RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 MCM10Q7L590 875 aa19.1■□□□□ 0.65
BRAT1-206ENST00000493232 ZPR1O75312 459 aa19.1■□□□□ 0.65
BRAT1-206ENST00000493232 SEC63Q9UGP8 760 aaKnown RBP19.1■□□□□ 0.65
BRAT1-206ENST00000493232 SKIDA1Q1XH10 827 aa19.1■□□□□ 0.65
BRAT1-206ENST00000493232 PIP4K2BP78356 416 aa19.09■□□□□ 0.65
BRAT1-206ENST00000493232 CDK13Q14004 1512 aaKnown RBP19.09■□□□□ 0.65
BRAT1-206ENST00000493232 CCDC85AQ96PX6 553 aaPredicted RBP19.09■□□□□ 0.65
BRAT1-206ENST00000493232 TNIP1Q15025 636 aa19.09■□□□□ 0.65
BRAT1-206ENST00000493232 SEPT7Q16181 437 aaKnown RBP19.09■□□□□ 0.65
BRAT1-206ENST00000493232 CD109Q6YHK3 1445 aa19.09■□□□□ 0.65
BRAT1-206ENST00000493232 HMGB1P09429 215 aaKnown RBP19.09■□□□□ 0.65
BRAT1-206ENST00000493232 EIF3JO75822 258 aaKnown RBP19.08■□□□□ 0.65
BRAT1-206ENST00000493232 USP5P45974 858 aa19.08■□□□□ 0.65
BRAT1-206ENST00000493232 MAP3K11Q16584 847 aa19.08■□□□□ 0.65
BRAT1-206ENST00000493232 TSPYL1Q9H0U9 437 aa19.08■□□□□ 0.65
BRAT1-206ENST00000493232 PPP1R12BO60237 982 aaPredicted RBP19.08■□□□□ 0.65
BRAT1-206ENST00000493232 MYD88Q99836 296 aa19.08■□□□□ 0.64
BRAT1-206ENST00000493232 SH2B1Q9NRF2 756 aaPredicted RBP19.08■□□□□ 0.64
BRAT1-206ENST00000493232 MCM4P33991 863 aa19.08■□□□□ 0.64
BRAT1-206ENST00000493232 PHAXQ9H814 394 aaKnown RBP19.08■□□□□ 0.64
BRAT1-206ENST00000493232 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.64
BRAT1-206ENST00000493232 ARHGEF11O15085 1522 aa19.07■□□□□ 0.64
BRAT1-206ENST00000493232 EIF5P55010 431 aaKnown RBP19.07■□□□□ 0.64
BRAT1-206ENST00000493232 MAP3K12Q12852 859 aa19.07■□□□□ 0.64
BRAT1-206ENST00000493232 IQGAP2Q13576 1575 aa19.07■□□□□ 0.64
BRAT1-206ENST00000493232 PTCD1O75127 700 aaKnown RBP19.07■□□□□ 0.64
BRAT1-206ENST00000493232 PHF8Q9UPP1 1060 aa19.07■□□□□ 0.64
BRAT1-206ENST00000493232 POLR3DP05423 398 aaPredicted RBP19.07■□□□□ 0.64
BRAT1-206ENST00000493232 IFIT5Q13325 482 aaKnown RBP19.07■□□□□ 0.64
BRAT1-206ENST00000493232 WAPLQ7Z5K2 1190 aa19.07■□□□□ 0.64
BRAT1-206ENST00000493232 NAPBQ9H115 298 aa19.07■□□□□ 0.64
BRAT1-206ENST00000493232 HYPKQ9NX55 129 aa19.07■□□□□ 0.64
BRAT1-206ENST00000493232 PLEKHH1Q9ULM0 1364 aa19.07■□□□□ 0.64
BRAT1-206ENST00000493232 ABCA10Q8WWZ4 1543 aa19.06■□□□□ 0.64
BRAT1-206ENST00000493232 SEPT11Q9NVA2 429 aaKnown RBP19.06■□□□□ 0.64
BRAT1-206ENST00000493232 MIS18AQ9NYP9 233 aa19.06■□□□□ 0.64
BRAT1-206ENST00000493232 TRIM21P19474 475 aaKnown RBP19.06■□□□□ 0.64
BRAT1-206ENST00000493232 CAMSAP2Q08AD1 1489 aa19.06■□□□□ 0.64
BRAT1-206ENST00000493232 EPB41L2O43491 1005 aaKnown RBP19.06■□□□□ 0.64
BRAT1-206ENST00000493232 SLC5A1P13866 664 aa19.06■□□□□ 0.64
BRAT1-206ENST00000493232 CRACR2BQ8N4Y2 399 aaPredicted RBP19.06■□□□□ 0.64
BRAT1-206ENST00000493232 DDX11Q96FC9 970 aa19.06■□□□□ 0.64
BRAT1-206ENST00000493232 MKNK2Q9HBH9 465 aa19.06■□□□□ 0.64
BRAT1-206ENST00000493232 PRPF40BQ6NWY9 871 aaKnown RBP19.05■□□□□ 0.64
BRAT1-206ENST00000493232 ZNF397Q8NF99 534 aaPredicted RBP19.05■□□□□ 0.64
BRAT1-206ENST00000493232 POTEJP0CG39 1038 aa19.05■□□□□ 0.64
BRAT1-206ENST00000493232 RARSP54136 660 aaKnown RBP19.05■□□□□ 0.64
BRAT1-206ENST00000493232 DNAAF4Q8WXU2 420 aa19.05■□□□□ 0.64
BRAT1-206ENST00000493232 TAF4BQ92750 862 aa19.05■□□□□ 0.64
BRAT1-206ENST00000493232 THUMPD2Q9BTF0 503 aaKnown RBP19.05■□□□□ 0.64
BRAT1-206ENST00000493232 CTCFLQ8NI51 663 aaPredicted RBP19.05■□□□□ 0.64
BRAT1-206ENST00000493232 SSH1Q8WYL5 1049 aa19.05■□□□□ 0.64
BRAT1-206ENST00000493232 DNAI2Q9GZS0 605 aa19.05■□□□□ 0.64
BRAT1-206ENST00000493232 SCAND2PQ9GZW5 306 aaPredicted RBP19.05■□□□□ 0.64
BRAT1-206ENST00000493232 RNF41Q9H4P4 317 aaPredicted RBP19.05■□□□□ 0.64
BRAT1-206ENST00000493232 NKTRP30414 1462 aaKnown RBP19.04■□□□□ 0.64
BRAT1-206ENST00000493232 NSD2O96028 1365 aa19.04■□□□□ 0.64
BRAT1-206ENST00000493232 MATR3P43243 847 aaKnown RBP eCLIP19.04■□□□□ 0.64
BRAT1-206ENST00000493232 SLF2Q8IX21 1173 aa19.04■□□□□ 0.64
BRAT1-206ENST00000493232 DBF4Q9UBU7 674 aaPredicted RBP19.04■□□□□ 0.64
BRAT1-206ENST00000493232 DZIP1Q86YF9 867 aaKnown RBP19.04■□□□□ 0.64
BRAT1-206ENST00000493232 ADGRL1O94910 1474 aa19.04■□□□□ 0.64
BRAT1-206ENST00000493232 JAKMIP3Q5VZ66 844 aa19.04■□□□□ 0.64
BRAT1-206ENST00000493232 TTC21BQ7Z4L5 1316 aa19.04■□□□□ 0.64
BRAT1-206ENST00000493232 FAM135AQ9P2D6 1515 aa19.04■□□□□ 0.64
BRAT1-206ENST00000493232 NME9Q86XW9 330 aa19.03■□□□□ 0.64
BRAT1-206ENST00000493232 LRPPRCP42704 1394 aaKnown RBP19.03■□□□□ 0.64
BRAT1-206ENST00000493232 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
BRAT1-206ENST00000493232 PTPRCP08575 1304 aa19.03■□□□□ 0.64
BRAT1-206ENST00000493232 WASLO00401 505 aaPredicted RBP19.03■□□□□ 0.64
BRAT1-206ENST00000493232 KIF14Q15058 1648 aa19.03■□□□□ 0.64
BRAT1-206ENST00000493232 BOLA2Q9H3K6 86 aa19.03■□□□□ 0.64
BRAT1-206ENST00000493232 MINDY4BA8MYZ0 360 aa19.03■□□□□ 0.64
BRAT1-206ENST00000493232 KIAA1328Q86T90 577 aa19.03■□□□□ 0.64
BRAT1-206ENST00000493232 IQCA1Q86XH1 822 aa19.03■□□□□ 0.64
BRAT1-206ENST00000493232 CCDC83Q8IWF9 413 aa19.03■□□□□ 0.64
BRAT1-206ENST00000493232 PIBF1Q8WXW3 757 aa19.03■□□□□ 0.64
BRAT1-206ENST00000493232 RAB34Q9BZG1 259 aa19.02■□□□□ 0.64
BRAT1-206ENST00000493232 ANKRD18BA2A2Z9 1011 aa19.02■□□□□ 0.64
BRAT1-206ENST00000493232 ARHGAP29Q52LW3 1261 aa19.02■□□□□ 0.64
BRAT1-206ENST00000493232 GOLGA6L7A0A1B0GV03 622 aa19.02■□□□□ 0.64
BRAT1-206ENST00000493232 FILIP1Q7Z7B0 1213 aa19.02■□□□□ 0.64
BRAT1-206ENST00000493232 CETN2P41208 172 aa19.02■□□□□ 0.63
BRAT1-206ENST00000493232 CFAP100Q494V2 611 aa19.02■□□□□ 0.63
BRAT1-206ENST00000493232 ANKIB1Q9P2G1 1089 aa19.01■□□□□ 0.63
BRAT1-206ENST00000493232 TRMT112Q9UI30 125 aaKnown RBP19.01■□□□□ 0.63
BRAT1-206ENST00000493232 KIF2AO00139 706 aaPredicted RBP19.01■□□□□ 0.63
BRAT1-206ENST00000493232 FAM177A1Q8N128 213 aaPredicted RBP19.01■□□□□ 0.63
BRAT1-206ENST00000493232 TEX13AQ9BXU3 409 aaPredicted RBP19.01■□□□□ 0.63
BRAT1-206ENST00000493232 TSG101Q99816 390 aa19.01■□□□□ 0.63
BRAT1-206ENST00000493232 KIAA0754O94854 1291 aa19.01■□□□□ 0.63
BRAT1-206ENST00000493232 ANO10Q9NW15 660 aa19.01■□□□□ 0.63
BRAT1-206ENST00000493232 CCDC184Q52MB2 194 aa19.01■□□□□ 0.63
BRAT1-206ENST00000493232 C8orf76Q96K31 380 aa19.01■□□□□ 0.63
BRAT1-206ENST00000493232 AMOTL2Q9Y2J4 779 aa19■□□□□ 0.63
BRAT1-206ENST00000493232 EZRP15311 586 aaKnown RBP19■□□□□ 0.63
BRAT1-206ENST00000493232 ZNF444Q8N0Y2 327 aaPredicted RBP19■□□□□ 0.63
BRAT1-206ENST00000493232 CCDC148Q8NFR7 591 aa19■□□□□ 0.63
BRAT1-206ENST00000493232 ANKRD62A6NC57 917 aa18.99■□□□□ 0.63
BRAT1-206ENST00000493232 FKBP15Q5T1M5 1219 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms