RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 DNAJC2Q99543 621 aaKnown RBP12.35□□□□□ -0.43
BRD9-209ENST00000490814 INTS3Q68E01 1043 aaKnown RBP12.34□□□□□ -0.43
BRD9-209ENST00000490814 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
BRD9-209ENST00000490814 PREX1Q8TCU6 1659 aa12.34□□□□□ -0.43
BRD9-209ENST00000490814 LMTK2Q8IWU2 1503 aa12.34□□□□□ -0.43
BRD9-209ENST00000490814 ST18O60284 1047 aa12.34□□□□□ -0.43
BRD9-209ENST00000490814 RABEP1Q15276 862 aa12.34□□□□□ -0.43
BRD9-209ENST00000490814 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
BRD9-209ENST00000490814 ZGPATQ8N5A5 531 aaKnown RBP12.33□□□□□ -0.44
BRD9-209ENST00000490814 YTHDC2Q9H6S0 1430 aaKnown RBP12.33□□□□□ -0.44
BRD9-209ENST00000490814 TMEM94Q12767 1356 aa12.33□□□□□ -0.44
BRD9-209ENST00000490814 CEP170BQ9Y4F5 1589 aaPredicted RBP12.33□□□□□ -0.44
BRD9-209ENST00000490814 NUCB2P80303 420 aa12.33□□□□□ -0.44
BRD9-209ENST00000490814 PSME1Q06323 249 aa12.33□□□□□ -0.44
BRD9-209ENST00000490814 SYCE3A1L190 88 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 TTC22Q5TAA0 569 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 ARHGAP45Q92619 1136 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 NOL7Q9UMY1 257 aaKnown RBP12.32□□□□□ -0.44
BRD9-209ENST00000490814 HDAC5Q9UQL6 1122 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 NUTM2BA6NNL0 878 aaPredicted RBP12.32□□□□□ -0.44
BRD9-209ENST00000490814 NUTM2EB1AL46 878 aaPredicted RBP12.32□□□□□ -0.44
BRD9-209ENST00000490814 F6X3S4 739 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 APPP05067 770 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 SDSP20132 328 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 NUTM2AQ8IVF1 878 aaPredicted RBP12.32□□□□□ -0.44
BRD9-209ENST00000490814 MEIS3Q99687 375 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 KCNG1Q9UIX4 513 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 TRIM6-TRIM34B2RNG4 842 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
BRD9-209ENST00000490814 CSPP1Q1MSJ5 1256 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 SASS6Q6UVJ0 657 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 MYO3AQ8NEV4 1616 aa12.32□□□□□ -0.44
BRD9-209ENST00000490814 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
BRD9-209ENST00000490814 KCNJ4P48050 445 aa12.31□□□□□ -0.44
BRD9-209ENST00000490814 ZNF771Q7L3S4 317 aaPredicted RBP12.31□□□□□ -0.44
BRD9-209ENST00000490814 RILPL2Q969X0 211 aa12.31□□□□□ -0.44
BRD9-209ENST00000490814 NCOA3Q9Y6Q9 1424 aa12.31□□□□□ -0.44
BRD9-209ENST00000490814 IL13P35225 146 aa12.31□□□□□ -0.44
BRD9-209ENST00000490814 NEK4P51957 841 aa12.31□□□□□ -0.44
BRD9-209ENST00000490814 ZKSCAN5Q9Y2L8 839 aa12.31□□□□□ -0.44
BRD9-209ENST00000490814 ROBO2Q9HCK4 1378 aa12.31□□□□□ -0.44
BRD9-209ENST00000490814 SPATA31D1Q6ZQQ2 1576 aa12.31□□□□□ -0.44
BRD9-209ENST00000490814 AK9Q5TCS8 1911 aa12.3□□□□□ -0.44
BRD9-209ENST00000490814 EXOC6BQ9Y2D4 811 aa12.3□□□□□ -0.44
BRD9-209ENST00000490814 ABCC4O15439 1325 aa12.3□□□□□ -0.44
BRD9-209ENST00000490814 ZNF445P59923 1031 aa12.3□□□□□ -0.44
BRD9-209ENST00000490814 SLC20A2Q08357 652 aa12.3□□□□□ -0.44
BRD9-209ENST00000490814 DCTPP1Q9H773 170 aa12.3□□□□□ -0.44
BRD9-209ENST00000490814 LMBRD1Q9NUN5 540 aa12.3□□□□□ -0.44
BRD9-209ENST00000490814 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
BRD9-209ENST00000490814 CLGNO14967 610 aa12.3□□□□□ -0.44
BRD9-209ENST00000490814 NUDT16Q96DE0 195 aaKnown RBP12.3□□□□□ -0.44
BRD9-209ENST00000490814 CCDC39Q9UFE4 941 aa12.3□□□□□ -0.44
BRD9-209ENST00000490814 REC8O95072 547 aa12.29□□□□□ -0.44
BRD9-209ENST00000490814 TSC1Q92574 1164 aa12.29□□□□□ -0.44
BRD9-209ENST00000490814 USP26Q9BXU7 913 aa12.29□□□□□ -0.44
BRD9-209ENST00000490814 LRRC7Q96NW7 1537 aa12.29□□□□□ -0.44
BRD9-209ENST00000490814 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
BRD9-209ENST00000490814 IGSF3O75054 1194 aa12.29□□□□□ -0.44
BRD9-209ENST00000490814 PLCB2Q00722 1185 aa12.29□□□□□ -0.44
BRD9-209ENST00000490814 C19orf44Q9H6X5 657 aa12.29□□□□□ -0.44
BRD9-209ENST00000490814 ZNF500O60304 480 aaPredicted RBP12.28□□□□□ -0.44
BRD9-209ENST00000490814 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
BRD9-209ENST00000490814 ANO2Q9NQ90 1003 aa12.28□□□□□ -0.44
BRD9-209ENST00000490814 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
BRD9-209ENST00000490814 PPLO60437 1756 aa12.28□□□□□ -0.44
BRD9-209ENST00000490814 IFT172Q9UG01 1749 aa12.28□□□□□ -0.44
BRD9-209ENST00000490814 HMMRO75330 724 aa12.28□□□□□ -0.44
BRD9-209ENST00000490814 HS1BP3Q53T59 392 aa12.28□□□□□ -0.44
BRD9-209ENST00000490814 JARID2Q92833 1246 aaPredicted RBP12.28□□□□□ -0.44
BRD9-209ENST00000490814 WASLO00401 505 aaPredicted RBP12.27□□□□□ -0.44
BRD9-209ENST00000490814 CEP85Q6P2H3 762 aa12.27□□□□□ -0.44
BRD9-209ENST00000490814 ANKRD44Q8N8A2 993 aa12.27□□□□□ -0.44
BRD9-209ENST00000490814 NEURL4Q96JN8 1562 aa12.27□□□□□ -0.44
BRD9-209ENST00000490814 FAM135BQ49AJ0 1406 aa12.27□□□□□ -0.45
BRD9-209ENST00000490814 ATP2B3Q16720 1220 aa12.27□□□□□ -0.45
BRD9-209ENST00000490814 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.27□□□□□ -0.45
BRD9-209ENST00000490814 SLAIN2Q9P270 581 aa12.27□□□□□ -0.45
BRD9-209ENST00000490814 ZFYVE9O95405 1425 aa12.27□□□□□ -0.45
BRD9-209ENST00000490814 FAM177BA6PVY3 158 aa12.27□□□□□ -0.45
BRD9-209ENST00000490814 ERC2O15083 957 aa12.27□□□□□ -0.45
BRD9-209ENST00000490814 CABLES1Q8TDN4 633 aa12.27□□□□□ -0.45
BRD9-209ENST00000490814 TSPYL4Q9UJ04 414 aa12.27□□□□□ -0.45
BRD9-209ENST00000490814 PNPLA6Q8IY17 1366 aa12.27□□□□□ -0.45
BRD9-209ENST00000490814 TOM1O60784 492 aa12.26□□□□□ -0.45
BRD9-209ENST00000490814 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
BRD9-209ENST00000490814 MMP14P50281 582 aa12.26□□□□□ -0.45
BRD9-209ENST00000490814 GPT2Q8TD30 523 aa12.26□□□□□ -0.45
BRD9-209ENST00000490814 UPF3BQ9BZI7 483 aaKnown RBP12.26□□□□□ -0.45
BRD9-209ENST00000490814 ZC3H13Q5T200 1668 aaKnown RBP12.26□□□□□ -0.45
BRD9-209ENST00000490814 MYO5BQ9ULV0 1848 aa12.26□□□□□ -0.45
BRD9-209ENST00000490814 MSH6P52701 1360 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
BRD9-209ENST00000490814 ZNF853P0CG23 659 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 HSP90AB2PQ58FF8 381 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 TMEM63CQ9P1W3 806 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 NEXMIFQ5QGS0 1516 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 ADAMTS13Q76LX8 1427 aa12.25□□□□□ -0.45
BRD9-209ENST00000490814 BRPF1P55201 1214 aaPredicted RBP12.25□□□□□ -0.45
BRD9-209ENST00000490814 FKBP5Q13451 457 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms