RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 TEFQ10587 303 aa30.57■■■□□ 2.48
SCN5A-213ENST00000491944 SLC52A2Q9HAB3 445 aa30.57■■■□□ 2.48
SCN5A-213ENST00000491944 DEFB132Q7Z7B7 95 aa30.54■■■□□ 2.48
SCN5A-213ENST00000491944 THUMPD2Q9BTF0 503 aaKnown RBP30.54■■■□□ 2.48
SCN5A-213ENST00000491944 SIPA1L3O60292 1781 aaPredicted RBP30.54■■■□□ 2.48
SCN5A-213ENST00000491944 EN1Q05925 392 aaPredicted RBP30.52■■■□□ 2.48
SCN5A-213ENST00000491944 TRIM35Q9UPQ4 493 aa30.52■■■□□ 2.48
SCN5A-213ENST00000491944 ASAP1Q9ULH1 1129 aa30.51■■■□□ 2.47
SCN5A-213ENST00000491944 RGPD3A6NKT7 1758 aaPredicted RBP30.5■■■□□ 2.47
SCN5A-213ENST00000491944 RGPD4Q7Z3J3 1758 aa30.5■■■□□ 2.47
SCN5A-213ENST00000491944 PLSCR1O15162 318 aa30.49■■■□□ 2.47
SCN5A-213ENST00000491944 SMARCC1Q92922 1105 aaPredicted RBP30.49■■■□□ 2.47
SCN5A-213ENST00000491944 PALLDQ8WX93 1383 aa30.48■■■□□ 2.47
SCN5A-213ENST00000491944 ATG3Q9NT62 314 aa30.48■■■□□ 2.47
SCN5A-213ENST00000491944 SALL2Q9Y467 1007 aaPredicted RBP30.48■■■□□ 2.47
SCN5A-213ENST00000491944 LY75O60449 1722 aa30.46■■■□□ 2.47
SCN5A-213ENST00000491944 PAPPAQ13219 1627 aa30.46■■■□□ 2.47
SCN5A-213ENST00000491944 EZH2Q15910 746 aaKnown RBP30.46■■■□□ 2.47
SCN5A-213ENST00000491944 CAMKK2Q96RR4 588 aa30.46■■■□□ 2.47
SCN5A-213ENST00000491944 BTBD11A6QL63 1104 aa30.44■■■□□ 2.46
SCN5A-213ENST00000491944 SLC39A6Q13433 755 aa30.44■■■□□ 2.46
SCN5A-213ENST00000491944 TAF7Q15545 349 aaPredicted RBP30.44■■■□□ 2.46
SCN5A-213ENST00000491944 TXNRD1Q16881 649 aa30.41■■■□□ 2.46
SCN5A-213ENST00000491944 CCDC27Q2M243 656 aa30.41■■■□□ 2.46
SCN5A-213ENST00000491944 TTC5Q8N0Z6 440 aa30.41■■■□□ 2.46
SCN5A-213ENST00000491944 RREB1Q92766 1687 aa30.41■■■□□ 2.46
SCN5A-213ENST00000491944 RBM42Q9BTD8 480 aaKnown RBP30.41■■■□□ 2.46
SCN5A-213ENST00000491944 PTCD1O75127 700 aaKnown RBP30.4■■■□□ 2.46
SCN5A-213ENST00000491944 NCBP3Q53F19 620 aaKnown RBP30.4■■■□□ 2.46
SCN5A-213ENST00000491944 MIS18AQ9NYP9 233 aa30.4■■■□□ 2.46
SCN5A-213ENST00000491944 CALD1Q05682 793 aaKnown RBP30.39■■■□□ 2.45
SCN5A-213ENST00000491944 ZNF790Q6PG37 636 aa30.39■■■□□ 2.45
SCN5A-213ENST00000491944 WWC1Q8IX03 1113 aa30.39■■■□□ 2.45
SCN5A-213ENST00000491944 PROM2Q8N271 834 aa30.39■■■□□ 2.45
SCN5A-213ENST00000491944 NGEFQ8N5V2 710 aa30.39■■■□□ 2.45
SCN5A-213ENST00000491944 CCNL1Q9UK58 526 aaPredicted RBP30.39■■■□□ 2.45
SCN5A-213ENST00000491944 LAS1LQ9Y4W2 734 aaKnown RBP30.39■■■□□ 2.45
SCN5A-213ENST00000491944 UBR2Q8IWV8 1755 aa30.38■■■□□ 2.45
SCN5A-213ENST00000491944 LOC102724428A0A0B4J2F2 783 aa30.38■■■□□ 2.45
SCN5A-213ENST00000491944 KCNQ4P56696 695 aa30.38■■■□□ 2.45
SCN5A-213ENST00000491944 SIK1P57059 783 aa30.38■■■□□ 2.45
SCN5A-213ENST00000491944 KDM3BQ7LBC6 1761 aa30.37■■■□□ 2.45
SCN5A-213ENST00000491944 NUP188Q5SRE5 1749 aa30.36■■■□□ 2.45
SCN5A-213ENST00000491944 KCPQ6ZWJ8 1503 aa30.36■■■□□ 2.45
SCN5A-213ENST00000491944 KCNQ3O43525 872 aa30.36■■■□□ 2.45
SCN5A-213ENST00000491944 SLC27A3Q5K4L6 730 aa30.36■■■□□ 2.45
SCN5A-213ENST00000491944 TSPYL4Q9UJ04 414 aa30.35■■■□□ 2.45
SCN5A-213ENST00000491944 LRRC4BQ9NT99 713 aa30.34■■■□□ 2.45
SCN5A-213ENST00000491944 ATP6V1AP38606 617 aa30.33■■■□□ 2.45
SCN5A-213ENST00000491944 C5P01031 1676 aa30.32■■■□□ 2.44
SCN5A-213ENST00000491944 ZNF496Q96IT1 587 aaPredicted RBP30.31■■■□□ 2.44
SCN5A-213ENST00000491944 FMNL2Q96PY5 1086 aa30.31■■■□□ 2.44
SCN5A-213ENST00000491944 BABAM1Q9NWV8 329 aa30.31■■■□□ 2.44
SCN5A-213ENST00000491944 TAF1LQ8IZX4 1826 aa30.31■■■□□ 2.44
SCN5A-213ENST00000491944 ZNF831Q5JPB2 1677 aa30.31■■■□□ 2.44
SCN5A-213ENST00000491944 CFAP44Q96MT7 982 aa30.3■■■□□ 2.44
SCN5A-213ENST00000491944 SLC4A9Q96Q91 983 aa30.3■■■□□ 2.44
SCN5A-213ENST00000491944 IFT57Q9NWB7 429 aa30.3■■■□□ 2.44
SCN5A-213ENST00000491944 CHL1O00533 1208 aa30.29■■■□□ 2.44
SCN5A-213ENST00000491944 GNAI1P63096 354 aa30.29■■■□□ 2.44
SCN5A-213ENST00000491944 TJP1Q07157 1748 aa30.29■■■□□ 2.44
SCN5A-213ENST00000491944 HNRNPUQ00839 825 aaKnown RBP eCLIP30.28■■■□□ 2.44
SCN5A-213ENST00000491944 WDR63Q8IWG1 891 aa30.28■■■□□ 2.44
SCN5A-213ENST00000491944 ITPK1Q13572 414 aa30.28■■■□□ 2.44
SCN5A-213ENST00000491944 HEG1Q9ULI3 1381 aa30.27■■■□□ 2.44
SCN5A-213ENST00000491944 IL16Q14005 1332 aa30.26■■■□□ 2.43
SCN5A-213ENST00000491944 ZNF853P0CG23 659 aa30.26■■■□□ 2.43
SCN5A-213ENST00000491944 MBIPQ9NS73 344 aa30.26■■■□□ 2.43
SCN5A-213ENST00000491944 CICQ96RK0 1608 aaPredicted RBP30.25■■■□□ 2.43
SCN5A-213ENST00000491944 VSIG10Q8N0Z9 540 aa30.25■■■□□ 2.43
SCN5A-213ENST00000491944 LINC00116Q8NCU8 138 aa30.25■■■□□ 2.43
SCN5A-213ENST00000491944 ZNF521Q96K83 1311 aa30.24■■■□□ 2.43
SCN5A-213ENST00000491944 COL5A3P25940 1745 aaPredicted RBP30.24■■■□□ 2.43
SCN5A-213ENST00000491944 EIF4A1P60842 406 aaKnown RBP30.24■■■□□ 2.43
SCN5A-213ENST00000491944 DNAJC10Q8IXB1 793 aa30.24■■■□□ 2.43
SCN5A-213ENST00000491944 C4BP0C0L5 1744 aa30.23■■■□□ 2.43
SCN5A-213ENST00000491944 HMGB2P26583 209 aaKnown RBP30.23■■■□□ 2.43
SCN5A-213ENST00000491944 NBPF14Q5TI25 921 aa30.23■■■□□ 2.43
SCN5A-213ENST00000491944 SNRPA1P09661 255 aaKnown RBP30.21■■■□□ 2.43
SCN5A-213ENST00000491944 ANO8Q9HCE9 1232 aaPredicted RBP30.21■■■□□ 2.43
SCN5A-213ENST00000491944 TSR2Q969E8 191 aaKnown RBP30.2■■■□□ 2.43
SCN5A-213ENST00000491944 STK32BQ9NY57 414 aa30.2■■■□□ 2.43
SCN5A-213ENST00000491944 PRAMEF22A3QJZ6 481 aa30.18■■■□□ 2.42
SCN5A-213ENST00000491944 ZNF827Q17R98 1081 aa30.18■■■□□ 2.42
SCN5A-213ENST00000491944 TEX13AQ9BXU3 409 aaPredicted RBP30.18■■■□□ 2.42
SCN5A-213ENST00000491944 GOLGA2Q08379 1002 aa30.17■■■□□ 2.42
SCN5A-213ENST00000491944 AK7Q96M32 723 aa30.17■■■□□ 2.42
SCN5A-213ENST00000491944 SPINK5Q9NQ38 1064 aaPredicted RBP30.17■■■□□ 2.42
SCN5A-213ENST00000491944 LAMB4A4D0S4 1761 aa30.17■■■□□ 2.42
SCN5A-213ENST00000491944 GIGYF1O75420 1035 aaPredicted RBP30.16■■■□□ 2.42
SCN5A-213ENST00000491944 STARD3NLO95772 234 aa30.16■■■□□ 2.42
SCN5A-213ENST00000491944 CYP19A1P11511 503 aaPredicted RBP30.15■■■□□ 2.42
SCN5A-213ENST00000491944 CRKLP46109 303 aaKnown RBP30.15■■■□□ 2.42
SCN5A-213ENST00000491944 KRT24Q2M2I5 525 aa30.15■■■□□ 2.42
SCN5A-213ENST00000491944 AKT1S1Q96B36 256 aa30.15■■■□□ 2.42
SCN5A-213ENST00000491944 MYH16Q9H6N6 1097 aa30.15■■■□□ 2.42
SCN5A-213ENST00000491944 FANCIQ9NVI1 1328 aa30.15■■■□□ 2.42
SCN5A-213ENST00000491944 MYH14Q7Z406 1995 aaKnown RBP30.15■■■□□ 2.42
SCN5A-213ENST00000491944 SLC15A2Q16348 729 aa30.15■■■□□ 2.42
SCN5A-213ENST00000491944 TUBGCP6Q96RT7 1819 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms