RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 PCDHGA11Q9Y5H2 935 aa8.62□□□□□ -1.03
CCNB3-208ENST00000493507 ST8SIA5O15466 376 aa8.61□□□□□ -1.03
CCNB3-208ENST00000493507 RELBQ01201 579 aa8.61□□□□□ -1.03
CCNB3-208ENST00000493507 ESCO1Q5FWF5 840 aa8.61□□□□□ -1.03
CCNB3-208ENST00000493507 DNAAF2Q9NVR5 837 aaKnown RBP8.61□□□□□ -1.03
CCNB3-208ENST00000493507 AQRO60306 1485 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCNB3-208ENST00000493507 ARHGEF11O15085 1522 aa8.6□□□□□ -1.03
CCNB3-208ENST00000493507 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.6□□□□□ -1.03
CCNB3-208ENST00000493507 BMP2P12643 396 aa8.6□□□□□ -1.03
CCNB3-208ENST00000493507 SRPK2P78362 688 aaKnown RBP8.6□□□□□ -1.03
CCNB3-208ENST00000493507 KDF1Q8NAX2 398 aaPredicted RBP8.6□□□□□ -1.03
CCNB3-208ENST00000493507 RBM19Q9Y4C8 960 aaKnown RBP8.6□□□□□ -1.03
CCNB3-208ENST00000493507 A0A1W2PRU2 124 aa8.59□□□□□ -1.03
CCNB3-208ENST00000493507 FAM196BA6NMK8 535 aa8.59□□□□□ -1.03
CCNB3-208ENST00000493507 SPINT1O43278 529 aa8.59□□□□□ -1.03
CCNB3-208ENST00000493507 CLDN10P78369 228 aa8.59□□□□□ -1.03
CCNB3-208ENST00000493507 ATP13A2Q9NQ11 1180 aa8.59□□□□□ -1.03
CCNB3-208ENST00000493507 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
CCNB3-208ENST00000493507 BMP1P13497 986 aa8.58□□□□□ -1.04
CCNB3-208ENST00000493507 CLN3Q13286 438 aa8.58□□□□□ -1.04
CCNB3-208ENST00000493507 CDCA8Q53HL2 280 aa8.58□□□□□ -1.04
CCNB3-208ENST00000493507 C6orf118Q5T5N4 469 aa8.58□□□□□ -1.04
CCNB3-208ENST00000493507 CCDC102BQ68D86 513 aa8.58□□□□□ -1.04
CCNB3-208ENST00000493507 TRIM46Q7Z4K8 759 aa8.58□□□□□ -1.04
CCNB3-208ENST00000493507 NLRP3Q96P20 1036 aa8.58□□□□□ -1.04
CCNB3-208ENST00000493507 ZNF395Q9H8N7 513 aaPredicted RBP8.58□□□□□ -1.04
CCNB3-208ENST00000493507 ARHGEF10LQ9HCE6 1279 aa8.58□□□□□ -1.04
CCNB3-208ENST00000493507 WASLO00401 505 aaPredicted RBP8.57□□□□□ -1.04
CCNB3-208ENST00000493507 ZBTB7BO15156 539 aaPredicted RBP8.57□□□□□ -1.04
CCNB3-208ENST00000493507 ATG7O95352 703 aa8.57□□□□□ -1.04
CCNB3-208ENST00000493507 GDF10P55107 478 aa8.57□□□□□ -1.04
CCNB3-208ENST00000493507 PTK7Q13308 1070 aa8.57□□□□□ -1.04
CCNB3-208ENST00000493507 SIX5Q8N196 739 aa8.57□□□□□ -1.04
CCNB3-208ENST00000493507 TPCN2Q8NHX9 752 aa8.57□□□□□ -1.04
CCNB3-208ENST00000493507 PURBQ96QR8 312 aaKnown RBP8.57□□□□□ -1.04
CCNB3-208ENST00000493507 SENP2Q9HC62 589 aa8.57□□□□□ -1.04
CCNB3-208ENST00000493507 ABCA10Q8WWZ4 1543 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L15C9J2P7 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L10C9JJH3 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L13C9JLJ4 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L12C9JPN9 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L11C9JVI0 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L21D6R901 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L18D6R9N7 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L22D6RA61 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L17D6RBQ6 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L19D6RCP7 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L20D6RJB6 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 MEN1O00255 615 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 BACH1O14867 736 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 INHAP05111 366 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 SCNN1DP51172 638 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 USP17L24Q0WX57 530 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 CRTC2Q53ET0 693 aaPredicted RBP8.56□□□□□ -1.04
CCNB3-208ENST00000493507 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 XAGE2Q96GT9 111 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 ZNF594Q96JF6 807 aaPredicted RBP8.56□□□□□ -1.04
CCNB3-208ENST00000493507 ZFP42Q96MM3 310 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 ESYT1Q9BSJ8 1104 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 ETNK1Q9HBU6 452 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 SNAPC4Q5SXM2 1469 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 ADAMTS12P58397 1594 aa8.56□□□□□ -1.04
CCNB3-208ENST00000493507 ELOAQ14241 798 aaKnown RBP8.55□□□□□ -1.04
CCNB3-208ENST00000493507 ANKMY2Q8IV38 441 aa8.55□□□□□ -1.04
CCNB3-208ENST00000493507 KIFC2Q96AC6 838 aa8.55□□□□□ -1.04
CCNB3-208ENST00000493507 INSM2Q96T92 566 aaPredicted RBP8.55□□□□□ -1.04
CCNB3-208ENST00000493507 RAB6BQ9NRW1 208 aa8.55□□□□□ -1.04
CCNB3-208ENST00000493507 DACH1Q9UI36 760 aa8.55□□□□□ -1.04
CCNB3-208ENST00000493507 KIAA1024Q9UPX6 916 aa8.55□□□□□ -1.04
CCNB3-208ENST00000493507 SOGA1O94964 1423 aa8.54□□□□□ -1.04
CCNB3-208ENST00000493507 WRNQ14191 1432 aaPredicted RBP eCLIP8.54□□□□□ -1.04
CCNB3-208ENST00000493507 CLASP1Q7Z460 1538 aa8.54□□□□□ -1.04
CCNB3-208ENST00000493507 TDRD9Q8NDG6 1382 aaKnown RBP8.54□□□□□ -1.04
CCNB3-208ENST00000493507 IL2RAP01589 272 aa8.54□□□□□ -1.04
CCNB3-208ENST00000493507 GPC1P35052 558 aa8.54□□□□□ -1.04
CCNB3-208ENST00000493507 SEC13P55735 322 aa8.54□□□□□ -1.04
CCNB3-208ENST00000493507 POLMQ9NP87 494 aaPredicted RBP8.54□□□□□ -1.04
CCNB3-208ENST00000493507 ARAP1Q96P48 1450 aa8.53□□□□□ -1.04
CCNB3-208ENST00000493507 TMEM229AB2RXF0 380 aa8.53□□□□□ -1.04
CCNB3-208ENST00000493507 M0R2N6 131 aa8.53□□□□□ -1.04
CCNB3-208ENST00000493507 RNF144AP50876 292 aaPredicted RBP8.53□□□□□ -1.04
CCNB3-208ENST00000493507 DPYDQ12882 1025 aa8.53□□□□□ -1.04
CCNB3-208ENST00000493507 FAM200AQ8TCP9 573 aa8.53□□□□□ -1.04
CCNB3-208ENST00000493507 SLC4A9Q96Q91 983 aa8.53□□□□□ -1.04
CCNB3-208ENST00000493507 NOVA2Q9UNW9 492 aaKnown RBP8.53□□□□□ -1.04
CCNB3-208ENST00000493507 TTLL8A6PVC2 850 aa8.52□□□□□ -1.05
CCNB3-208ENST00000493507 LCE2BO14633 110 aa8.52□□□□□ -1.05
CCNB3-208ENST00000493507 DKK1O94907 266 aa8.52□□□□□ -1.05
CCNB3-208ENST00000493507 STAU1O95793 577 aaKnown RBP8.52□□□□□ -1.05
CCNB3-208ENST00000493507 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.05
CCNB3-208ENST00000493507 CENPCQ03188 943 aa8.52□□□□□ -1.05
CCNB3-208ENST00000493507 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
CCNB3-208ENST00000493507 ZNF358Q9NW07 568 aa8.52□□□□□ -1.05
CCNB3-208ENST00000493507 HRH3Q9Y5N1 445 aa8.52□□□□□ -1.05
CCNB3-208ENST00000493507 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
CCNB3-208ENST00000493507 GTF2E1P29083 439 aaPredicted RBP8.51□□□□□ -1.05
CCNB3-208ENST00000493507 SMTNP53814 917 aa8.51□□□□□ -1.05
CCNB3-208ENST00000493507 SLC27A3Q5K4L6 730 aa8.51□□□□□ -1.05
CCNB3-208ENST00000493507 TRIM47Q96LD4 638 aa8.51□□□□□ -1.05
CCNB3-208ENST00000493507 ARXQ96QS3 562 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms