205ENST00000494297 SF3B2Q13435 895 aaKnown RBP7.22□□□□□ -1.25
SRPRB-205ENST00000494297 PLEKHO1Q53GL0 409 aaPredicted RBP7.22□□□□□ -1.25
SRPRB-205ENST00000494297 BCL11BQ9C0K0 894 aaPredicted RBP7.22□□□□□ -1.25
SRPRB-205ENST00000494297 BMP2KQ9NSY1 1161 aaPredicted RBP7.22□□□□□ -1.25
SRPRB-205ENST00000494297 NUDCQ9Y266 331 aa7.22□□□□□ -1.25
SRPRB-205ENST00000494297 COL3A1P02461 1466 aaPredicted RBP7.22□□□□□ -1.25
SRPRB-205ENST00000494297 MYBBP1AQ9BQG0 1328 aaKnown RBP7.22□□□□□ -1.25
SRPRB-205ENST00000494297 PCDH11XQ9BZA7 1347 aa7.22□□□□□ -1.25
SRPRB-205ENST00000494297 PCDH11YQ9BZA8 1340 aa7.22□□□□□ -1.25
SRPRB-205ENST00000494297 WNK3Q9BYP7 1800 aa7.22□□□□□ -1.25
SRPRB-205ENST00000494297 RGPD2P0DJD1 1756 aa7.21□□□□□ -1.25
SRPRB-205ENST00000494297 PLSCR1O15162 318 aa7.21□□□□□ -1.26
SRPRB-205ENST00000494297 CYP27B1O15528 508 aa7.21□□□□□ -1.26
SRPRB-205ENST00000494297 FCHSD2O94868 740 aa7.21□□□□□ -1.26
SRPRB-205ENST00000494297 AEBP1Q8IUX7 1158 aa7.21□□□□□ -1.26
SRPRB-205ENST00000494297 IFNL2Q8IZJ0 200 aa7.21□□□□□ -1.26
SRPRB-205ENST00000494297 FAM212AQ96EL1 285 aa7.21□□□□□ -1.26
SRPRB-205ENST00000494297 PCDHB13Q9Y5F0 798 aa7.21□□□□□ -1.26
SRPRB-205ENST00000494297 U2SURPO15042 1029 aaKnown RBP7.2□□□□□ -1.26
SRPRB-205ENST00000494297 SEC24BO95487 1268 aa7.2□□□□□ -1.26
SRPRB-205ENST00000494297 APBA3O96018 575 aa7.2□□□□□ -1.26
SRPRB-205ENST00000494297 HMOX1P09601 288 aa7.2□□□□□ -1.26
SRPRB-205ENST00000494297 PHKG2P15735 406 aa7.2□□□□□ -1.26
SRPRB-205ENST00000494297 BAG6P46379 1132 aa7.2□□□□□ -1.26
SRPRB-205ENST00000494297 MMRN1Q13201 1228 aa7.2□□□□□ -1.26
SRPRB-205ENST00000494297 CAMKK2Q96RR4 588 aa7.2□□□□□ -1.26
SRPRB-205ENST00000494297 SCUBE2Q9NQ36 999 aa7.2□□□□□ -1.26
SRPRB-205ENST00000494297 RGPD1P0DJD0 1748 aa7.2□□□□□ -1.26
SRPRB-205ENST00000494297 KCNQ2O43526 872 aa7.19□□□□□ -1.26
SRPRB-205ENST00000494297 HSP90AB1P08238 724 aaKnown RBP7.19□□□□□ -1.26
SRPRB-205ENST00000494297 PRIM1P49642 420 aaKnown RBP7.19□□□□□ -1.26
SRPRB-205ENST00000494297 DCAF8Q5TAQ9 597 aa7.19□□□□□ -1.26
SRPRB-205ENST00000494297 PTF1AQ7RTS3 328 aa7.19□□□□□ -1.26
SRPRB-205ENST00000494297 DEFB132Q7Z7B7 95 aa7.19□□□□□ -1.26
SRPRB-205ENST00000494297 ACSBG1Q96GR2 724 aa7.19□□□□□ -1.26
SRPRB-205ENST00000494297 RSPH6AQ9H0K4 717 aa7.19□□□□□ -1.26
SRPRB-205ENST00000494297 ANP32CO43423 234 aa7.18□□□□□ -1.26
SRPRB-205ENST00000494297 U2AF1L5P0DN76 240 aaPredicted RBP7.18□□□□□ -1.26
SRPRB-205ENST00000494297 NUBP1P53384 320 aa7.18□□□□□ -1.26
SRPRB-205ENST00000494297 U2AF1Q01081 240 aaKnown RBP eCLIP7.18□□□□□ -1.26
SRPRB-205ENST00000494297 EN1Q05925 392 aaPredicted RBP7.18□□□□□ -1.26
SRPRB-205ENST00000494297 MTHFSDQ2M296 383 aaKnown RBP7.18□□□□□ -1.26
SRPRB-205ENST00000494297 AKAP4Q5JQC9 854 aa7.18□□□□□ -1.26
SRPRB-205ENST00000494297 KLHL34Q8N239 644 aa7.18□□□□□ -1.26
SRPRB-205ENST00000494297 DCAF5Q96JK2 942 aa7.18□□□□□ -1.26
SRPRB-205ENST00000494297 PNNQ9H307 717 aaKnown RBP7.18□□□□□ -1.26
SRPRB-205ENST00000494297 ERVV-2B6SEH9 535 aa7.17□□□□□ -1.26
SRPRB-205ENST00000494297 PRKAR2BP31323 418 aa7.17□□□□□ -1.26
SRPRB-205ENST00000494297 EZH2Q15910 746 aaKnown RBP7.17□□□□□ -1.26
SRPRB-205ENST00000494297 C1orf141Q5JVX7 400 aa7.17□□□□□ -1.26
SRPRB-205ENST00000494297 ZNF530Q6P9A1 599 aaPredicted RBP7.17□□□□□ -1.26
SRPRB-205ENST00000494297 GAS2L2Q8NHY3 880 aa7.17□□□□□ -1.26
SRPRB-205ENST00000494297 PHACTR3Q96KR7 559 aa7.17□□□□□ -1.26
SRPRB-205ENST00000494297 PLEKHF1Q96S99 279 aa7.17□□□□□ -1.26
SRPRB-205ENST00000494297 FBXO3Q9UK99 471 aa7.17□□□□□ -1.26
SRPRB-205ENST00000494297 PKD1L3Q7Z443 1732 aa7.17□□□□□ -1.26
SRPRB-205ENST00000494297 SHANK3Q9BYB0 1731 aa7.17□□□□□ -1.26
SRPRB-205ENST00000494297 TTLL13PA6NNM8 815 aa7.16□□□□□ -1.26
SRPRB-205ENST00000494297 TIE1P35590 1138 aa7.16□□□□□ -1.26
SRPRB-205ENST00000494297 SYTL4Q96C24 671 aaPredicted RBP7.16□□□□□ -1.26
SRPRB-205ENST00000494297 EP400Q96L91 3159 aa7.15□□□□□ -1.26
SRPRB-205ENST00000494297 GNAT3A8MTJ3 354 aa7.15□□□□□ -1.26
SRPRB-205ENST00000494297 RNMTO43148 476 aaKnown RBP7.15□□□□□ -1.26
SRPRB-205ENST00000494297 HTATSF1O43719 755 aaKnown RBP7.15□□□□□ -1.26
SRPRB-205ENST00000494297 SLC27A3Q5K4L6 730 aa7.15□□□□□ -1.26
SRPRB-205ENST00000494297 MPRIPQ6WCQ1 1025 aa7.15□□□□□ -1.26
SRPRB-205ENST00000494297 PIGBQ92521 554 aa7.15□□□□□ -1.26
SRPRB-205ENST00000494297 LGR6Q9HBX8 967 aa7.15□□□□□ -1.26
SRPRB-205ENST00000494297 TNS1Q9HBL0 1735 aaKnown RBP7.15□□□□□ -1.27
SRPRB-205ENST00000494297 SBF2Q86WG5 1849 aa7.15□□□□□ -1.27
SRPRB-205ENST00000494297 KDM6AO15550 1401 aaPredicted RBP7.14□□□□□ -1.27
SRPRB-205ENST00000494297 NEFMP07197 916 aa7.14□□□□□ -1.27
SRPRB-205ENST00000494297 PYGBP11216 843 aa7.14□□□□□ -1.27
SRPRB-205ENST00000494297 HMGB2P26583 209 aaKnown RBP7.14□□□□□ -1.27
SRPRB-205ENST00000494297 CABP4P57796 275 aa7.14□□□□□ -1.27
SRPRB-205ENST00000494297 TXNRD1Q16881 649 aa7.14□□□□□ -1.27
SRPRB-205ENST00000494297 NHSQ6T4R5 1651 aa7.14□□□□□ -1.27
SRPRB-205ENST00000494297 IFNL1Q8IU54 200 aa7.14□□□□□ -1.27
SRPRB-205ENST00000494297 IL17REQ8NFR9 667 aa7.14□□□□□ -1.27
SRPRB-205ENST00000494297 SMARCC1Q92922 1105 aaPredicted RBP7.14□□□□□ -1.27
SRPRB-205ENST00000494297 TMOD3Q9NYL9 352 aa7.14□□□□□ -1.27
SRPRB-205ENST00000494297 ADAMTS8Q9UP79 889 aa7.14□□□□□ -1.27
SRPRB-205ENST00000494297 TRIM35Q9UPQ4 493 aa7.14□□□□□ -1.27
SRPRB-205ENST00000494297 WDR43Q15061 677 aaKnown RBP eCLIP7.13□□□□□ -1.27
SRPRB-205ENST00000494297 CCDC184Q52MB2 194 aa7.13□□□□□ -1.27
SRPRB-205ENST00000494297 NBPF14Q5TI25 921 aa7.13□□□□□ -1.27
SRPRB-205ENST00000494297 SPNS2Q8IVW8 549 aa7.13□□□□□ -1.27
SRPRB-205ENST00000494297 NFATC2IPQ8NCF5 419 aa7.13□□□□□ -1.27
SRPRB-205ENST00000494297 PNISRQ8TF01 805 aaKnown RBP7.13□□□□□ -1.27
SRPRB-205ENST00000494297 RUNDC1Q96C34 613 aa7.13□□□□□ -1.27
SRPRB-205ENST00000494297 TMEM106CQ9BVX2 250 aa7.13□□□□□ -1.27
SRPRB-205ENST00000494297 SLC52A2Q9HAB3 445 aa7.13□□□□□ -1.27
SRPRB-205ENST00000494297 ATG3Q9NT62 314 aa7.13□□□□□ -1.27
SRPRB-205ENST00000494297 LRRC4BQ9NT99 713 aa7.13□□□□□ -1.27
SRPRB-205ENST00000494297 CEMIPQ8WUJ3 1361 aa7.12□□□□□ -1.27
SRPRB-205ENST00000494297 MAP3K5Q99683 1374 aa7.12□□□□□ -1.27
SRPRB-205ENST00000494297 NFE2L2Q16236 605 aa7.12□□□□□ -1.27
SRPRB-205ENST00000494297 ASAP1Q9ULH1 1129 aa7.12□□□□□ -1.27
SRPRB-205ENST00000494297 RGPD3A6NKT7 1758 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms