RNA–Protein interactions for RNA: ENST00000490921.5

PARP1-207, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 3,165 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-207ENST00000490921 TAF7LQ5H9L4 462 aa11.13□□□□□ -0.63
PARP1-207ENST00000490921 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
PARP1-207ENST00000490921 TSPYL6Q8N831 410 aa11.13□□□□□ -0.63
PARP1-207ENST00000490921 ST18O60284 1047 aa11.12□□□□□ -0.63
PARP1-207ENST00000490921 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
PARP1-207ENST00000490921 CHAMP1Q96JM3 812 aa11.12□□□□□ -0.63
PARP1-207ENST00000490921 FCHSD2O94868 740 aa11.12□□□□□ -0.63
PARP1-207ENST00000490921 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
PARP1-207ENST00000490921 DCTPP1Q9H773 170 aa11.12□□□□□ -0.63
PARP1-207ENST00000490921 KIF24Q5T7B8 1368 aa11.12□□□□□ -0.63
PARP1-207ENST00000490921 KIF1AQ12756 1690 aa11.12□□□□□ -0.63
PARP1-207ENST00000490921 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
PARP1-207ENST00000490921 MBD3O95983 291 aa11.1□□□□□ -0.63
PARP1-207ENST00000490921 ARID3AQ99856 593 aa11.1□□□□□ -0.63
PARP1-207ENST00000490921 RNF214Q8ND24 703 aa11.1□□□□□ -0.63
PARP1-207ENST00000490921 CCDC94Q9BW85 323 aaPredicted RBP11.1□□□□□ -0.63
PARP1-207ENST00000490921 SDSP20132 328 aa11.1□□□□□ -0.63
PARP1-207ENST00000490921 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
PARP1-207ENST00000490921 KIAA2012Q0VF49 1180 aa11.1□□□□□ -0.63
PARP1-207ENST00000490921 MYRIPQ8NFW9 859 aa11.1□□□□□ -0.63
PARP1-207ENST00000490921 LMTK3Q96Q04 1460 aa11.09□□□□□ -0.63
PARP1-207ENST00000490921 OTUD7AQ8TE49 926 aaPredicted RBP11.09□□□□□ -0.63
PARP1-207ENST00000490921 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
PARP1-207ENST00000490921 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.09□□□□□ -0.638e-7■□□□□ 9.2
PARP1-207ENST00000490921 PHRF1Q9P1Y6 1649 aaKnown RBP11.09□□□□□ -0.63
PARP1-207ENST00000490921 TTC21BQ7Z4L5 1316 aa11.09□□□□□ -0.63
PARP1-207ENST00000490921 ZNF853P0CG23 659 aa11.08□□□□□ -0.64
PARP1-207ENST00000490921 API5Q9BZZ5 524 aaKnown RBP11.08□□□□□ -0.64
PARP1-207ENST00000490921 IFT57Q9NWB7 429 aa11.08□□□□□ -0.64
PARP1-207ENST00000490921 ATP10DQ9P241 1426 aa11.08□□□□□ -0.64
PARP1-207ENST00000490921 ELL2O00472 640 aaPredicted RBP11.08□□□□□ -0.64
PARP1-207ENST00000490921 NFE2L2Q16236 605 aa11.08□□□□□ -0.64
PARP1-207ENST00000490921 MBIPQ9NS73 344 aa11.08□□□□□ -0.64
PARP1-207ENST00000490921 ACEP12821 1306 aa11.08□□□□□ -0.64
PARP1-207ENST00000490921 GNAI1P63096 354 aa11.08□□□□□ -0.64
PARP1-207ENST00000490921 UTP14CQ5TAP6 766 aaKnown RBP11.08□□□□□ -0.64
PARP1-207ENST00000490921 PHACTR3Q96KR7 559 aa11.08□□□□□ -0.64
PARP1-207ENST00000490921 TSPY26PQ9H489 355 aa11.08□□□□□ -0.64
PARP1-207ENST00000490921 PRDM10Q9NQV6 1147 aa11.08□□□□□ -0.64
PARP1-207ENST00000490921 MARF1Q9Y4F3 1742 aaKnown RBP11.07□□□□□ -0.64
PARP1-207ENST00000490921 REC8O95072 547 aa11.07□□□□□ -0.64
PARP1-207ENST00000490921 BRD1O95696 1058 aa11.07□□□□□ -0.64
PARP1-207ENST00000490921 TWISTNBQ3B726 338 aaPredicted RBP11.07□□□□□ -0.64
PARP1-207ENST00000490921 CASC1Q6TDU7 716 aa11.07□□□□□ -0.64
PARP1-207ENST00000490921 PTMAP06454 111 aaKnown RBP11.07□□□□□ -0.64
PARP1-207ENST00000490921 DMTNQ08495 405 aa11.07□□□□□ -0.64
PARP1-207ENST00000490921 PIK3C2AO00443 1686 aa11.07□□□□□ -0.64
PARP1-207ENST00000490921 ZSCAN20P17040 1043 aaPredicted RBP11.06□□□□□ -0.64
PARP1-207ENST00000490921 GTF2F1P35269 517 aaKnown RBP eCLIP11.06□□□□□ -0.64
PARP1-207ENST00000490921 FOXD4L5Q5VV16 416 aaPredicted RBP11.06□□□□□ -0.64
PARP1-207ENST00000490921 ANKRD44Q8N8A2 993 aa11.06□□□□□ -0.64
PARP1-207ENST00000490921 FOXD4L4Q8WXT5 416 aaPredicted RBP11.06□□□□□ -0.64
PARP1-207ENST00000490921 PRIMPOLQ96LW4 560 aa11.06□□□□□ -0.64
PARP1-207ENST00000490921 ZNF710Q8N1W2 664 aa11.06□□□□□ -0.64
PARP1-207ENST00000490921 TMX3Q96JJ7 454 aa11.06□□□□□ -0.64
PARP1-207ENST00000490921 STRCQ7RTU9 1775 aa11.06□□□□□ -0.64
PARP1-207ENST00000490921 RGPD1P0DJD0 1748 aa11.06□□□□□ -0.64
PARP1-207ENST00000490921 C8orf58Q8NAV2 365 aa11.06□□□□□ -0.64
PARP1-207ENST00000490921 PIBF1Q8WXW3 757 aa11.06□□□□□ -0.64
PARP1-207ENST00000490921 JARID2Q92833 1246 aaPredicted RBP11.06□□□□□ -0.64
PARP1-207ENST00000490921 RGPD8O14715 1765 aaPredicted RBP11.05□□□□□ -0.64
PARP1-207ENST00000490921 ERC2O15083 957 aa11.05□□□□□ -0.64
PARP1-207ENST00000490921 COG3Q96JB2 828 aa11.05□□□□□ -0.64
PARP1-207ENST00000490921 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
PARP1-207ENST00000490921 CUL4AQ13619 759 aa11.05□□□□□ -0.64
PARP1-207ENST00000490921 HMGN5P82970 282 aaKnown RBP11.04□□□□□ -0.64
PARP1-207ENST00000490921 POLKQ9UBT6 870 aa11.04□□□□□ -0.64
PARP1-207ENST00000490921 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
PARP1-207ENST00000490921 MAP2P11137 1827 aaKnown RBP11.04□□□□□ -0.64
PARP1-207ENST00000490921 SMARCA5O60264 1052 aaPredicted RBP11.04□□□□□ -0.64
PARP1-207ENST00000490921 CEP85Q6P2H3 762 aa11.04□□□□□ -0.64
PARP1-207ENST00000490921 RPAP2Q8IXW5 612 aaPredicted RBP11.04□□□□□ -0.64
PARP1-207ENST00000490921 SYAP1Q96A49 352 aaPredicted RBP11.04□□□□□ -0.64
PARP1-207ENST00000490921 STRCP1A6NGW2 1772 aa11.04□□□□□ -0.64
PARP1-207ENST00000490921 NCKAP5LQ9HCH0 1330 aa11.04□□□□□ -0.64
PARP1-207ENST00000490921 TRPM3Q9HCF6 1732 aaPredicted RBP11.04□□□□□ -0.64
PARP1-207ENST00000490921 HMOX1P09601 288 aa11.04□□□□□ -0.64
PARP1-207ENST00000490921 NEK4P51957 841 aa11.04□□□□□ -0.64
PARP1-207ENST00000490921 NOLC1Q14978 699 aaKnown RBP eCLIP11.04□□□□□ -0.641e-48■■■□□ 16.3
PARP1-207ENST00000490921 DNTTIP2Q5QJE6 756 aaKnown RBP11.04□□□□□ -0.64
PARP1-207ENST00000490921 TSC1Q92574 1164 aa11.04□□□□□ -0.64
PARP1-207ENST00000490921 RGS12O14924 1447 aa11.03□□□□□ -0.64
PARP1-207ENST00000490921 RTL1A6NKG5 1358 aa11.03□□□□□ -0.64
PARP1-207ENST00000490921 MCM2P49736 904 aa11.03□□□□□ -0.64
PARP1-207ENST00000490921 UVSSAQ2YD98 709 aa11.03□□□□□ -0.64
PARP1-207ENST00000490921 FAM184AQ8NB25 1140 aa11.03□□□□□ -0.64
PARP1-207ENST00000490921 SLIT3O75094 1523 aa11.03□□□□□ -0.64
PARP1-207ENST00000490921 PHF14O94880 888 aa11.02□□□□□ -0.64
PARP1-207ENST00000490921 INTS4Q96HW7 963 aaKnown RBP11.02□□□□□ -0.64
PARP1-207ENST00000490921 ZNF830Q96NB3 372 aaPredicted RBP11.02□□□□□ -0.64
PARP1-207ENST00000490921 NAP1L2Q9ULW6 460 aaPredicted RBP11.02□□□□□ -0.64
PARP1-207ENST00000490921 ABCC6O95255 1503 aa11.02□□□□□ -0.64
PARP1-207ENST00000490921 FBLN1P23142 703 aa11.02□□□□□ -0.65
PARP1-207ENST00000490921 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.65
PARP1-207ENST00000490921 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
PARP1-207ENST00000490921 GADD45BO75293 160 aaPredicted RBP11.02□□□□□ -0.65
PARP1-207ENST00000490921 OSBPL3Q9H4L5 887 aa11.02□□□□□ -0.65
PARP1-207ENST00000490921 SPTLC3Q9NUV7 552 aa11.02□□□□□ -0.65
PARP1-207ENST00000490921 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
PARP1-207ENST00000490921 FKBP5Q13451 457 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms