RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 TCEANC2Q96MN5 208 aa13.35□□□□□ -0.27
COL2A1-208ENST00000493991 APPP05067 770 aa13.34□□□□□ -0.27
COL2A1-208ENST00000493991 FBXW7Q969H0 707 aa13.34□□□□□ -0.27
COL2A1-208ENST00000493991 GDPD2Q9HCC8 539 aa13.34□□□□□ -0.27
COL2A1-208ENST00000493991 EFCAB6Q5THR3 1501 aa13.34□□□□□ -0.27
COL2A1-208ENST00000493991 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
COL2A1-208ENST00000493991 BMP2KLQ5H9B9 411 aa13.34□□□□□ -0.27
COL2A1-208ENST00000493991 KLHDC4Q8TBB5 520 aa13.34□□□□□ -0.27
COL2A1-208ENST00000493991 CHL1O00533 1208 aa13.34□□□□□ -0.27
COL2A1-208ENST00000493991 ZKSCAN1P17029 563 aaPredicted RBP13.34□□□□□ -0.27
COL2A1-208ENST00000493991 IL17REQ8NFR9 667 aa13.34□□□□□ -0.27
COL2A1-208ENST00000493991 PLXNC1O60486 1568 aa13.34□□□□□ -0.27
COL2A1-208ENST00000493991 ANKRD44Q8N8A2 993 aa13.33□□□□□ -0.27
COL2A1-208ENST00000493991 HDAC5Q9UQL6 1122 aa13.33□□□□□ -0.27
COL2A1-208ENST00000493991 FLT4P35916 1363 aa13.33□□□□□ -0.28
COL2A1-208ENST00000493991 PNMA6EA0A0J9YXQ4 647 aa13.33□□□□□ -0.28
COL2A1-208ENST00000493991 CHMP4CQ96CF2 233 aa13.33□□□□□ -0.28
COL2A1-208ENST00000493991 CLASP1Q7Z460 1538 aa13.33□□□□□ -0.28
COL2A1-208ENST00000493991 WASHC4Q2M389 1173 aa13.33□□□□□ -0.28
COL2A1-208ENST00000493991 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
COL2A1-208ENST00000493991 CNTROBQ8N137 903 aa13.33□□□□□ -0.28
COL2A1-208ENST00000493991 RABEP1Q15276 862 aa13.32□□□□□ -0.28
COL2A1-208ENST00000493991 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
COL2A1-208ENST00000493991 PLEKHM2Q8IWE5 1019 aa13.32□□□□□ -0.28
COL2A1-208ENST00000493991 MSH6P52701 1360 aa13.32□□□□□ -0.28
COL2A1-208ENST00000493991 UNC13BO14795 1591 aa13.32□□□□□ -0.28
COL2A1-208ENST00000493991 FIBPO43427 364 aa13.32□□□□□ -0.28
COL2A1-208ENST00000493991 GPTP24298 496 aa13.32□□□□□ -0.28
COL2A1-208ENST00000493991 MYOM2P54296 1465 aa13.32□□□□□ -0.28
COL2A1-208ENST00000493991 ZRSR1Q15695 479 aaKnown RBP13.31□□□□□ -0.28
COL2A1-208ENST00000493991 COPS6Q7L5N1 327 aa13.31□□□□□ -0.28
COL2A1-208ENST00000493991 PRDM10Q9NQV6 1147 aa13.31□□□□□ -0.28
COL2A1-208ENST00000493991 KDM5AP29375 1690 aaKnown RBP13.31□□□□□ -0.28
COL2A1-208ENST00000493991 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
COL2A1-208ENST00000493991 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
COL2A1-208ENST00000493991 NBPF7P0C2Y1 421 aaPredicted RBP13.31□□□□□ -0.28
COL2A1-208ENST00000493991 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
COL2A1-208ENST00000493991 MAPK8IP2Q13387 824 aaPredicted RBP13.31□□□□□ -0.28
COL2A1-208ENST00000493991 TTC22Q5TAA0 569 aa13.31□□□□□ -0.28
COL2A1-208ENST00000493991 FERMT3Q86UX7 667 aa13.31□□□□□ -0.28
COL2A1-208ENST00000493991 ARHGAP45Q92619 1136 aa13.31□□□□□ -0.28
COL2A1-208ENST00000493991 RNF17Q9BXT8 1623 aaKnown RBP13.31□□□□□ -0.28
COL2A1-208ENST00000493991 PDE1AP54750 535 aa13.31□□□□□ -0.28
COL2A1-208ENST00000493991 DBF4Q9UBU7 674 aaPredicted RBP13.31□□□□□ -0.28
COL2A1-208ENST00000493991 SMC3Q9UQE7 1217 aa13.31□□□□□ -0.28
COL2A1-208ENST00000493991 FKBP4Q02790 459 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL2A1-208ENST00000493991 RUFY2Q8WXA3 655 aa13.3□□□□□ -0.28
COL2A1-208ENST00000493991 TNPO1Q92973 898 aaKnown RBP13.3□□□□□ -0.28
COL2A1-208ENST00000493991 CHAMP1Q96JM3 812 aa13.3□□□□□ -0.28
COL2A1-208ENST00000493991 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
COL2A1-208ENST00000493991 PLEKHG3A1L390 1219 aa13.3□□□□□ -0.28
COL2A1-208ENST00000493991 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
COL2A1-208ENST00000493991 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
COL2A1-208ENST00000493991 NDUFB9Q9Y6M9 179 aa13.3□□□□□ -0.28
COL2A1-208ENST00000493991 DCTPP1Q9H773 170 aa13.3□□□□□ -0.28
COL2A1-208ENST00000493991 USP19O94966 1318 aa13.3□□□□□ -0.28
COL2A1-208ENST00000493991 A0A087WZG4 1122 aa13.29□□□□□ -0.28
COL2A1-208ENST00000493991 SNRKQ9NRH2 765 aa13.29□□□□□ -0.28
COL2A1-208ENST00000493991 ISY1Q9ULR0 285 aaKnown RBP13.29□□□□□ -0.28
COL2A1-208ENST00000493991 PTPRCP08575 1304 aa13.29□□□□□ -0.28
COL2A1-208ENST00000493991 MADDQ8WXG6 1647 aa13.29□□□□□ -0.28
COL2A1-208ENST00000493991 CPA1P15085 419 aa13.29□□□□□ -0.28
COL2A1-208ENST00000493991 HECW2Q9P2P5 1572 aa13.29□□□□□ -0.28
COL2A1-208ENST00000493991 GNL2Q13823 731 aaKnown RBP13.29□□□□□ -0.28
COL2A1-208ENST00000493991 PRPF40BQ6NWY9 871 aaKnown RBP13.29□□□□□ -0.28
COL2A1-208ENST00000493991 SIRT2Q8IXJ6 389 aa13.29□□□□□ -0.28
COL2A1-208ENST00000493991 DRC7Q8IY82 874 aa13.29□□□□□ -0.28
COL2A1-208ENST00000493991 JAKMIP1Q96N16 626 aaKnown RBP13.29□□□□□ -0.28
COL2A1-208ENST00000493991 TET3O43151 1660 aa13.28□□□□□ -0.28
COL2A1-208ENST00000493991 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
COL2A1-208ENST00000493991 H3BQV1 296 aa13.28□□□□□ -0.28
COL2A1-208ENST00000493991 IFFO2Q5TF58 517 aa13.28□□□□□ -0.28
COL2A1-208ENST00000493991 ZGPATQ8N5A5 531 aaKnown RBP13.28□□□□□ -0.28
COL2A1-208ENST00000493991 RHPN1Q8TCX5 695 aa13.28□□□□□ -0.28
COL2A1-208ENST00000493991 KIF1BPQ96EK5 621 aa13.28□□□□□ -0.28
COL2A1-208ENST00000493991 FAM184AQ8NB25 1140 aa13.27□□□□□ -0.28
COL2A1-208ENST00000493991 SETD1BQ9UPS6 1966 aaKnown RBP13.27□□□□□ -0.28
COL2A1-208ENST00000493991 SYNMO15061 1565 aa13.27□□□□□ -0.28
COL2A1-208ENST00000493991 NUCB2P80303 420 aa13.27□□□□□ -0.29
COL2A1-208ENST00000493991 CASTP20810 708 aaKnown RBP13.27□□□□□ -0.29
COL2A1-208ENST00000493991 IP6K1Q92551 441 aa13.27□□□□□ -0.29
COL2A1-208ENST00000493991 AMOTQ4VCS5 1084 aa13.26□□□□□ -0.29
COL2A1-208ENST00000493991 BICDL1Q6ZP65 573 aa13.26□□□□□ -0.29
COL2A1-208ENST00000493991 ZFYVE9O95405 1425 aa13.26□□□□□ -0.29
COL2A1-208ENST00000493991 KIF1BO60333 1816 aa13.26□□□□□ -0.29
COL2A1-208ENST00000493991 CEP152O94986 1710 aa13.26□□□□□ -0.29
COL2A1-208ENST00000493991 ABCA6Q8N139 1617 aa13.26□□□□□ -0.29
COL2A1-208ENST00000493991 DDX11Q96FC9 970 aa13.25□□□□□ -0.29
COL2A1-208ENST00000493991 GSPT1P15170 499 aaKnown RBP13.25□□□□□ -0.29
COL2A1-208ENST00000493991 PROSER3Q2NL68 480 aa13.25□□□□□ -0.29
COL2A1-208ENST00000493991 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
COL2A1-208ENST00000493991 CCDC83Q8IWF9 413 aa13.25□□□□□ -0.29
COL2A1-208ENST00000493991 SPHKAPQ2M3C7 1700 aa13.25□□□□□ -0.29
COL2A1-208ENST00000493991 KIAA2012Q0VF49 1180 aa13.24□□□□□ -0.29
COL2A1-208ENST00000493991 MTMR7Q9Y216 660 aa13.24□□□□□ -0.29
COL2A1-208ENST00000493991 PPRC1Q5VV67 1664 aaKnown RBP13.24□□□□□ -0.29
COL2A1-208ENST00000493991 A2ML1A8K2U0 1454 aa13.24□□□□□ -0.29
COL2A1-208ENST00000493991 CDK11BP21127 795 aaKnown RBP13.24□□□□□ -0.29
COL2A1-208ENST00000493991 RAB11FIP4Q86YS3 637 aa13.24□□□□□ -0.29
COL2A1-208ENST00000493991 LRRC2Q9BYS8 371 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms