RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 RNF20Q5VTR2 975 aa8.12□□□□□ -1.11
EWSR1-220ENST00000493426 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.12□□□□□ -1.11
EWSR1-220ENST00000493426 KIF18AQ8NI77 898 aa8.12□□□□□ -1.11
EWSR1-220ENST00000493426 TIGD1Q96MW7 591 aa8.12□□□□□ -1.11
EWSR1-220ENST00000493426 IFT57Q9NWB7 429 aa8.12□□□□□ -1.11
EWSR1-220ENST00000493426 MLH3Q9UHC1 1453 aa8.12□□□□□ -1.11
EWSR1-220ENST00000493426 FAM135BQ49AJ0 1406 aa8.12□□□□□ -1.11
EWSR1-220ENST00000493426 ADGRB1O14514 1584 aa8.11□□□□□ -1.11
EWSR1-220ENST00000493426 HAP1P54257 671 aaPredicted RBP8.11□□□□□ -1.11
EWSR1-220ENST00000493426 GNAI1P63096 354 aa8.11□□□□□ -1.11
EWSR1-220ENST00000493426 TAF7LQ5H9L4 462 aa8.11□□□□□ -1.11
EWSR1-220ENST00000493426 ZNF771Q7L3S4 317 aaPredicted RBP8.11□□□□□ -1.11
EWSR1-220ENST00000493426 USP48Q86UV5 1035 aa8.11□□□□□ -1.11
EWSR1-220ENST00000493426 KRT222Q8N1A0 295 aa8.11□□□□□ -1.11
EWSR1-220ENST00000493426 TSC1Q92574 1164 aa8.11□□□□□ -1.11
EWSR1-220ENST00000493426 KCNF1Q9H3M0 494 aa8.11□□□□□ -1.11
EWSR1-220ENST00000493426 IFT172Q9UG01 1749 aa8.11□□□□□ -1.11
EWSR1-220ENST00000493426 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
EWSR1-220ENST00000493426 RGS12O14924 1447 aa8.11□□□□□ -1.11
EWSR1-220ENST00000493426 CPSF1Q10570 1443 aaKnown RBP8.11□□□□□ -1.11
EWSR1-220ENST00000493426 NEMFO60524 1076 aa8.1□□□□□ -1.11
EWSR1-220ENST00000493426 CAVIN2O95810 425 aa8.1□□□□□ -1.11
EWSR1-220ENST00000493426 MCCP23508 829 aa8.1□□□□□ -1.11
EWSR1-220ENST00000493426 PLCD3Q8N3E9 789 aa8.1□□□□□ -1.11
EWSR1-220ENST00000493426 AFAP1Q8N556 730 aa8.1□□□□□ -1.11
EWSR1-220ENST00000493426 ZNF397Q8NF99 534 aaPredicted RBP8.1□□□□□ -1.11
EWSR1-220ENST00000493426 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.1□□□□□ -1.11
EWSR1-220ENST00000493426 ATP6V1DQ9Y5K8 247 aa8.1□□□□□ -1.11
EWSR1-220ENST00000493426 ZFYVE9O95405 1425 aa8.1□□□□□ -1.11
EWSR1-220ENST00000493426 EVC2Q86UK5 1308 aa8.09□□□□□ -1.11
EWSR1-220ENST00000493426 TUBB4AP04350 444 aa8.09□□□□□ -1.11
EWSR1-220ENST00000493426 CDC25BP30305 580 aa8.09□□□□□ -1.11
EWSR1-220ENST00000493426 NEK4P51957 841 aa8.09□□□□□ -1.11
EWSR1-220ENST00000493426 IRX5P78411 483 aaPredicted RBP8.09□□□□□ -1.11
EWSR1-220ENST00000493426 PIP4P2Q8N4L2 257 aa8.09□□□□□ -1.11
EWSR1-220ENST00000493426 JARID2Q92833 1246 aaPredicted RBP8.09□□□□□ -1.11
EWSR1-220ENST00000493426 KIF1BPQ96EK5 621 aa8.09□□□□□ -1.11
EWSR1-220ENST00000493426 PYCARDQ9ULZ3 195 aa8.09□□□□□ -1.11
EWSR1-220ENST00000493426 ATP10DQ9P241 1426 aa8.09□□□□□ -1.11
EWSR1-220ENST00000493426 KIF2AO00139 706 aaPredicted RBP8.08□□□□□ -1.12
EWSR1-220ENST00000493426 DIAPH1O60610 1272 aaKnown RBP8.08□□□□□ -1.12
EWSR1-220ENST00000493426 GADD45BO75293 160 aaPredicted RBP8.08□□□□□ -1.12
EWSR1-220ENST00000493426 PRKAR2AP13861 404 aaKnown RBP8.08□□□□□ -1.12
EWSR1-220ENST00000493426 RBM6P78332 1123 aaKnown RBP8.08□□□□□ -1.12
EWSR1-220ENST00000493426 NFE2L2Q16236 605 aa8.08□□□□□ -1.12
EWSR1-220ENST00000493426 FAM200AQ8TCP9 573 aa8.08□□□□□ -1.12
EWSR1-220ENST00000493426 ZNF830Q96NB3 372 aaPredicted RBP8.08□□□□□ -1.12
EWSR1-220ENST00000493426 ESYT1Q9BSJ8 1104 aa8.08□□□□□ -1.12
EWSR1-220ENST00000493426 BCL11BQ9C0K0 894 aaPredicted RBP8.08□□□□□ -1.12
EWSR1-220ENST00000493426 EFCC1Q9HA90 598 aa8.08□□□□□ -1.12
EWSR1-220ENST00000493426 STAP2Q9UGK3 403 aa8.08□□□□□ -1.12
EWSR1-220ENST00000493426 KIAA0232Q92628 1395 aa8.08□□□□□ -1.12
EWSR1-220ENST00000493426 EFCAB6Q5THR3 1501 aa8.08□□□□□ -1.12
EWSR1-220ENST00000493426 AOX1Q06278 1338 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 CCDC171Q6TFL3 1326 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 RAD50Q92878 1312 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 SALL3Q9BXA9 1300 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 KIF3BO15066 747 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 ATP8B1O43520 1251 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 CCDC192P0DO97 292 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 ZSCAN22P10073 491 aaPredicted RBP8.07□□□□□ -1.12
EWSR1-220ENST00000493426 HCLS1P14317 486 aaPredicted RBP8.07□□□□□ -1.12
EWSR1-220ENST00000493426 LMOD3Q0VAK6 560 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 CEP85Q6P2H3 762 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 RBM43Q6ZSC3 357 aaKnown RBP8.07□□□□□ -1.12
EWSR1-220ENST00000493426 ERO1AQ96HE7 468 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 ADGRB3O60242 1522 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 KIDINS220Q9ULH0 1771 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 MROH1Q8NDA8 1641 aa8.07□□□□□ -1.12
EWSR1-220ENST00000493426 RICTORQ6R327 1708 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 ELP1O95163 1332 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 POGZQ7Z3K3 1410 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 AP5Z1O43299 807 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 HMMRO75330 724 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 CYP2C19P33261 490 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 KCNJ4P48050 445 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 VASPP50552 380 aaPredicted RBP8.06□□□□□ -1.12
EWSR1-220ENST00000493426 PDE1AP54750 535 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 MUM1L1Q5H9M0 696 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 C16orf71Q8IYS4 520 aaPredicted RBP8.06□□□□□ -1.12
EWSR1-220ENST00000493426 C17orf53Q8N3J3 647 aaPredicted RBP8.06□□□□□ -1.12
EWSR1-220ENST00000493426 CCDC112Q8NEF3 446 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 TDRD7Q8NHU6 1098 aaKnown RBP8.06□□□□□ -1.12
EWSR1-220ENST00000493426 SRCIN1Q9C0H9 1055 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 YY1AP1Q9H869 796 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 KIF1BO60333 1816 aa8.06□□□□□ -1.12
EWSR1-220ENST00000493426 FRMPD1Q5SYB0 1578 aa8.05□□□□□ -1.12
EWSR1-220ENST00000493426 PTPRCP08575 1304 aa8.05□□□□□ -1.12
EWSR1-220ENST00000493426 U2SURPO15042 1029 aaKnown RBP8.05□□□□□ -1.12
EWSR1-220ENST00000493426 TNNT1P13805 278 aa8.05□□□□□ -1.12
EWSR1-220ENST00000493426 CDK11BP21127 795 aaKnown RBP8.05□□□□□ -1.12
EWSR1-220ENST00000493426 HSPA4P34932 840 aa8.05□□□□□ -1.12
EWSR1-220ENST00000493426 DHX8Q14562 1220 aaKnown RBP8.05□□□□□ -1.12
EWSR1-220ENST00000493426 BMS1Q14692 1282 aaKnown RBP8.05□□□□□ -1.12
EWSR1-220ENST00000493426 SARM1Q6SZW1 724 aa8.05□□□□□ -1.12
EWSR1-220ENST00000493426 PLA2G4DQ86XP0 818 aa8.05□□□□□ -1.12
EWSR1-220ENST00000493426 ARID3AQ99856 593 aa8.05□□□□□ -1.12
EWSR1-220ENST00000493426 FYB1O15117 783 aa8.04□□□□□ -1.12
EWSR1-220ENST00000493426 SMARCA5O60264 1052 aaPredicted RBP8.04□□□□□ -1.12
EWSR1-220ENST00000493426 F13A1P00488 732 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms