RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CCNL1Q9UK58 526 aaPredicted RBP16.97■□□□□ 0.31
CLIP2-209ENST00000493166 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.31
CLIP2-209ENST00000493166 PLEKHF1Q96S99 279 aa16.96■□□□□ 0.31
CLIP2-209ENST00000493166 LRRC4BQ9NT99 713 aa16.96■□□□□ 0.31
CLIP2-209ENST00000493166 ASAP1Q9ULH1 1129 aa16.96■□□□□ 0.31
CLIP2-209ENST00000493166 UBR2Q8IWV8 1755 aa16.95■□□□□ 0.3
CLIP2-209ENST00000493166 KCNQ4P56696 695 aa16.95■□□□□ 0.3
CLIP2-209ENST00000493166 SLC52A2Q9HAB3 445 aa16.95■□□□□ 0.3
CLIP2-209ENST00000493166 ANO8Q9HCE9 1232 aaPredicted RBP16.95■□□□□ 0.3
CLIP2-209ENST00000493166 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
CLIP2-209ENST00000493166 C4BP0C0L5 1744 aa16.95■□□□□ 0.3
CLIP2-209ENST00000493166 COL5A3P25940 1745 aaPredicted RBP16.95■□□□□ 0.3
CLIP2-209ENST00000493166 CASZ1Q86V15 1759 aa16.94■□□□□ 0.3
CLIP2-209ENST00000493166 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
CLIP2-209ENST00000493166 RTF1Q92541 710 aaKnown RBP16.93■□□□□ 0.3
CLIP2-209ENST00000493166 LOC102724428A0A0B4J2F2 783 aa16.92■□□□□ 0.3
CLIP2-209ENST00000493166 SIK1P57059 783 aa16.92■□□□□ 0.3
CLIP2-209ENST00000493166 TEFQ10587 303 aa16.92■□□□□ 0.3
CLIP2-209ENST00000493166 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
CLIP2-209ENST00000493166 ADAMTS8Q9UP79 889 aa16.92■□□□□ 0.3
CLIP2-209ENST00000493166 TJP1Q07157 1748 aa16.92■□□□□ 0.3
CLIP2-209ENST00000493166 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
CLIP2-209ENST00000493166 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
CLIP2-209ENST00000493166 CEMIPQ8WUJ3 1361 aa16.91■□□□□ 0.3
CLIP2-209ENST00000493166 HMGB2P26583 209 aaKnown RBP16.91■□□□□ 0.3
CLIP2-209ENST00000493166 NFE2L2Q16236 605 aa16.91■□□□□ 0.3
CLIP2-209ENST00000493166 SLC15A2Q16348 729 aa16.91■□□□□ 0.3
CLIP2-209ENST00000493166 CCDC184Q52MB2 194 aa16.91■□□□□ 0.3
CLIP2-209ENST00000493166 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
CLIP2-209ENST00000493166 HTATSF1O43719 755 aaKnown RBP16.9■□□□□ 0.3
CLIP2-209ENST00000493166 ZNF827Q17R98 1081 aa16.9■□□□□ 0.3
CLIP2-209ENST00000493166 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
CLIP2-209ENST00000493166 MRS2Q9HD23 443 aa16.9■□□□□ 0.3
CLIP2-209ENST00000493166 ATP6V1AP38606 617 aa16.89■□□□□ 0.29
CLIP2-209ENST00000493166 MCM10Q7L590 875 aa16.89■□□□□ 0.29
CLIP2-209ENST00000493166 RUNDC1Q96C34 613 aa16.89■□□□□ 0.29
CLIP2-209ENST00000493166 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.29
CLIP2-209ENST00000493166 PTCD1O75127 700 aaKnown RBP16.88■□□□□ 0.29
CLIP2-209ENST00000493166 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
CLIP2-209ENST00000493166 LRP5O75197 1615 aa16.88■□□□□ 0.29
CLIP2-209ENST00000493166 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
CLIP2-209ENST00000493166 SLC39A6Q13433 755 aa16.87■□□□□ 0.29
CLIP2-209ENST00000493166 DCTN1Q14203 1278 aa16.87■□□□□ 0.29
CLIP2-209ENST00000493166 MYH14Q7Z406 1995 aaKnown RBP16.87■□□□□ 0.29
CLIP2-209ENST00000493166 TMPOP42166 694 aaKnown RBP16.86■□□□□ 0.29
CLIP2-209ENST00000493166 ITPK1Q13572 414 aa16.86■□□□□ 0.29
CLIP2-209ENST00000493166 TTC5Q8N0Z6 440 aa16.86■□□□□ 0.29
CLIP2-209ENST00000493166 TFCP2L1Q9NZI6 479 aa16.86■□□□□ 0.29
CLIP2-209ENST00000493166 RIPK4P57078 832 aa16.85■□□□□ 0.29
CLIP2-209ENST00000493166 LINC00116Q8NCU8 138 aa16.85■□□□□ 0.29
CLIP2-209ENST00000493166 AK7Q96M32 723 aa16.85■□□□□ 0.29
CLIP2-209ENST00000493166 SLC4A9Q96Q91 983 aa16.85■□□□□ 0.29
CLIP2-209ENST00000493166 BTBD11A6QL63 1104 aa16.84■□□□□ 0.29
CLIP2-209ENST00000493166 LMOD3Q0VAK6 560 aa16.84■□□□□ 0.29
CLIP2-209ENST00000493166 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
CLIP2-209ENST00000493166 NEUROD2Q15784 382 aa16.83■□□□□ 0.28
CLIP2-209ENST00000493166 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
CLIP2-209ENST00000493166 PNISRQ8TF01 805 aaKnown RBP16.83■□□□□ 0.28
CLIP2-209ENST00000493166 PDGFDQ9GZP0 370 aaPredicted RBP16.83■□□□□ 0.28
CLIP2-209ENST00000493166 PNPLA7Q6ZV29 1317 aa16.82■□□□□ 0.28
CLIP2-209ENST00000493166 THUMPD2Q9BTF0 503 aaKnown RBP16.82■□□□□ 0.28
CLIP2-209ENST00000493166 LAMB4A4D0S4 1761 aa16.82■□□□□ 0.28
CLIP2-209ENST00000493166 C4AP0C0L4 1744 aa16.82■□□□□ 0.28
CLIP2-209ENST00000493166 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
CLIP2-209ENST00000493166 COL24A1Q17RW2 1714 aa16.81■□□□□ 0.28
CLIP2-209ENST00000493166 CNTNAP4Q9C0A0 1308 aa16.8■□□□□ 0.28
CLIP2-209ENST00000493166 GNPATO15228 680 aa16.8■□□□□ 0.28
CLIP2-209ENST00000493166 HEG1Q9ULI3 1381 aa16.79■□□□□ 0.28
CLIP2-209ENST00000493166 APAF1O14727 1248 aa16.79■□□□□ 0.28
CLIP2-209ENST00000493166 MSH5O43196 834 aa16.79■□□□□ 0.28
CLIP2-209ENST00000493166 ZBTB7AO95365 584 aa16.79■□□□□ 0.28
CLIP2-209ENST00000493166 DNAJC10Q8IXB1 793 aa16.79■□□□□ 0.28
CLIP2-209ENST00000493166 VSIG10Q8N0Z9 540 aa16.79■□□□□ 0.28
CLIP2-209ENST00000493166 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
CLIP2-209ENST00000493166 FMNL2Q96PY5 1086 aa16.79■□□□□ 0.28
CLIP2-209ENST00000493166 KCNQ3O43525 872 aa16.78■□□□□ 0.28
CLIP2-209ENST00000493166 PHF14O94880 888 aa16.78■□□□□ 0.28
CLIP2-209ENST00000493166 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
CLIP2-209ENST00000493166 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
CLIP2-209ENST00000493166 FLAD1Q8NFF5 587 aa16.78■□□□□ 0.28
CLIP2-209ENST00000493166 SPON1Q9HCB6 807 aa16.78■□□□□ 0.28
CLIP2-209ENST00000493166 SSFA2P28290 1259 aa16.77■□□□□ 0.28
CLIP2-209ENST00000493166 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.28
CLIP2-209ENST00000493166 COL23A1Q86Y22 540 aaPredicted RBP16.77■□□□□ 0.28
CLIP2-209ENST00000493166 MTFR1LQ9H019 292 aa16.77■□□□□ 0.28
CLIP2-209ENST00000493166 MIS18AQ9NYP9 233 aa16.77■□□□□ 0.28
CLIP2-209ENST00000493166 TRIM35Q9UPQ4 493 aa16.77■□□□□ 0.28
CLIP2-209ENST00000493166 RTCBQ9Y3I0 505 aaKnown RBP16.77■□□□□ 0.28
CLIP2-209ENST00000493166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.76■□□□□ 0.27
CLIP2-209ENST00000493166 AMIGO3Q86WK7 504 aa16.76■□□□□ 0.27
CLIP2-209ENST00000493166 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
CLIP2-209ENST00000493166 SLC16A10Q8TF71 515 aa16.76■□□□□ 0.27
CLIP2-209ENST00000493166 CYP19A1P11511 503 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-209ENST00000493166 SMIM5Q71RC9 77 aa16.75■□□□□ 0.27
CLIP2-209ENST00000493166 TEX13AQ9BXU3 409 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-209ENST00000493166 ATF5Q9Y2D1 282 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-209ENST00000493166 RPS6KA4O75676 772 aa16.74■□□□□ 0.27
CLIP2-209ENST00000493166 STARD3NLO95772 234 aa16.74■□□□□ 0.27
CLIP2-209ENST00000493166 CCDC87Q9NVE4 849 aa16.74■□□□□ 0.27
CLIP2-209ENST00000493166 TSPYL4Q9UJ04 414 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms