RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SBF1O95248 1867 aa14.32□□□□□ -0.12
PDLIM1-205ENST00000493949 C16orf71Q8IYS4 520 aaPredicted RBP14.32□□□□□ -0.12
PDLIM1-205ENST00000493949 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
PDLIM1-205ENST00000493949 ZCRB1Q8TBF4 217 aaKnown RBP14.32□□□□□ -0.12
PDLIM1-205ENST00000493949 IP6K1Q92551 441 aa14.32□□□□□ -0.12
PDLIM1-205ENST00000493949 HSPA1AP0DMV8 641 aaKnown RBP14.31□□□□□ -0.12
PDLIM1-205ENST00000493949 HSPA1BP0DMV9 641 aaKnown RBP14.31□□□□□ -0.12
PDLIM1-205ENST00000493949 AMIGO3Q86WK7 504 aa14.31□□□□□ -0.12
PDLIM1-205ENST00000493949 SIN3AQ96ST3 1273 aa14.31□□□□□ -0.12
PDLIM1-205ENST00000493949 MEGF6O75095 1541 aa14.31□□□□□ -0.12
PDLIM1-205ENST00000493949 SBNO2Q9Y2G9 1366 aa14.3□□□□□ -0.12
PDLIM1-205ENST00000493949 CD163L1Q9NR16 1453 aa14.3□□□□□ -0.12
PDLIM1-205ENST00000493949 SSFA2P28290 1259 aa14.29□□□□□ -0.12
PDLIM1-205ENST00000493949 TGFB2P61812 414 aa14.29□□□□□ -0.12
PDLIM1-205ENST00000493949 NME9Q86XW9 330 aa14.29□□□□□ -0.12
PDLIM1-205ENST00000493949 RBM19Q9Y4C8 960 aaKnown RBP14.29□□□□□ -0.12
PDLIM1-205ENST00000493949 PALLDQ8WX93 1383 aa14.29□□□□□ -0.12
PDLIM1-205ENST00000493949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
PDLIM1-205ENST00000493949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.28□□□□□ -0.12
PDLIM1-205ENST00000493949 AK7Q96M32 723 aa14.28□□□□□ -0.12
PDLIM1-205ENST00000493949 KCPQ6ZWJ8 1503 aa14.27□□□□□ -0.12
PDLIM1-205ENST00000493949 CGNL1Q0VF96 1302 aa14.27□□□□□ -0.12
PDLIM1-205ENST00000493949 KDM2BQ8NHM5 1336 aa14.27□□□□□ -0.12
PDLIM1-205ENST00000493949 ZBTB22O15209 634 aa14.27□□□□□ -0.13
PDLIM1-205ENST00000493949 BCS1LQ9Y276 419 aa14.27□□□□□ -0.13
PDLIM1-205ENST00000493949 C9orf131Q5VYM1 1079 aa14.26□□□□□ -0.13
PDLIM1-205ENST00000493949 ARHGAP27Q6ZUM4 889 aa14.26□□□□□ -0.13
PDLIM1-205ENST00000493949 SMC1BQ8NDV3 1235 aa14.26□□□□□ -0.13
PDLIM1-205ENST00000493949 EDC4Q6P2E9 1401 aaKnown RBP14.25□□□□□ -0.13
PDLIM1-205ENST00000493949 HAX1O00165 279 aa14.24□□□□□ -0.13
PDLIM1-205ENST00000493949 SMARCC1Q92922 1105 aaPredicted RBP14.24□□□□□ -0.13
PDLIM1-205ENST00000493949 A0A0G2JLW4 131 aa14.23□□□□□ -0.13
PDLIM1-205ENST00000493949 PHF14O94880 888 aa14.23□□□□□ -0.13
PDLIM1-205ENST00000493949 MMP10P09238 476 aa14.23□□□□□ -0.13
PDLIM1-205ENST00000493949 SMIM5Q71RC9 77 aa14.23□□□□□ -0.13
PDLIM1-205ENST00000493949 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
PDLIM1-205ENST00000493949 RRAGCQ9HB90 399 aa14.23□□□□□ -0.13
PDLIM1-205ENST00000493949 C4AP0C0L4 1744 aa14.23□□□□□ -0.13
PDLIM1-205ENST00000493949 HOXC9P31274 260 aa14.22□□□□□ -0.13
PDLIM1-205ENST00000493949 FCHSD2O94868 740 aa14.21□□□□□ -0.13
PDLIM1-205ENST00000493949 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
PDLIM1-205ENST00000493949 DPEP1P16444 411 aa14.2□□□□□ -0.14
PDLIM1-205ENST00000493949 KCNA3P22001 575 aa14.2□□□□□ -0.14
PDLIM1-205ENST00000493949 EIF4G2P78344 907 aaKnown RBP eCLIP14.2□□□□□ -0.14
PDLIM1-205ENST00000493949 MPRIPQ6WCQ1 1025 aa14.2□□□□□ -0.14
PDLIM1-205ENST00000493949 PPP4R2Q9NY27 417 aa14.2□□□□□ -0.14
PDLIM1-205ENST00000493949 MAP3K19Q56UN5 1328 aa14.19□□□□□ -0.14
PDLIM1-205ENST00000493949 ZBED9Q6R2W3 1325 aa14.19□□□□□ -0.14
PDLIM1-205ENST00000493949 PCDH11XQ9BZA7 1347 aa14.19□□□□□ -0.14
PDLIM1-205ENST00000493949 PCDH11YQ9BZA8 1340 aa14.19□□□□□ -0.14
PDLIM1-205ENST00000493949 ZC3H4Q9UPT8 1303 aaKnown RBP14.19□□□□□ -0.14
PDLIM1-205ENST00000493949 LINC00116Q8NCU8 138 aa14.19□□□□□ -0.14
PDLIM1-205ENST00000493949 L3MBTL2Q969R5 705 aa14.19□□□□□ -0.14
PDLIM1-205ENST00000493949 DCAF5Q96JK2 942 aa14.19□□□□□ -0.14
PDLIM1-205ENST00000493949 ZNF831Q5JPB2 1677 aa14.18□□□□□ -0.14
PDLIM1-205ENST00000493949 FBLN1P23142 703 aa14.18□□□□□ -0.14
PDLIM1-205ENST00000493949 NBPF6Q5VWK0 638 aa14.18□□□□□ -0.14
PDLIM1-205ENST00000493949 HDGFL2Q7Z4V5 671 aaPredicted RBP14.18□□□□□ -0.14
PDLIM1-205ENST00000493949 NLGN1Q8N2Q7 840 aa14.18□□□□□ -0.14
PDLIM1-205ENST00000493949 NBPF4Q96M43 638 aa14.18□□□□□ -0.14
PDLIM1-205ENST00000493949 PRDM10Q9NQV6 1147 aa14.18□□□□□ -0.14
PDLIM1-205ENST00000493949 RTL1A6NKG5 1358 aa14.18□□□□□ -0.14
PDLIM1-205ENST00000493949 CCDC88AQ3V6T2 1871 aa14.17□□□□□ -0.14
PDLIM1-205ENST00000493949 LOC102724428A0A0B4J2F2 783 aa14.17□□□□□ -0.14
PDLIM1-205ENST00000493949 SIK1P57059 783 aa14.17□□□□□ -0.14
PDLIM1-205ENST00000493949 RAPGEF4Q8WZA2 1011 aa14.17□□□□□ -0.14
PDLIM1-205ENST00000493949 CCDC87Q9NVE4 849 aa14.17□□□□□ -0.14
PDLIM1-205ENST00000493949 RNF181Q9P0P0 153 aa14.17□□□□□ -0.14
PDLIM1-205ENST00000493949 KDM6AO15550 1401 aaPredicted RBP14.16□□□□□ -0.14
PDLIM1-205ENST00000493949 GNPATO15228 680 aa14.16□□□□□ -0.14
PDLIM1-205ENST00000493949 CYP27B1O15528 508 aa14.16□□□□□ -0.14
PDLIM1-205ENST00000493949 TATP17735 454 aaPredicted RBP14.16□□□□□ -0.14
PDLIM1-205ENST00000493949 FXR2P51116 673 aaKnown RBP eCLIP14.16□□□□□ -0.14
PDLIM1-205ENST00000493949 PIGBQ92521 554 aa14.16□□□□□ -0.14
PDLIM1-205ENST00000493949 A0A1W2PP64 1363 aa14.16□□□□□ -0.14
PDLIM1-205ENST00000493949 AMPHP49418 695 aa14.15□□□□□ -0.14
PDLIM1-205ENST00000493949 TMF1P82094 1093 aa14.15□□□□□ -0.14
PDLIM1-205ENST00000493949 PIM2Q9P1W9 311 aa14.15□□□□□ -0.14
PDLIM1-205ENST00000493949 COL5A3P25940 1745 aaPredicted RBP14.15□□□□□ -0.14
PDLIM1-205ENST00000493949 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
PDLIM1-205ENST00000493949 VEGFAP15692 232 aaPredicted RBP14.14□□□□□ -0.15
PDLIM1-205ENST00000493949 HNRNPUQ00839 825 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDLIM1-205ENST00000493949 ITPK1Q13572 414 aa14.14□□□□□ -0.15
PDLIM1-205ENST00000493949 NKX1-1Q15270 411 aaPredicted RBP14.14□□□□□ -0.15
PDLIM1-205ENST00000493949 SLC12A5Q9H2X9 1139 aa14.14□□□□□ -0.15
PDLIM1-205ENST00000493949 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
PDLIM1-205ENST00000493949 FOXN1O15353 648 aa14.13□□□□□ -0.15
PDLIM1-205ENST00000493949 TMC1Q8TDI8 760 aa14.13□□□□□ -0.15
PDLIM1-205ENST00000493949 TERF2IPQ9NYB0 399 aa14.13□□□□□ -0.15
PDLIM1-205ENST00000493949 VIRMAQ69YN4 1812 aaKnown RBP14.13□□□□□ -0.15
PDLIM1-205ENST00000493949 MYH14Q7Z406 1995 aaKnown RBP14.13□□□□□ -0.15
PDLIM1-205ENST00000493949 TIAM2Q8IVF5 1701 aa14.12□□□□□ -0.15
PDLIM1-205ENST00000493949 GLTPD2A6NH11 291 aa14.12□□□□□ -0.15
PDLIM1-205ENST00000493949 DALRD3Q5D0E6 543 aaKnown RBP14.12□□□□□ -0.15
PDLIM1-205ENST00000493949 TRAPPC3LQ5T215 181 aa14.12□□□□□ -0.15
PDLIM1-205ENST00000493949 USHBP1Q8N6Y0 703 aa14.12□□□□□ -0.15
PDLIM1-205ENST00000493949 BCL11AQ9H165 835 aa14.12□□□□□ -0.15
PDLIM1-205ENST00000493949 HSPA5P11021 654 aaKnown RBP14.11□□□□□ -0.15
PDLIM1-205ENST00000493949 GYS1P13807 737 aa14.11□□□□□ -0.15
PDLIM1-205ENST00000493949 ERICH6Q7L0X2 663 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms