RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 NFATC2IPQ8NCF5 419 aa14.12□□□□□ -0.15
CACNA1C-227ENST00000491104 PIGBQ92521 554 aa14.12□□□□□ -0.15
CACNA1C-227ENST00000491104 KDM3BQ7LBC6 1761 aa14.11□□□□□ -0.15
CACNA1C-227ENST00000491104 YTHDC1Q96MU7 727 aaKnown RBP14.11□□□□□ -0.15
CACNA1C-227ENST00000491104 MIS18AQ9NYP9 233 aa14.11□□□□□ -0.15
CACNA1C-227ENST00000491104 SLC39A6Q13433 755 aa14.1□□□□□ -0.15
CACNA1C-227ENST00000491104 CCDC27Q2M243 656 aa14.1□□□□□ -0.15
CACNA1C-227ENST00000491104 BCL11BQ9C0K0 894 aaPredicted RBP14.1□□□□□ -0.15
CACNA1C-227ENST00000491104 LAS1LQ9Y4W2 734 aaKnown RBP14.1□□□□□ -0.15
CACNA1C-227ENST00000491104 UBR2Q8IWV8 1755 aa14.09□□□□□ -0.15
CACNA1C-227ENST00000491104 KCNQ3O43525 872 aa14.09□□□□□ -0.15
CACNA1C-227ENST00000491104 ASAP1Q9ULH1 1129 aa14.09□□□□□ -0.15
CACNA1C-227ENST00000491104 LY75O60449 1722 aa14.08□□□□□ -0.16
CACNA1C-227ENST00000491104 BTBD11A6QL63 1104 aa14.08□□□□□ -0.16
CACNA1C-227ENST00000491104 ZNF521Q96K83 1311 aa14.08□□□□□ -0.16
CACNA1C-227ENST00000491104 TAF7Q15545 349 aaPredicted RBP14.07□□□□□ -0.16
CACNA1C-227ENST00000491104 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
CACNA1C-227ENST00000491104 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
CACNA1C-227ENST00000491104 ATG3Q9NT62 314 aa14.07□□□□□ -0.16
CACNA1C-227ENST00000491104 PALLDQ8WX93 1383 aa14.07□□□□□ -0.16
CACNA1C-227ENST00000491104 KCPQ6ZWJ8 1503 aa14.06□□□□□ -0.16
CACNA1C-227ENST00000491104 APBA3O96018 575 aa14.06□□□□□ -0.16
CACNA1C-227ENST00000491104 UPF1Q92900 1129 aaKnown RBP eCLIP14.06□□□□□ -0.16
CACNA1C-227ENST00000491104 TSPYL4Q9UJ04 414 aa14.06□□□□□ -0.16
CACNA1C-227ENST00000491104 C5P01031 1676 aa14.05□□□□□ -0.16
CACNA1C-227ENST00000491104 DEFB132Q7Z7B7 95 aa14.05□□□□□ -0.16
CACNA1C-227ENST00000491104 WDR63Q8IWG1 891 aa14.05□□□□□ -0.16
CACNA1C-227ENST00000491104 NGEFQ8N5V2 710 aa14.05□□□□□ -0.16
CACNA1C-227ENST00000491104 TSR2Q969E8 191 aaKnown RBP14.05□□□□□ -0.16
CACNA1C-227ENST00000491104 CDCA7LQ96GN5 454 aa14.05□□□□□ -0.16
CACNA1C-227ENST00000491104 MBIPQ9NS73 344 aa14.05□□□□□ -0.16
CACNA1C-227ENST00000491104 EP400Q96L91 3159 aa14.05□□□□□ -0.16
CACNA1C-227ENST00000491104 TJP1Q07157 1748 aa14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 CHL1O00533 1208 aa14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 ZNF853P0CG23 659 aa14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 KCNQ4P56696 695 aa14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 CALD1Q05682 793 aaKnown RBP14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 SF3B2Q13435 895 aaKnown RBP14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 ZNF790Q6PG37 636 aa14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 CFAP44Q96MT7 982 aa14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 IFT57Q9NWB7 429 aa14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 ZBED9Q6R2W3 1325 aa14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 RGPD3A6NKT7 1758 aaPredicted RBP14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 RGPD4Q7Z3J3 1758 aa14.04□□□□□ -0.16
CACNA1C-227ENST00000491104 PTCD1O75127 700 aaKnown RBP14.03□□□□□ -0.16
CACNA1C-227ENST00000491104 GNAI1P63096 354 aa14.03□□□□□ -0.16
CACNA1C-227ENST00000491104 EN1Q05925 392 aaPredicted RBP14.03□□□□□ -0.16
CACNA1C-227ENST00000491104 TTC5Q8N0Z6 440 aa14.03□□□□□ -0.16
CACNA1C-227ENST00000491104 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
CACNA1C-227ENST00000491104 TAF1LQ8IZX4 1826 aa14.02□□□□□ -0.16
CACNA1C-227ENST00000491104 RREB1Q92766 1687 aa14.02□□□□□ -0.16
CACNA1C-227ENST00000491104 IL16Q14005 1332 aa14.02□□□□□ -0.17
CACNA1C-227ENST00000491104 FANCIQ9NVI1 1328 aa14.02□□□□□ -0.17
CACNA1C-227ENST00000491104 GOLGA2Q08379 1002 aa14.02□□□□□ -0.17
CACNA1C-227ENST00000491104 KRT24Q2M2I5 525 aa14.02□□□□□ -0.17
CACNA1C-227ENST00000491104 SMARCC1Q92922 1105 aaPredicted RBP14.02□□□□□ -0.17
CACNA1C-227ENST00000491104 ZNF496Q96IT1 587 aaPredicted RBP14.02□□□□□ -0.17
CACNA1C-227ENST00000491104 SLC4A9Q96Q91 983 aa14.02□□□□□ -0.17
CACNA1C-227ENST00000491104 PRAMEF22A3QJZ6 481 aa14.01□□□□□ -0.17
CACNA1C-227ENST00000491104 BAG6P46379 1132 aa14.01□□□□□ -0.17
CACNA1C-227ENST00000491104 EIF4A1P60842 406 aaKnown RBP14.01□□□□□ -0.17
CACNA1C-227ENST00000491104 EZH2Q15910 746 aaKnown RBP14.01□□□□□ -0.17
CACNA1C-227ENST00000491104 LAMB4A4D0S4 1761 aa14.01□□□□□ -0.17
CACNA1C-227ENST00000491104 NUP188Q5SRE5 1749 aa14.01□□□□□ -0.17
CACNA1C-227ENST00000491104 HEG1Q9ULI3 1381 aa14□□□□□ -0.17
CACNA1C-227ENST00000491104 LOC102724428A0A0B4J2F2 783 aa14□□□□□ -0.17
CACNA1C-227ENST00000491104 SIK1P57059 783 aa14□□□□□ -0.17
CACNA1C-227ENST00000491104 TXNRD1Q16881 649 aa14□□□□□ -0.17
CACNA1C-227ENST00000491104 BABAM1Q9NWV8 329 aa14□□□□□ -0.17
CACNA1C-227ENST00000491104 COL5A3P25940 1745 aaPredicted RBP14□□□□□ -0.17
CACNA1C-227ENST00000491104 ZNF831Q5JPB2 1677 aa13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 PLSCR1O15162 318 aa13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 ATP6V1AP38606 617 aa13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 SLFN5Q08AF3 891 aa13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 ITPK1Q13572 414 aa13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 CCDC125Q86Z20 511 aa13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 PROM2Q8N271 834 aa13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 FMNL2Q96PY5 1086 aa13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 CAMKK2Q96RR4 588 aa13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 LRRC4BQ9NT99 713 aa13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 CCNL1Q9UK58 526 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 CICQ96RK0 1608 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-227ENST00000491104 DNAJC10Q8IXB1 793 aa13.98□□□□□ -0.17
CACNA1C-227ENST00000491104 E9PSI1 815 aa13.97□□□□□ -0.17
CACNA1C-227ENST00000491104 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
CACNA1C-227ENST00000491104 EXOSC9Q06265 439 aaKnown RBP13.97□□□□□ -0.17
CACNA1C-227ENST00000491104 TSPYL6Q8N831 410 aa13.97□□□□□ -0.17
CACNA1C-227ENST00000491104 C8orf58Q8NAV2 365 aa13.97□□□□□ -0.17
CACNA1C-227ENST00000491104 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
CACNA1C-227ENST00000491104 MYH16Q9H6N6 1097 aa13.97□□□□□ -0.17
CACNA1C-227ENST00000491104 MYH14Q7Z406 1995 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-227ENST00000491104 C4BP0C0L5 1744 aa13.96□□□□□ -0.17
CACNA1C-227ENST00000491104 GIGYF1O75420 1035 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-227ENST00000491104 DUSP27Q5VZP5 1158 aa13.96□□□□□ -0.17
CACNA1C-227ENST00000491104 TUBGCP6Q96RT7 1819 aa13.95□□□□□ -0.18
CACNA1C-227ENST00000491104 SNRPA1P09661 255 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-227ENST00000491104 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-227ENST00000491104 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
CACNA1C-227ENST00000491104 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
CACNA1C-227ENST00000491104 SLC27A3Q5K4L6 730 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms