RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
SNX12-205ENST00000490561 BTBD11A6QL63 1104 aa17.18■□□□□ 0.34
SNX12-205ENST00000490561 DUSP27Q5VZP5 1158 aa17.18■□□□□ 0.34
SNX12-205ENST00000490561 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
SNX12-205ENST00000490561 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
SNX12-205ENST00000490561 FANCIQ9NVI1 1328 aa17.18■□□□□ 0.34
SNX12-205ENST00000490561 RGS12O14924 1447 aa17.17■□□□□ 0.34
SNX12-205ENST00000490561 CT47B1P0C2W7 299 aaPredicted RBP17.17■□□□□ 0.34
SNX12-205ENST00000490561 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
SNX12-205ENST00000490561 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
SNX12-205ENST00000490561 SIPA1L3O60292 1781 aaPredicted RBP17.17■□□□□ 0.34
SNX12-205ENST00000490561 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
SNX12-205ENST00000490561 FAM196AQ6ZSG2 479 aa17.16■□□□□ 0.34
SNX12-205ENST00000490561 NFATC2IPQ8NCF5 419 aa17.16■□□□□ 0.34
SNX12-205ENST00000490561 SOS1Q07889 1333 aaPredicted RBP17.16■□□□□ 0.34
SNX12-205ENST00000490561 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
SNX12-205ENST00000490561 ILDR2Q71H61 639 aa17.14■□□□□ 0.33
SNX12-205ENST00000490561 TTC5Q8N0Z6 440 aa17.14■□□□□ 0.33
SNX12-205ENST00000490561 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
SNX12-205ENST00000490561 CHMP4AQ9BY43 222 aa17.14■□□□□ 0.33
SNX12-205ENST00000490561 KDM3BQ7LBC6 1761 aa17.13■□□□□ 0.33
SNX12-205ENST00000490561 PRIM1P49642 420 aaKnown RBP17.13■□□□□ 0.33
SNX12-205ENST00000490561 ZNF790Q6PG37 636 aa17.13■□□□□ 0.33
SNX12-205ENST00000490561 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
SNX12-205ENST00000490561 SYTL4Q96C24 671 aaPredicted RBP17.12■□□□□ 0.33
SNX12-205ENST00000490561 NHSQ6T4R5 1651 aa17.12■□□□□ 0.33
SNX12-205ENST00000490561 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
SNX12-205ENST00000490561 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
SNX12-205ENST00000490561 HOXB7P09629 217 aa17.11■□□□□ 0.33
SNX12-205ENST00000490561 PIGBQ92521 554 aa17.11■□□□□ 0.33
SNX12-205ENST00000490561 SMARCC1Q92922 1105 aaPredicted RBP17.11■□□□□ 0.33
SNX12-205ENST00000490561 MIS18AQ9NYP9 233 aa17.11■□□□□ 0.33
SNX12-205ENST00000490561 ITGB4P16144 1822 aa17.11■□□□□ 0.33
SNX12-205ENST00000490561 EXOSC9Q06265 439 aaKnown RBP17.1■□□□□ 0.33
SNX12-205ENST00000490561 ACSBG1Q96GR2 724 aa17.1■□□□□ 0.33
SNX12-205ENST00000490561 FMNL2Q96PY5 1086 aa17.1■□□□□ 0.33
SNX12-205ENST00000490561 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
SNX12-205ENST00000490561 BCL11BQ9C0K0 894 aaPredicted RBP17.09■□□□□ 0.33
SNX12-205ENST00000490561 HEG1Q9ULI3 1381 aa17.07■□□□□ 0.32
SNX12-205ENST00000490561 SLC39A6Q13433 755 aa17.07■□□□□ 0.32
SNX12-205ENST00000490561 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
SNX12-205ENST00000490561 VSIG10Q8N0Z9 540 aa17.07■□□□□ 0.32
SNX12-205ENST00000490561 ATG3Q9NT62 314 aa17.06■□□□□ 0.32
SNX12-205ENST00000490561 UBR2Q8IWV8 1755 aa17.06■□□□□ 0.32
SNX12-205ENST00000490561 KCNQ3O43525 872 aa17.05■□□□□ 0.32
SNX12-205ENST00000490561 SNRPA1P09661 255 aaKnown RBP17.05■□□□□ 0.32
SNX12-205ENST00000490561 HMGB2P26583 209 aaKnown RBP17.05■□□□□ 0.32
SNX12-205ENST00000490561 FAM182BQ5T319 152 aa17.05■□□□□ 0.32
SNX12-205ENST00000490561 C8orf58Q8NAV2 365 aa17.05■□□□□ 0.32
SNX12-205ENST00000490561 TEX13AQ9BXU3 409 aaPredicted RBP17.05■□□□□ 0.32
SNX12-205ENST00000490561 KCPQ6ZWJ8 1503 aa17.05■□□□□ 0.32
SNX12-205ENST00000490561 SBF2Q86WG5 1849 aa17.05■□□□□ 0.32
SNX12-205ENST00000490561 KCNQ2O43526 872 aa17.04■□□□□ 0.32
SNX12-205ENST00000490561 VAMP4O75379 141 aa17.04■□□□□ 0.32
SNX12-205ENST00000490561 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
SNX12-205ENST00000490561 ZNF496Q96IT1 587 aaPredicted RBP17.04■□□□□ 0.32
SNX12-205ENST00000490561 RCAN3Q9UKA8 241 aa17.04■□□□□ 0.32
SNX12-205ENST00000490561 ASAP1Q9ULH1 1129 aa17.04■□□□□ 0.32
SNX12-205ENST00000490561 PALLDQ8WX93 1383 aa17.03■□□□□ 0.32
SNX12-205ENST00000490561 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
SNX12-205ENST00000490561 CCDC30Q5VVM6 783 aa17.02■□□□□ 0.32
SNX12-205ENST00000490561 BTAF1O14981 1849 aa17.02■□□□□ 0.31
SNX12-205ENST00000490561 ELL2O00472 640 aaPredicted RBP17.01■□□□□ 0.31
SNX12-205ENST00000490561 SOCS7O14512 581 aa17.01■□□□□ 0.31
SNX12-205ENST00000490561 PTCD1O75127 700 aaKnown RBP17.01■□□□□ 0.31
SNX12-205ENST00000490561 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
SNX12-205ENST00000490561 TSPYL6Q8N831 410 aa17.01■□□□□ 0.31
SNX12-205ENST00000490561 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
SNX12-205ENST00000490561 KAT6BQ8WYB5 2073 aa17.01■□□□□ 0.31
SNX12-205ENST00000490561 ERBB4Q15303 1308 aa17■□□□□ 0.31
SNX12-205ENST00000490561 CICQ96RK0 1608 aaPredicted RBP17■□□□□ 0.31
SNX12-205ENST00000490561 TRIM37O94972 964 aa17■□□□□ 0.31
SNX12-205ENST00000490561 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
SNX12-205ENST00000490561 KRT24Q2M2I5 525 aa17■□□□□ 0.31
SNX12-205ENST00000490561 STK31Q9BXU1 1019 aa17■□□□□ 0.31
SNX12-205ENST00000490561 ZNF831Q5JPB2 1677 aa17■□□□□ 0.31
SNX12-205ENST00000490561 LOC102724428A0A0B4J2F2 783 aa16.99■□□□□ 0.31
SNX12-205ENST00000490561 STARD3NLO95772 234 aa16.99■□□□□ 0.31
SNX12-205ENST00000490561 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
SNX12-205ENST00000490561 SIK1P57059 783 aa16.99■□□□□ 0.31
SNX12-205ENST00000490561 LAMB4A4D0S4 1761 aa16.99■□□□□ 0.31
SNX12-205ENST00000490561 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.98■□□□□ 0.31
SNX12-205ENST00000490561 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
SNX12-205ENST00000490561 KIF16BQ96L93 1317 aa16.97■□□□□ 0.31
SNX12-205ENST00000490561 ATP6V1AP38606 617 aa16.97■□□□□ 0.31
SNX12-205ENST00000490561 PLSCR1O15162 318 aa16.96■□□□□ 0.31
SNX12-205ENST00000490561 EIF2S2P20042 333 aaKnown RBP16.96■□□□□ 0.31
SNX12-205ENST00000490561 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.31
SNX12-205ENST00000490561 SSH1Q8WYL5 1049 aa16.96■□□□□ 0.31
SNX12-205ENST00000490561 DBF4Q9UBU7 674 aaPredicted RBP16.96■□□□□ 0.31
SNX12-205ENST00000490561 C5P01031 1676 aa16.95■□□□□ 0.3
SNX12-205ENST00000490561 SF3B2Q13435 895 aaKnown RBP16.95■□□□□ 0.3
SNX12-205ENST00000490561 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
SNX12-205ENST00000490561 CCDC125Q86Z20 511 aa16.95■□□□□ 0.3
SNX12-205ENST00000490561 LY75O60449 1722 aa16.95■□□□□ 0.3
SNX12-205ENST00000490561 IPO8O15397 1037 aaKnown RBP16.94■□□□□ 0.3
SNX12-205ENST00000490561 APBA3O96018 575 aa16.94■□□□□ 0.3
SNX12-205ENST00000490561 DNAJC10Q8IXB1 793 aa16.94■□□□□ 0.3
SNX12-205ENST00000490561 MRPL50Q8N5N7 158 aaKnown RBP16.94■□□□□ 0.3
SNX12-205ENST00000490561 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms