RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 BRMS1Q9HCU9 246 aa8.29□□□□□ -1.08
VPS13B-205ENST00000493587 JRKLQ9Y4A0 524 aa8.29□□□□□ -1.08
VPS13B-205ENST00000493587 GUCY2CP25092 1073 aa8.28□□□□□ -1.08
VPS13B-205ENST00000493587 SSFA2P28290 1259 aa8.28□□□□□ -1.08
VPS13B-205ENST00000493587 CCDC91Q7Z6B0 441 aa8.28□□□□□ -1.08
VPS13B-205ENST00000493587 PIBF1Q8WXW3 757 aa8.28□□□□□ -1.08
VPS13B-205ENST00000493587 PDLIM2Q96JY6 352 aa8.28□□□□□ -1.08
VPS13B-205ENST00000493587 SUFUQ9UMX1 484 aa8.28□□□□□ -1.08
VPS13B-205ENST00000493587 PIK3C2AO00443 1686 aa8.28□□□□□ -1.08
VPS13B-205ENST00000493587 SYCE3A1L190 88 aa8.28□□□□□ -1.08
VPS13B-205ENST00000493587 TRIM66O15016 1216 aa8.28□□□□□ -1.08
VPS13B-205ENST00000493587 NOP2P46087 812 aaKnown RBP8.28□□□□□ -1.08
VPS13B-205ENST00000493587 CARD14Q9BXL6 1004 aa8.28□□□□□ -1.08
VPS13B-205ENST00000493587 CWC15Q9P013 229 aaKnown RBP8.28□□□□□ -1.08
VPS13B-205ENST00000493587 YTHDC2Q9H6S0 1430 aaKnown RBP8.27□□□□□ -1.09
VPS13B-205ENST00000493587 MNS1Q8NEH6 495 aa8.27□□□□□ -1.09
VPS13B-205ENST00000493587 CXorf56Q9H5V9 222 aa8.27□□□□□ -1.09
VPS13B-205ENST00000493587 RBM27Q9P2N5 1060 aaKnown RBP8.27□□□□□ -1.09
VPS13B-205ENST00000493587 DDX41Q9UJV9 622 aaKnown RBP8.27□□□□□ -1.09
VPS13B-205ENST00000493587 TTC31Q49AM3 519 aaPredicted RBP8.27□□□□□ -1.09
VPS13B-205ENST00000493587 CCDC191Q8NCU4 936 aa8.27□□□□□ -1.09
VPS13B-205ENST00000493587 CTNNA3Q9UI47 895 aa8.27□□□□□ -1.09
VPS13B-205ENST00000493587 POLR3AO14802 1390 aaPredicted RBP8.26□□□□□ -1.09
VPS13B-205ENST00000493587 NPHP1O15259 732 aa8.26□□□□□ -1.09
VPS13B-205ENST00000493587 SYT10Q6XYQ8 523 aa8.26□□□□□ -1.09
VPS13B-205ENST00000493587 KRBA2Q6ZNG9 492 aa8.26□□□□□ -1.09
VPS13B-205ENST00000493587 NEK11Q8NG66 645 aa8.26□□□□□ -1.09
VPS13B-205ENST00000493587 CIZ1Q9ULV3 898 aaPredicted RBP8.26□□□□□ -1.09
VPS13B-205ENST00000493587 PLEKHH1Q9ULM0 1364 aa8.26□□□□□ -1.09
VPS13B-205ENST00000493587 MYO1CO00159 1063 aa8.26□□□□□ -1.09
VPS13B-205ENST00000493587 PIK3R5Q8WYR1 880 aa8.26□□□□□ -1.09
VPS13B-205ENST00000493587 CPSF1Q10570 1443 aaKnown RBP8.26□□□□□ -1.09
VPS13B-205ENST00000493587 ADAMTS7Q9UKP4 1686 aa8.26□□□□□ -1.09
VPS13B-205ENST00000493587 ZNF513Q8N8E2 541 aaPredicted RBP8.26□□□□□ -1.09
VPS13B-205ENST00000493587 ANKRD7Q92527 254 aa8.26□□□□□ -1.09
VPS13B-205ENST00000493587 DONSONQ9NYP3 566 aa8.26□□□□□ -1.09
VPS13B-205ENST00000493587 POLR3GO15318 223 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-205ENST00000493587 PRPF40AO75400 957 aaKnown RBP8.25□□□□□ -1.09
VPS13B-205ENST00000493587 ZNF445P59923 1031 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 GPS2Q13227 327 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 RAB3GAP1Q15042 981 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 RPAINQ86UA6 219 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 SGSM3Q96HU1 749 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 RBM28Q9NW13 759 aaKnown RBP8.25□□□□□ -1.09
VPS13B-205ENST00000493587 PNPLA6Q8IY17 1366 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 ATP7BP35670 1465 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 SIPA1L3O60292 1781 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-205ENST00000493587 NWD1Q149M9 1564 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 A0A1B0GUL7 405 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 H0YHG0 523 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 SARNPP82979 210 aaKnown RBP8.25□□□□□ -1.09
VPS13B-205ENST00000493587 TTLL5Q6EMB2 1281 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 RTF1Q92541 710 aaKnown RBP8.25□□□□□ -1.09
VPS13B-205ENST00000493587 ST7Q9NRC1 585 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 MRVI1Q9Y6F6 885 aa8.25□□□□□ -1.09
VPS13B-205ENST00000493587 XIRP1Q702N8 1843 aaKnown RBP8.25□□□□□ -1.09
VPS13B-205ENST00000493587 WDR43Q15061 677 aaKnown RBP eCLIP8.24□□□□□ -1.09
VPS13B-205ENST00000493587 GGT6Q6P531 493 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 ANKRD20A12PQ8NF67 263 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 PPP6R1Q9UPN7 881 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 ADAMTS13Q76LX8 1427 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 TRPM3Q9HCF6 1732 aaPredicted RBP8.24□□□□□ -1.09
VPS13B-205ENST00000493587 BAG4O95429 457 aaKnown RBP8.24□□□□□ -1.09
VPS13B-205ENST00000493587 IGHDP01880 384 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 MAP2K2P36507 400 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 ATP6V1AP38606 617 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 NCBP1Q09161 790 aaKnown RBP8.24□□□□□ -1.09
VPS13B-205ENST00000493587 CCDC112Q8NEF3 446 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 EIF3AQ14152 1382 aaKnown RBP8.24□□□□□ -1.09
VPS13B-205ENST00000493587 ABCC11Q96J66 1382 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 KIF18AQ8NI77 898 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 GTF3C6Q969F1 213 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 SSH2Q76I76 1423 aa8.24□□□□□ -1.09
VPS13B-205ENST00000493587 HMGB1P09429 215 aaKnown RBP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 ANAPC15P60006 121 aa8.23□□□□□ -1.09
VPS13B-205ENST00000493587 FKBP5Q13451 457 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 V9GYY5 206 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 USP25Q9UHP3 1055 aa8.23□□□□□ -1.09
VPS13B-205ENST00000493587 LRRFIP2Q9Y608 721 aaKnown RBP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 MORC2Q9Y6X9 1032 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 STRCP1A6NGW2 1772 aa8.23□□□□□ -1.09
VPS13B-205ENST00000493587 LMO7Q8WWI1 1683 aa8.23□□□□□ -1.09
VPS13B-205ENST00000493587 HTATSF1O43719 755 aaKnown RBP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 KIF1CO43896 1103 aaKnown RBP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 NAA30Q147X3 362 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 FOXD4L5Q5VV16 416 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 TXLNBQ8N3L3 684 aa8.23□□□□□ -1.09
VPS13B-205ENST00000493587 FOXD4L4Q8WXT5 416 aaPredicted RBP8.23□□□□□ -1.09
VPS13B-205ENST00000493587 RAI14Q9P0K7 980 aa8.23□□□□□ -1.09
VPS13B-205ENST00000493587 FAM135BQ49AJ0 1406 aa8.22□□□□□ -1.09
VPS13B-205ENST00000493587 KIF16BQ96L93 1317 aa8.22□□□□□ -1.09
VPS13B-205ENST00000493587 U2SURPO15042 1029 aaKnown RBP8.22□□□□□ -1.09
VPS13B-205ENST00000493587 TERF2IPQ9NYB0 399 aa8.22□□□□□ -1.09
VPS13B-205ENST00000493587 CFAP70Q5T0N1 1121 aa8.22□□□□□ -1.09
VPS13B-205ENST00000493587 CREBRFQ8IUR6 639 aa8.22□□□□□ -1.09
VPS13B-205ENST00000493587 TSPY26PQ9H489 355 aa8.22□□□□□ -1.09
VPS13B-205ENST00000493587 ANKRD36BQ8N2N9 1353 aa8.22□□□□□ -1.09
VPS13B-205ENST00000493587 CYP2C19P33261 490 aa8.22□□□□□ -1.09
VPS13B-205ENST00000493587 IDI1Q13907 227 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms