RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 CLIP2Q9UDT6 1046 aa15.23■□□□□ 0.03
SHOX2-205ENST00000490689 ZSCAN22P10073 491 aaPredicted RBP15.23■□□□□ 0.03
SHOX2-205ENST00000490689 SKIDA1Q1XH10 827 aa15.23■□□□□ 0.03
SHOX2-205ENST00000490689 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
SHOX2-205ENST00000490689 ARGLU1Q9NWB6 273 aaPredicted RBP15.23■□□□□ 0.03
SHOX2-205ENST00000490689 RAB11FIP3O75154 756 aa15.22■□□□□ 0.03
SHOX2-205ENST00000490689 NEUROD6Q96NK8 337 aa15.22■□□□□ 0.03
SHOX2-205ENST00000490689 CHMP4AQ9BY43 222 aa15.22■□□□□ 0.03
SHOX2-205ENST00000490689 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
SHOX2-205ENST00000490689 PTGS1P23219 599 aa15.22■□□□□ 0.03
SHOX2-205ENST00000490689 U2AF2P26368 475 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHOX2-205ENST00000490689 AACSQ86V21 672 aa15.22■□□□□ 0.03
SHOX2-205ENST00000490689 KIAA0556O60303 1618 aa15.22■□□□□ 0.03
SHOX2-205ENST00000490689 STK11IPQ8N1F8 1099 aa15.22■□□□□ 0.03
SHOX2-205ENST00000490689 UVSSAQ2YD98 709 aa15.21■□□□□ 0.03
SHOX2-205ENST00000490689 TULP1O00294 542 aaPredicted RBP15.21■□□□□ 0.03
SHOX2-205ENST00000490689 PES1O00541 588 aaKnown RBP15.21■□□□□ 0.03
SHOX2-205ENST00000490689 ZNF165P49910 485 aa15.21■□□□□ 0.03
SHOX2-205ENST00000490689 ANKRD36BQ8N2N9 1353 aa15.21■□□□□ 0.03
SHOX2-205ENST00000490689 RTEL1-TNFRSF6BF6WH68 1400 aa15.21■□□□□ 0.03
SHOX2-205ENST00000490689 GOLGA6L1Q8N7Z2 621 aa15.21■□□□□ 0.03
SHOX2-205ENST00000490689 NSFL1CQ9UNZ2 370 aaKnown RBP15.21■□□□□ 0.03
SHOX2-205ENST00000490689 TTLL5Q6EMB2 1281 aa15.21■□□□□ 0.02
SHOX2-205ENST00000490689 ZNF500O60304 480 aaPredicted RBP15.2■□□□□ 0.02
SHOX2-205ENST00000490689 SMAP1Q8IYB5 467 aaPredicted RBP15.2■□□□□ 0.02
SHOX2-205ENST00000490689 NAT10Q9H0A0 1025 aaKnown RBP15.2■□□□□ 0.02
SHOX2-205ENST00000490689 RPGRIP1LQ68CZ1 1315 aa15.2■□□□□ 0.02
SHOX2-205ENST00000490689 FAM173BQ6P4H8 233 aa15.2■□□□□ 0.02
SHOX2-205ENST00000490689 JARID2Q92833 1246 aaPredicted RBP15.2■□□□□ 0.02
SHOX2-205ENST00000490689 ABCA5Q8WWZ7 1642 aa15.2■□□□□ 0.02
SHOX2-205ENST00000490689 NEXNQ0ZGT2 675 aa15.2■□□□□ 0.02
SHOX2-205ENST00000490689 GPS2Q13227 327 aa15.2■□□□□ 0.02
SHOX2-205ENST00000490689 SYNE3Q6ZMZ3 975 aa15.2■□□□□ 0.02
SHOX2-205ENST00000490689 ZBTB9Q96C00 473 aa15.2■□□□□ 0.02
SHOX2-205ENST00000490689 GUCY1B3Q02153 619 aa15.19■□□□□ 0.02
SHOX2-205ENST00000490689 FLIIQ13045 1269 aa15.19■□□□□ 0.02
SHOX2-205ENST00000490689 NUDT16Q96DE0 195 aaKnown RBP15.19■□□□□ 0.02
SHOX2-205ENST00000490689 TRAPPC8Q9Y2L5 1435 aa15.19■□□□□ 0.02
SHOX2-205ENST00000490689 MYRIPQ8NFW9 859 aa15.19■□□□□ 0.02
SHOX2-205ENST00000490689 RIOK3O14730 519 aaKnown RBP15.19■□□□□ 0.02
SHOX2-205ENST00000490689 LUZP1Q86V48 1076 aa15.19■□□□□ 0.02
SHOX2-205ENST00000490689 ZSCAN31Q96LW9 406 aaPredicted RBP15.19■□□□□ 0.02
SHOX2-205ENST00000490689 POLR3GO15318 223 aaPredicted RBP15.18■□□□□ 0.02
SHOX2-205ENST00000490689 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
SHOX2-205ENST00000490689 EIF2AK4Q9P2K8 1649 aaKnown RBP15.18■□□□□ 0.02
SHOX2-205ENST00000490689 NSD2O96028 1365 aa15.18■□□□□ 0.02
SHOX2-205ENST00000490689 CSB-PGBD3P0DP91 1061 aa15.18■□□□□ 0.02
SHOX2-205ENST00000490689 ANO6Q4KMQ2 910 aa15.18■□□□□ 0.02
SHOX2-205ENST00000490689 C1orf141Q5JVX7 400 aa15.18■□□□□ 0.02
SHOX2-205ENST00000490689 BOLA2Q9H3K6 86 aa15.18■□□□□ 0.02
SHOX2-205ENST00000490689 DACT1Q9NYF0 836 aa15.18■□□□□ 0.02
SHOX2-205ENST00000490689 SHANK2Q9UPX8 1470 aa15.18■□□□□ 0.02
SHOX2-205ENST00000490689 TAF7LQ5H9L4 462 aa15.18■□□□□ 0.02
SHOX2-205ENST00000490689 RIC3Q7Z5B4 369 aa15.18■□□□□ 0.02
SHOX2-205ENST00000490689 ANXA1P04083 346 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 SYT1P21579 422 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 BBXQ8WY36 941 aaPredicted RBP15.17■□□□□ 0.02
SHOX2-205ENST00000490689 KIF1BPQ96EK5 621 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 A0A1W2PP64 1363 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 STK38Q15208 465 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
SHOX2-205ENST00000490689 PPP1R42Q7Z4L9 355 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 CCDC61Q9Y6R9 512 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 TERF1P54274 439 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 AK2P54819 239 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 PIBF1Q8WXW3 757 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 CCDC8Q9H0W5 538 aaPredicted RBP15.17■□□□□ 0.02
SHOX2-205ENST00000490689 F13A1P00488 732 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 ATP2B1P20020 1258 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 G2E3Q7L622 706 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 PALD1Q9ULE6 856 aa15.17■□□□□ 0.02
SHOX2-205ENST00000490689 CHMLP26374 656 aa15.16■□□□□ 0.02
SHOX2-205ENST00000490689 FBXO31Q5XUX0 539 aaPredicted RBP15.16■□□□□ 0.02
SHOX2-205ENST00000490689 DNAJC25Q9H1X3 360 aa15.16■□□□□ 0.02
SHOX2-205ENST00000490689 SLC52A1Q9NWF4 448 aa15.16■□□□□ 0.02
SHOX2-205ENST00000490689 APPP05067 770 aa15.16■□□□□ 0.02
SHOX2-205ENST00000490689 KIF18AQ8NI77 898 aa15.16■□□□□ 0.02
SHOX2-205ENST00000490689 SCAND2PQ9GZW5 306 aaPredicted RBP15.16■□□□□ 0.02
SHOX2-205ENST00000490689 PTPRTO14522 1441 aa15.15■□□□□ 0.02
SHOX2-205ENST00000490689 GLRX3O76003 335 aaKnown RBP15.15■□□□□ 0.02
SHOX2-205ENST00000490689 SERPINC1P01008 464 aa15.15■□□□□ 0.02
SHOX2-205ENST00000490689 HSP90AB2PQ58FF8 381 aa15.15■□□□□ 0.02
SHOX2-205ENST00000490689 SIRT2Q8IXJ6 389 aa15.15■□□□□ 0.02
SHOX2-205ENST00000490689 CEP57L1Q8IYX8 460 aa15.15■□□□□ 0.02
SHOX2-205ENST00000490689 ZNF692Q9BU19 519 aaPredicted RBP15.15■□□□□ 0.02
SHOX2-205ENST00000490689 TMX1Q9H3N1 280 aa15.15■□□□□ 0.02
SHOX2-205ENST00000490689 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
SHOX2-205ENST00000490689 PTPRCP08575 1304 aa15.15■□□□□ 0.02
SHOX2-205ENST00000490689 FAM200AQ8TCP9 573 aa15.15■□□□□ 0.02
SHOX2-205ENST00000490689 UBXN4Q92575 508 aa15.15■□□□□ 0.02
SHOX2-205ENST00000490689 CEP135Q66GS9 1140 aa15.14■□□□□ 0.01
SHOX2-205ENST00000490689 PPIP5K1Q6PFW1 1433 aa15.14■□□□□ 0.01
SHOX2-205ENST00000490689 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
SHOX2-205ENST00000490689 BIN1O00499 593 aa15.14■□□□□ 0.01
SHOX2-205ENST00000490689 FOXO3O43524 673 aa15.14■□□□□ 0.01
SHOX2-205ENST00000490689 WASHC4Q2M389 1173 aa15.14■□□□□ 0.01
SHOX2-205ENST00000490689 KIF21AQ7Z4S6 1674 aa15.14■□□□□ 0.01
SHOX2-205ENST00000490689 GTF2F1P35269 517 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHOX2-205ENST00000490689 ANKRD1Q15327 319 aa15.14■□□□□ 0.01
SHOX2-205ENST00000490689 BRD1O95696 1058 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms