RNA–Protein interactions for RNA: ENST00000492021.6

PDPK1-213, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-213ENST00000492021 APAF1O14727 1248 aa25.47■■□□□ 1.67
PDPK1-213ENST00000492021 EN1Q05925 392 aaPredicted RBP25.47■■□□□ 1.67
PDPK1-213ENST00000492021 TEFQ10587 303 aa25.47■■□□□ 1.67
PDPK1-213ENST00000492021 MCM10Q7L590 875 aa25.47■■□□□ 1.67
PDPK1-213ENST00000492021 NFATC2IPQ8NCF5 419 aa25.47■■□□□ 1.67
PDPK1-213ENST00000492021 RREB1Q92766 1687 aa25.47■■□□□ 1.67
PDPK1-213ENST00000492021 PAPPAQ13219 1627 aa25.47■■□□□ 1.67
PDPK1-213ENST00000492021 LY75O60449 1722 aa25.46■■□□□ 1.67
PDPK1-213ENST00000492021 SMARCC1Q92922 1105 aaPredicted RBP25.46■■□□□ 1.67
PDPK1-213ENST00000492021 RRP7AQ9Y3A4 280 aaKnown RBP25.46■■□□□ 1.67
PDPK1-213ENST00000492021 PALLDQ8WX93 1383 aa25.44■■□□□ 1.66
PDPK1-213ENST00000492021 DCTN1Q14203 1278 aa25.44■■□□□ 1.66
PDPK1-213ENST00000492021 EZH2Q15910 746 aaKnown RBP25.43■■□□□ 1.66
PDPK1-213ENST00000492021 NCBP3Q53F19 620 aaKnown RBP25.43■■□□□ 1.66
PDPK1-213ENST00000492021 ATG3Q9NT62 314 aa25.43■■□□□ 1.66
PDPK1-213ENST00000492021 TRIM35Q9UPQ4 493 aa25.43■■□□□ 1.66
PDPK1-213ENST00000492021 NEUROD2Q15784 382 aa25.42■■□□□ 1.66
PDPK1-213ENST00000492021 ASAP1Q9ULH1 1129 aa25.42■■□□□ 1.66
PDPK1-213ENST00000492021 TXNRD1Q16881 649 aa25.4■■□□□ 1.66
PDPK1-213ENST00000492021 SLC27A3Q5K4L6 730 aa25.4■■□□□ 1.66
PDPK1-213ENST00000492021 NUP188Q5SRE5 1749 aa25.4■■□□□ 1.66
PDPK1-213ENST00000492021 PROM2Q8N271 834 aa25.39■■□□□ 1.66
PDPK1-213ENST00000492021 ZNF831Q5JPB2 1677 aa25.39■■□□□ 1.65
PDPK1-213ENST00000492021 CCDC27Q2M243 656 aa25.38■■□□□ 1.65
PDPK1-213ENST00000492021 THUMPD2Q9BTF0 503 aaKnown RBP25.38■■□□□ 1.65
PDPK1-213ENST00000492021 UBR2Q8IWV8 1755 aa25.38■■□□□ 1.65
PDPK1-213ENST00000492021 TAF7Q15545 349 aaPredicted RBP25.37■■□□□ 1.65
PDPK1-213ENST00000492021 NGEFQ8N5V2 710 aa25.37■■□□□ 1.65
PDPK1-213ENST00000492021 KCPQ6ZWJ8 1503 aa25.37■■□□□ 1.65
PDPK1-213ENST00000492021 CICQ96RK0 1608 aaPredicted RBP25.36■■□□□ 1.65
PDPK1-213ENST00000492021 LOC102724428A0A0B4J2F2 783 aa25.35■■□□□ 1.65
PDPK1-213ENST00000492021 BTBD11A6QL63 1104 aa25.35■■□□□ 1.65
PDPK1-213ENST00000492021 SIK1P57059 783 aa25.35■■□□□ 1.65
PDPK1-213ENST00000492021 CCNL1Q9UK58 526 aaPredicted RBP25.35■■□□□ 1.65
PDPK1-213ENST00000492021 KDM3BQ7LBC6 1761 aa25.34■■□□□ 1.65
PDPK1-213ENST00000492021 SLC39A6Q13433 755 aa25.34■■□□□ 1.65
PDPK1-213ENST00000492021 ZNF790Q6PG37 636 aa25.34■■□□□ 1.65
PDPK1-213ENST00000492021 LRRC4BQ9NT99 713 aa25.34■■□□□ 1.65
PDPK1-213ENST00000492021 TTC5Q8N0Z6 440 aa25.33■■□□□ 1.65
PDPK1-213ENST00000492021 CALD1Q05682 793 aaKnown RBP25.32■■□□□ 1.64
PDPK1-213ENST00000492021 BABAM1Q9NWV8 329 aa25.32■■□□□ 1.64
PDPK1-213ENST00000492021 C5P01031 1676 aa25.32■■□□□ 1.64
PDPK1-213ENST00000492021 HMGB2P26583 209 aaKnown RBP25.31■■□□□ 1.64
PDPK1-213ENST00000492021 PTCD1O75127 700 aaKnown RBP25.3■■□□□ 1.64
PDPK1-213ENST00000492021 WWC1Q8IX03 1113 aa25.3■■□□□ 1.64
PDPK1-213ENST00000492021 SLC4A9Q96Q91 983 aa25.3■■□□□ 1.64
PDPK1-213ENST00000492021 RBM42Q9BTD8 480 aaKnown RBP25.3■■□□□ 1.64
PDPK1-213ENST00000492021 TAF1LQ8IZX4 1826 aa25.3■■□□□ 1.64
PDPK1-213ENST00000492021 TJP1Q07157 1748 aa25.29■■□□□ 1.64
PDPK1-213ENST00000492021 SENP3-EIF4A1A0A087X0R7 540 aa25.28■■□□□ 1.64
PDPK1-213ENST00000492021 ATP6V1AP38606 617 aa25.28■■□□□ 1.64
PDPK1-213ENST00000492021 VSIG10Q8N0Z9 540 aa25.28■■□□□ 1.64
PDPK1-213ENST00000492021 COL5A3P25940 1745 aaPredicted RBP25.27■■□□□ 1.64
PDPK1-213ENST00000492021 KCNQ4P56696 695 aa25.27■■□□□ 1.64
PDPK1-213ENST00000492021 ZNF496Q96IT1 587 aaPredicted RBP25.27■■□□□ 1.64
PDPK1-213ENST00000492021 FMNL2Q96PY5 1086 aa25.27■■□□□ 1.64
PDPK1-213ENST00000492021 CHL1O00533 1208 aa25.26■■□□□ 1.63
PDPK1-213ENST00000492021 KCNQ3O43525 872 aa25.26■■□□□ 1.63
PDPK1-213ENST00000492021 ITPK1Q13572 414 aa25.26■■□□□ 1.63
PDPK1-213ENST00000492021 CFAP44Q96MT7 982 aa25.26■■□□□ 1.63
PDPK1-213ENST00000492021 IFT57Q9NWB7 429 aa25.26■■□□□ 1.63
PDPK1-213ENST00000492021 MIS18AQ9NYP9 233 aa25.26■■□□□ 1.63
PDPK1-213ENST00000492021 TSPYL4Q9UJ04 414 aa25.26■■□□□ 1.63
PDPK1-213ENST00000492021 HEG1Q9ULI3 1381 aa25.26■■□□□ 1.63
PDPK1-213ENST00000492021 ZNF853P0CG23 659 aa25.25■■□□□ 1.63
PDPK1-213ENST00000492021 IL16Q14005 1332 aa25.25■■□□□ 1.63
PDPK1-213ENST00000492021 C4BP0C0L5 1744 aa25.25■■□□□ 1.63
PDPK1-213ENST00000492021 NBPF14Q5TI25 921 aa25.24■■□□□ 1.63
PDPK1-213ENST00000492021 WDR63Q8IWG1 891 aa25.24■■□□□ 1.63
PDPK1-213ENST00000492021 ANO8Q9HCE9 1232 aaPredicted RBP25.24■■□□□ 1.63
PDPK1-213ENST00000492021 SALL2Q9Y467 1007 aaPredicted RBP25.24■■□□□ 1.63
PDPK1-213ENST00000492021 ZNF521Q96K83 1311 aa25.23■■□□□ 1.63
PDPK1-213ENST00000492021 GNAI1P63096 354 aa25.23■■□□□ 1.63
PDPK1-213ENST00000492021 LINC00116Q8NCU8 138 aa25.23■■□□□ 1.63
PDPK1-213ENST00000492021 AKT1S1Q96B36 256 aa25.22■■□□□ 1.63
PDPK1-213ENST00000492021 EIF4A1P60842 406 aaKnown RBP25.21■■□□□ 1.63
PDPK1-213ENST00000492021 STK32BQ9NY57 414 aa25.21■■□□□ 1.63
PDPK1-213ENST00000492021 LAS1LQ9Y4W2 734 aaKnown RBP25.21■■□□□ 1.63
PDPK1-213ENST00000492021 SLC15A2Q16348 729 aa25.2■■□□□ 1.62
PDPK1-213ENST00000492021 ZNF827Q17R98 1081 aa25.2■■□□□ 1.62
PDPK1-213ENST00000492021 DNAJC10Q8IXB1 793 aa25.2■■□□□ 1.62
PDPK1-213ENST00000492021 TEX13AQ9BXU3 409 aaPredicted RBP25.2■■□□□ 1.62
PDPK1-213ENST00000492021 CNTNAP4Q9C0A0 1308 aa25.19■■□□□ 1.62
PDPK1-213ENST00000492021 MBIPQ9NS73 344 aa25.19■■□□□ 1.62
PDPK1-213ENST00000492021 QSER1Q2KHR3 1735 aa25.19■■□□□ 1.62
PDPK1-213ENST00000492021 SNRPA1P09661 255 aaKnown RBP25.18■■□□□ 1.62
PDPK1-213ENST00000492021 RC3H1Q5TC82 1133 aaKnown RBP25.18■■□□□ 1.62
PDPK1-213ENST00000492021 LAMB4A4D0S4 1761 aa25.18■■□□□ 1.62
PDPK1-213ENST00000492021 CYP19A1P11511 503 aaPredicted RBP25.17■■□□□ 1.62
PDPK1-213ENST00000492021 AK7Q96M32 723 aa25.16■■□□□ 1.62
PDPK1-213ENST00000492021 TUBGCP6Q96RT7 1819 aa25.16■■□□□ 1.62
PDPK1-213ENST00000492021 GIGYF1O75420 1035 aaPredicted RBP25.15■■□□□ 1.62
PDPK1-213ENST00000492021 STARD3NLO95772 234 aa25.15■■□□□ 1.62
PDPK1-213ENST00000492021 CRKLP46109 303 aaKnown RBP25.15■■□□□ 1.62
PDPK1-213ENST00000492021 UBR3Q6ZT12 1888 aa25.15■■□□□ 1.62
PDPK1-213ENST00000492021 R3HDM1Q15032 1099 aaKnown RBP25.13■■□□□ 1.61
PDPK1-213ENST00000492021 CCDC87Q9NVE4 849 aa25.13■■□□□ 1.61
PDPK1-213ENST00000492021 TFCP2L1Q9NZI6 479 aa25.13■■□□□ 1.61
PDPK1-213ENST00000492021 MYH14Q7Z406 1995 aaKnown RBP25.13■■□□□ 1.61
PDPK1-213ENST00000492021 PRAMEF22A3QJZ6 481 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms