RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 SOCS7O14512 581 aa22.03■■□□□ 1.12
SFXN5-220ENST00000490056 TEFQ10587 303 aa22.02■■□□□ 1.12
SFXN5-220ENST00000490056 EN1Q05925 392 aaPredicted RBP22.01■■□□□ 1.11
SFXN5-220ENST00000490056 ASAP1Q9ULH1 1129 aa22.01■■□□□ 1.11
SFXN5-220ENST00000490056 SALL2Q9Y467 1007 aaPredicted RBP22.01■■□□□ 1.11
SFXN5-220ENST00000490056 MRC1P22897 1456 aa22.01■■□□□ 1.11
SFXN5-220ENST00000490056 BAG6P46379 1132 aa22■■□□□ 1.11
SFXN5-220ENST00000490056 LMOD3Q0VAK6 560 aa22■■□□□ 1.11
SFXN5-220ENST00000490056 ATG3Q9NT62 314 aa21.99■■□□□ 1.11
SFXN5-220ENST00000490056 SLC39A6Q13433 755 aa21.98■■□□□ 1.11
SFXN5-220ENST00000490056 EZH2Q15910 746 aaKnown RBP21.98■■□□□ 1.11
SFXN5-220ENST00000490056 CAMKK2Q96RR4 588 aa21.98■■□□□ 1.11
SFXN5-220ENST00000490056 SIPA1L3O60292 1781 aaPredicted RBP21.97■■□□□ 1.11
SFXN5-220ENST00000490056 PLSCR1O15162 318 aa21.97■■□□□ 1.11
SFXN5-220ENST00000490056 MIS18AQ9NYP9 233 aa21.96■■□□□ 1.11
SFXN5-220ENST00000490056 TAF7Q15545 349 aaPredicted RBP21.95■■□□□ 1.1
SFXN5-220ENST00000490056 PROM2Q8N271 834 aa21.95■■□□□ 1.1
SFXN5-220ENST00000490056 SMARCC1Q92922 1105 aaPredicted RBP21.95■■□□□ 1.1
SFXN5-220ENST00000490056 PALLDQ8WX93 1383 aa21.95■■□□□ 1.1
SFXN5-220ENST00000490056 BTBD11A6QL63 1104 aa21.94■■□□□ 1.1
SFXN5-220ENST00000490056 KCNQ4P56696 695 aa21.94■■□□□ 1.1
SFXN5-220ENST00000490056 KCNQ3O43525 872 aa21.93■■□□□ 1.1
SFXN5-220ENST00000490056 WWC1Q8IX03 1113 aa21.93■■□□□ 1.1
SFXN5-220ENST00000490056 PTCD1O75127 700 aaKnown RBP21.92■■□□□ 1.1
SFXN5-220ENST00000490056 TXNRD1Q16881 649 aa21.92■■□□□ 1.1
SFXN5-220ENST00000490056 CCDC27Q2M243 656 aa21.92■■□□□ 1.1
SFXN5-220ENST00000490056 RBM42Q9BTD8 480 aaKnown RBP21.92■■□□□ 1.1
SFXN5-220ENST00000490056 LAS1LQ9Y4W2 734 aaKnown RBP21.91■■□□□ 1.1
SFXN5-220ENST00000490056 PAPPAQ13219 1627 aa21.91■■□□□ 1.1
SFXN5-220ENST00000490056 LY75O60449 1722 aa21.9■■□□□ 1.1
SFXN5-220ENST00000490056 NCBP3Q53F19 620 aaKnown RBP21.9■■□□□ 1.1
SFXN5-220ENST00000490056 ZNF790Q6PG37 636 aa21.9■■□□□ 1.1
SFXN5-220ENST00000490056 LRRC4BQ9NT99 713 aa21.9■■□□□ 1.1
SFXN5-220ENST00000490056 RGPD3A6NKT7 1758 aaPredicted RBP21.89■■□□□ 1.1
SFXN5-220ENST00000490056 RGPD4Q7Z3J3 1758 aa21.89■■□□□ 1.1
SFXN5-220ENST00000490056 LOC102724428A0A0B4J2F2 783 aa21.89■■□□□ 1.09
SFXN5-220ENST00000490056 SIK1P57059 783 aa21.89■■□□□ 1.09
SFXN5-220ENST00000490056 TTC5Q8N0Z6 440 aa21.89■■□□□ 1.09
SFXN5-220ENST00000490056 SLC4A9Q96Q91 983 aa21.89■■□□□ 1.09
SFXN5-220ENST00000490056 CCNL1Q9UK58 526 aaPredicted RBP21.89■■□□□ 1.09
SFXN5-220ENST00000490056 KCPQ6ZWJ8 1503 aa21.87■■□□□ 1.09
SFXN5-220ENST00000490056 NGEFQ8N5V2 710 aa21.87■■□□□ 1.09
SFXN5-220ENST00000490056 ZNF496Q96IT1 587 aaPredicted RBP21.87■■□□□ 1.09
SFXN5-220ENST00000490056 TSPYL4Q9UJ04 414 aa21.87■■□□□ 1.09
SFXN5-220ENST00000490056 RREB1Q92766 1687 aa21.86■■□□□ 1.09
SFXN5-220ENST00000490056 CHL1O00533 1208 aa21.86■■□□□ 1.09
SFXN5-220ENST00000490056 ATP6V1AP38606 617 aa21.86■■□□□ 1.09
SFXN5-220ENST00000490056 CALD1Q05682 793 aaKnown RBP21.86■■□□□ 1.09
SFXN5-220ENST00000490056 SLC27A3Q5K4L6 730 aa21.86■■□□□ 1.09
SFXN5-220ENST00000490056 ZNF853P0CG23 659 aa21.85■■□□□ 1.09
SFXN5-220ENST00000490056 ITPK1Q13572 414 aa21.85■■□□□ 1.09
SFXN5-220ENST00000490056 KDM3BQ7LBC6 1761 aa21.84■■□□□ 1.09
SFXN5-220ENST00000490056 UBR2Q8IWV8 1755 aa21.84■■□□□ 1.09
SFXN5-220ENST00000490056 HNRNPUQ00839 825 aaKnown RBP eCLIP21.84■■□□□ 1.091e-6■■□□□ 12
SFXN5-220ENST00000490056 CFAP44Q96MT7 982 aa21.84■■□□□ 1.09
SFXN5-220ENST00000490056 ZNF521Q96K83 1311 aa21.83■■□□□ 1.09
SFXN5-220ENST00000490056 WDR63Q8IWG1 891 aa21.83■■□□□ 1.09
SFXN5-220ENST00000490056 FMNL2Q96PY5 1086 aa21.83■■□□□ 1.09
SFXN5-220ENST00000490056 IFT57Q9NWB7 429 aa21.83■■□□□ 1.09
SFXN5-220ENST00000490056 BABAM1Q9NWV8 329 aa21.83■■□□□ 1.09
SFXN5-220ENST00000490056 NUP188Q5SRE5 1749 aa21.83■■□□□ 1.08
SFXN5-220ENST00000490056 EIF4A1P60842 406 aaKnown RBP21.82■■□□□ 1.08
SFXN5-220ENST00000490056 GNAI1P63096 354 aa21.82■■□□□ 1.08
SFXN5-220ENST00000490056 MBIPQ9NS73 344 aa21.82■■□□□ 1.08
SFXN5-220ENST00000490056 DNAJC10Q8IXB1 793 aa21.81■■□□□ 1.08
SFXN5-220ENST00000490056 LINC00116Q8NCU8 138 aa21.81■■□□□ 1.08
SFXN5-220ENST00000490056 SPINK5Q9NQ38 1064 aaPredicted RBP21.81■■□□□ 1.08
SFXN5-220ENST00000490056 HEG1Q9ULI3 1381 aa21.81■■□□□ 1.08
SFXN5-220ENST00000490056 IL16Q14005 1332 aa21.8■■□□□ 1.08
SFXN5-220ENST00000490056 PRAMEF22A3QJZ6 481 aa21.8■■□□□ 1.08
SFXN5-220ENST00000490056 ANO8Q9HCE9 1232 aaPredicted RBP21.8■■□□□ 1.08
SFXN5-220ENST00000490056 TAF1LQ8IZX4 1826 aa21.8■■□□□ 1.08
SFXN5-220ENST00000490056 KRT24Q2M2I5 525 aa21.79■■□□□ 1.08
SFXN5-220ENST00000490056 TSR2Q969E8 191 aaKnown RBP21.79■■□□□ 1.08
SFXN5-220ENST00000490056 TJP1Q07157 1748 aa21.79■■□□□ 1.08
SFXN5-220ENST00000490056 C5P01031 1676 aa21.79■■□□□ 1.08
SFXN5-220ENST00000490056 VSIG10Q8N0Z9 540 aa21.78■■□□□ 1.08
SFXN5-220ENST00000490056 ZNF831Q5JPB2 1677 aa21.78■■□□□ 1.08
SFXN5-220ENST00000490056 ZNF827Q17R98 1081 aa21.77■■□□□ 1.08
SFXN5-220ENST00000490056 SNRPA1P09661 255 aaKnown RBP21.76■■□□□ 1.07
SFXN5-220ENST00000490056 USP16Q9Y5T5 823 aa21.76■■□□□ 1.07
SFXN5-220ENST00000490056 GIGYF1O75420 1035 aaPredicted RBP21.75■■□□□ 1.07
SFXN5-220ENST00000490056 CYP19A1P11511 503 aaPredicted RBP21.75■■□□□ 1.07
SFXN5-220ENST00000490056 GOLGA2Q08379 1002 aa21.75■■□□□ 1.07
SFXN5-220ENST00000490056 NBPF14Q5TI25 921 aa21.75■■□□□ 1.07
SFXN5-220ENST00000490056 AKT1S1Q96B36 256 aa21.75■■□□□ 1.07
SFXN5-220ENST00000490056 CDCA7LQ96GN5 454 aa21.75■■□□□ 1.07
SFXN5-220ENST00000490056 STK32BQ9NY57 414 aa21.75■■□□□ 1.07
SFXN5-220ENST00000490056 C4BP0C0L5 1744 aa21.75■■□□□ 1.07
SFXN5-220ENST00000490056 CRKLP46109 303 aaKnown RBP21.74■■□□□ 1.07
SFXN5-220ENST00000490056 SMIM5Q71RC9 77 aa21.74■■□□□ 1.07
SFXN5-220ENST00000490056 COL5A3P25940 1745 aaPredicted RBP21.74■■□□□ 1.07
SFXN5-220ENST00000490056 FANCIQ9NVI1 1328 aa21.74■■□□□ 1.07
SFXN5-220ENST00000490056 CICQ96RK0 1608 aaPredicted RBP21.73■■□□□ 1.07
SFXN5-220ENST00000490056 SLC15A2Q16348 729 aa21.73■■□□□ 1.07
SFXN5-220ENST00000490056 TEX13AQ9BXU3 409 aaPredicted RBP21.73■■□□□ 1.07
SFXN5-220ENST00000490056 MYH14Q7Z406 1995 aaKnown RBP21.72■■□□□ 1.07
SFXN5-220ENST00000490056 ELL2O00472 640 aaPredicted RBP21.72■■□□□ 1.07
SFXN5-220ENST00000490056 INTS5Q6P9B9 1019 aaKnown RBP21.72■■□□□ 1.07
SFXN5-220ENST00000490056 C8orf58Q8NAV2 365 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms