RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 FAM9BQ8IZU0 186 aa22.25■■□□□ 1.15
RER1-208ENST00000493207 RRP7AQ9Y3A4 280 aaKnown RBP22.25■■□□□ 1.15
RER1-208ENST00000493207 CEMIPQ8WUJ3 1361 aa22.25■■□□□ 1.15
RER1-208ENST00000493207 PALLDQ8WX93 1383 aa22.25■■□□□ 1.15
RER1-208ENST00000493207 CCER2I3L3R5 266 aa22.24■■□□□ 1.15
RER1-208ENST00000493207 HTATSF1O43719 755 aaKnown RBP22.24■■□□□ 1.15
RER1-208ENST00000493207 TMPOP42166 694 aaKnown RBP22.24■■□□□ 1.15
RER1-208ENST00000493207 RIPK4P57078 832 aa22.24■■□□□ 1.15
RER1-208ENST00000493207 DCTN1Q14203 1278 aa22.24■■□□□ 1.15
RER1-208ENST00000493207 TXNRD1Q16881 649 aa22.24■■□□□ 1.15
RER1-208ENST00000493207 PROM2Q8N271 834 aa22.24■■□□□ 1.15
RER1-208ENST00000493207 ASAP1Q9ULH1 1129 aa22.24■■□□□ 1.15
RER1-208ENST00000493207 TEFQ10587 303 aa22.23■■□□□ 1.15
RER1-208ENST00000493207 NEUROD2Q15784 382 aa22.23■■□□□ 1.15
RER1-208ENST00000493207 PAPPAQ13219 1627 aa22.23■■□□□ 1.15
RER1-208ENST00000493207 SMARCC1Q92922 1105 aaPredicted RBP22.22■■□□□ 1.15
RER1-208ENST00000493207 ATG3Q9NT62 314 aa22.22■■□□□ 1.15
RER1-208ENST00000493207 APAF1O14727 1248 aa22.21■■□□□ 1.15
RER1-208ENST00000493207 KCNQ4P56696 695 aa22.19■■□□□ 1.14
RER1-208ENST00000493207 THUMPD2Q9BTF0 503 aaKnown RBP22.19■■□□□ 1.14
RER1-208ENST00000493207 CCNL1Q9UK58 526 aaPredicted RBP22.19■■□□□ 1.14
RER1-208ENST00000493207 C5P01031 1676 aa22.18■■□□□ 1.14
RER1-208ENST00000493207 LMOD3Q0VAK6 560 aa22.18■■□□□ 1.14
RER1-208ENST00000493207 SLC27A3Q5K4L6 730 aa22.18■■□□□ 1.14
RER1-208ENST00000493207 LRRC4BQ9NT99 713 aa22.18■■□□□ 1.14
RER1-208ENST00000493207 TAF1LQ8IZX4 1826 aa22.17■■□□□ 1.14
RER1-208ENST00000493207 SENP3-EIF4A1A0A087X0R7 540 aa22.17■■□□□ 1.14
RER1-208ENST00000493207 SLC39A6Q13433 755 aa22.17■■□□□ 1.14
RER1-208ENST00000493207 UBR2Q8IWV8 1755 aa22.17■■□□□ 1.14
RER1-208ENST00000493207 RBM42Q9BTD8 480 aaKnown RBP22.16■■□□□ 1.14
RER1-208ENST00000493207 LOC102724428A0A0B4J2F2 783 aa22.15■■□□□ 1.14
RER1-208ENST00000493207 PTCD1O75127 700 aaKnown RBP22.15■■□□□ 1.14
RER1-208ENST00000493207 SIK1P57059 783 aa22.15■■□□□ 1.14
RER1-208ENST00000493207 TRIM35Q9UPQ4 493 aa22.15■■□□□ 1.14
RER1-208ENST00000493207 ZNF831Q5JPB2 1677 aa22.14■■□□□ 1.14
RER1-208ENST00000493207 BTBD11A6QL63 1104 aa22.14■■□□□ 1.13
RER1-208ENST00000493207 KCPQ6ZWJ8 1503 aa22.14■■□□□ 1.13
RER1-208ENST00000493207 TTC5Q8N0Z6 440 aa22.13■■□□□ 1.13
RER1-208ENST00000493207 KDM3BQ7LBC6 1761 aa22.12■■□□□ 1.13
RER1-208ENST00000493207 ATP6V1AP38606 617 aa22.12■■□□□ 1.13
RER1-208ENST00000493207 TAF7Q15545 349 aaPredicted RBP22.12■■□□□ 1.13
RER1-208ENST00000493207 NBPF14Q5TI25 921 aa22.12■■□□□ 1.13
RER1-208ENST00000493207 ZNF790Q6PG37 636 aa22.12■■□□□ 1.13
RER1-208ENST00000493207 ANO8Q9HCE9 1232 aaPredicted RBP22.12■■□□□ 1.13
RER1-208ENST00000493207 TJP1Q07157 1748 aa22.11■■□□□ 1.13
RER1-208ENST00000493207 SLC4A9Q96Q91 983 aa22.11■■□□□ 1.13
RER1-208ENST00000493207 COL5A3P25940 1745 aaPredicted RBP22.11■■□□□ 1.13
RER1-208ENST00000493207 C4BP0C0L5 1744 aa22.1■■□□□ 1.13
RER1-208ENST00000493207 MIS18AQ9NYP9 233 aa22.1■■□□□ 1.13
RER1-208ENST00000493207 CICQ96RK0 1608 aaPredicted RBP22.09■■□□□ 1.13
RER1-208ENST00000493207 KCNQ3O43525 872 aa22.09■■□□□ 1.13
RER1-208ENST00000493207 ITPK1Q13572 414 aa22.09■■□□□ 1.13
RER1-208ENST00000493207 TUBGCP6Q96RT7 1819 aa22.08■■□□□ 1.13
RER1-208ENST00000493207 ZNF827Q17R98 1081 aa22.08■■□□□ 1.13
RER1-208ENST00000493207 LINC00116Q8NCU8 138 aa22.08■■□□□ 1.13
RER1-208ENST00000493207 STK32BQ9NY57 414 aa22.08■■□□□ 1.13
RER1-208ENST00000493207 PSDA5PKW4 1024 aaPredicted RBP22.07■■□□□ 1.12
RER1-208ENST00000493207 R3HDM1Q15032 1099 aaKnown RBP22.07■■□□□ 1.12
RER1-208ENST00000493207 ZNF496Q96IT1 587 aaPredicted RBP22.07■■□□□ 1.12
RER1-208ENST00000493207 SALL2Q9Y467 1007 aaPredicted RBP22.07■■□□□ 1.12
RER1-208ENST00000493207 SLC15A2Q16348 729 aa22.06■■□□□ 1.12
RER1-208ENST00000493207 AKT1S1Q96B36 256 aa22.06■■□□□ 1.12
RER1-208ENST00000493207 LAS1LQ9Y4W2 734 aaKnown RBP22.06■■□□□ 1.12
RER1-208ENST00000493207 FMNL2Q96PY5 1086 aa22.05■■□□□ 1.12
RER1-208ENST00000493207 HEG1Q9ULI3 1381 aa22.04■■□□□ 1.12
RER1-208ENST00000493207 QSER1Q2KHR3 1735 aa22.04■■□□□ 1.12
RER1-208ENST00000493207 HMGB2P26583 209 aaKnown RBP22.04■■□□□ 1.12
RER1-208ENST00000493207 CCDC27Q2M243 656 aa22.04■■□□□ 1.12
RER1-208ENST00000493207 TSPYL4Q9UJ04 414 aa22.04■■□□□ 1.12
RER1-208ENST00000493207 WWC1Q8IX03 1113 aa22.03■■□□□ 1.12
RER1-208ENST00000493207 DNAJC10Q8IXB1 793 aa22.03■■□□□ 1.12
RER1-208ENST00000493207 VSIG10Q8N0Z9 540 aa22.03■■□□□ 1.12
RER1-208ENST00000493207 UBR3Q6ZT12 1888 aa22.03■■□□□ 1.12
RER1-208ENST00000493207 CALD1Q05682 793 aaKnown RBP22.02■■□□□ 1.12
RER1-208ENST00000493207 NCBP3Q53F19 620 aaKnown RBP22.02■■□□□ 1.12
RER1-208ENST00000493207 AK7Q96M32 723 aa22.02■■□□□ 1.12
RER1-208ENST00000493207 TFCP2L1Q9NZI6 479 aa22.02■■□□□ 1.12
RER1-208ENST00000493207 MYH14Q7Z406 1995 aaKnown RBP22.01■■□□□ 1.11
RER1-208ENST00000493207 BABAM1Q9NWV8 329 aa22.01■■□□□ 1.11
RER1-208ENST00000493207 CHL1O00533 1208 aa22■■□□□ 1.11
RER1-208ENST00000493207 CASZ1Q86V15 1759 aa21.99■■□□□ 1.11
RER1-208ENST00000493207 EIF4A1P60842 406 aaKnown RBP21.99■■□□□ 1.11
RER1-208ENST00000493207 CFAP44Q96MT7 982 aa21.99■■□□□ 1.11
RER1-208ENST00000493207 CNTNAP4Q9C0A0 1308 aa21.99■■□□□ 1.11
RER1-208ENST00000493207 LAMB4A4D0S4 1761 aa21.99■■□□□ 1.11
RER1-208ENST00000493207 PRAMEF22A3QJZ6 481 aa21.98■■□□□ 1.11
RER1-208ENST00000493207 GNPATO15228 680 aa21.98■■□□□ 1.11
RER1-208ENST00000493207 CYP19A1P11511 503 aaPredicted RBP21.98■■□□□ 1.11
RER1-208ENST00000493207 CRKLP46109 303 aaKnown RBP21.98■■□□□ 1.11
RER1-208ENST00000493207 NGEFQ8N5V2 710 aa21.98■■□□□ 1.11
RER1-208ENST00000493207 IFT57Q9NWB7 429 aa21.98■■□□□ 1.11
RER1-208ENST00000493207 SNRPA1P09661 255 aaKnown RBP21.97■■□□□ 1.11
RER1-208ENST00000493207 ZNF853P0CG23 659 aa21.97■■□□□ 1.11
RER1-208ENST00000493207 GNAI1P63096 354 aa21.97■■□□□ 1.11
RER1-208ENST00000493207 RC3H1Q5TC82 1133 aaKnown RBP21.97■■□□□ 1.11
RER1-208ENST00000493207 PNPLA7Q6ZV29 1317 aa21.97■■□□□ 1.11
RER1-208ENST00000493207 PHF14O94880 888 aa21.96■■□□□ 1.11
RER1-208ENST00000493207 SMIM5Q71RC9 77 aa21.96■■□□□ 1.11
RER1-208ENST00000493207 AMIGO3Q86WK7 504 aa21.96■■□□□ 1.11
RER1-208ENST00000493207 TEX13AQ9BXU3 409 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms