RNA–Protein interactions for RNA: ENST00000489960.5

TPRA1-209, Transcript of transmembrane protein adipocyte associated 1, human

APPRIS P1 TSL 5 BASIC

Gene TPRA1, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRA1-209	ENST00000489960	GCC1	Q96CN9	775 aa		32.92	■■■□□ 2.86
TPRA1-209	ENST00000489960	C8orf37	Q96NL8	207 aa		32.92	■■■□□ 2.86
TPRA1-209	ENST00000489960	WDR17	Q8IZU2	1322 aa		32.91	■■■□□ 2.86
TPRA1-209	ENST00000489960	SLC4A3	P48751	1232 aa		32.9	■■■□□ 2.86
TPRA1-209	ENST00000489960	LARP1	Q6PKG0	1096 aa	Known RBP	32.9	■■■□□ 2.86
TPRA1-209	ENST00000489960	DCTN1	Q14203	1278 aa		32.89	■■■□□ 2.86
TPRA1-209	ENST00000489960	TOM1L2	Q6ZVM7	507 aa		32.89	■■■□□ 2.86
TPRA1-209	ENST00000489960	NGLY1	Q96IV0	654 aa		32.89	■■■□□ 2.85
TPRA1-209	ENST00000489960	CRB1	P82279	1406 aa		32.88	■■■□□ 2.85
TPRA1-209	ENST00000489960	ELL2	O00472	640 aa	Predicted RBP	32.87	■■■□□ 2.85
TPRA1-209	ENST00000489960	MEX3C	Q5U5Q3	659 aa	Known RBP	32.86	■■■□□ 2.85
TPRA1-209	ENST00000489960	PLCH1	Q4KWH8	1693 aa		32.86	■■■□□ 2.85
TPRA1-209	ENST00000489960	CHD1L	Q86WJ1	897 aa		32.85	■■■□□ 2.85
TPRA1-209	ENST00000489960	LRRC37A3	O60309	1634 aa		32.85	■■■□□ 2.85
TPRA1-209	ENST00000489960	SLIT2	O94813	1529 aa		32.82	■■■□□ 2.84
TPRA1-209	ENST00000489960	NCAPD2	Q15021	1401 aa		32.81	■■■□□ 2.84
TPRA1-209	ENST00000489960	INTS3	Q68E01	1043 aa	Known RBP	32.81	■■■□□ 2.84
TPRA1-209	ENST00000489960	PTPRC	P08575	1304 aa		32.81	■■■□□ 2.84
TPRA1-209	ENST00000489960	FAM208A	Q9UK61	1670 aa	Known RBP	32.81	■■■□□ 2.84
TPRA1-209	ENST00000489960	GAS2L2	Q8NHY3	880 aa		32.81	■■■□□ 2.84
TPRA1-209	ENST00000489960	NFKBIB	Q15653	356 aa		32.8	■■■□□ 2.84
TPRA1-209	ENST00000489960	MCM10	Q7L590	875 aa		32.8	■■■□□ 2.84
TPRA1-209	ENST00000489960	RGS12	O14924	1447 aa		32.8	■■■□□ 2.84
TPRA1-209	ENST00000489960	CARD10	Q9BWT7	1032 aa		32.79	■■■□□ 2.84
TPRA1-209	ENST00000489960	HTATSF1	O43719	755 aa	Known RBP	32.79	■■■□□ 2.84
TPRA1-209	ENST00000489960	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.77	■■■□□ 2.84
TPRA1-209	ENST00000489960	RTF1	Q92541	710 aa	Known RBP	32.77	■■■□□ 2.84
TPRA1-209	ENST00000489960	BMP2KL	Q5H9B9	411 aa		32.76	■■■□□ 2.83
TPRA1-209	ENST00000489960	LNPK	Q9C0E8	428 aa		32.76	■■■□□ 2.83
TPRA1-209	ENST00000489960	UNC5CL	Q8IV45	518 aa		32.75	■■■□□ 2.83
TPRA1-209	ENST00000489960	NRAP	Q86VF7	1730 aa		32.75	■■■□□ 2.83
TPRA1-209	ENST00000489960	NWD2	Q9ULI1	1742 aa		32.75	■■■□□ 2.83
TPRA1-209	ENST00000489960	MTHFSD	Q2M296	383 aa	Known RBP	32.75	■■■□□ 2.83
TPRA1-209	ENST00000489960	RAPGEF4	Q8WZA2	1011 aa		32.75	■■■□□ 2.83
TPRA1-209	ENST00000489960	BCL9L	Q86UU0	1499 aa		32.74	■■■□□ 2.83
TPRA1-209	ENST00000489960	SIRT2	Q8IXJ6	389 aa		32.73	■■■□□ 2.83
TPRA1-209	ENST00000489960	C22orf23	Q9BZE7	217 aa		32.73	■■■□□ 2.83
TPRA1-209	ENST00000489960	USP21	Q9UK80	565 aa		32.73	■■■□□ 2.83
TPRA1-209	ENST00000489960	CCDC9	Q9Y3X0	531 aa	Known RBP	32.72	■■■□□ 2.83
TPRA1-209	ENST00000489960	C1orf115	Q9H7X2	142 aa		32.71	■■■□□ 2.83
TPRA1-209	ENST00000489960	MEGF6	O75095	1541 aa		32.7	■■■□□ 2.83
TPRA1-209	ENST00000489960	AFF2	P51816	1311 aa		32.7	■■■□□ 2.83
TPRA1-209	ENST00000489960	ANKRD45	Q5TZF3	282 aa		32.7	■■■□□ 2.83
TPRA1-209	ENST00000489960	CACNA1F	O60840	1977 aa		32.69	■■■□□ 2.82
TPRA1-209	ENST00000489960	TAT	P17735	454 aa	Predicted RBP	32.69	■■■□□ 2.82
TPRA1-209	ENST00000489960	SOS1	Q07889	1333 aa	Predicted RBP	32.68	■■■□□ 2.82
TPRA1-209	ENST00000489960	ATP10D	Q9P241	1426 aa		32.68	■■■□□ 2.82
TPRA1-209	ENST00000489960	KRT24	Q2M2I5	525 aa		32.67	■■■□□ 2.82
TPRA1-209	ENST00000489960	TSPYL4	Q9UJ04	414 aa		32.67	■■■□□ 2.82
TPRA1-209	ENST00000489960	MFAP1	P55081	439 aa	Known RBP	32.67	■■■□□ 2.82
TPRA1-209	ENST00000489960	SPATA31A1	Q5TZJ5	1347 aa		32.66	■■■□□ 2.82
TPRA1-209	ENST00000489960	IL2RB	P14784	551 aa		32.66	■■■□□ 2.82
TPRA1-209	ENST00000489960	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.66	■■■□□ 2.82
TPRA1-209	ENST00000489960	RPAP2	Q8IXW5	612 aa	Predicted RBP	32.65	■■■□□ 2.82
TPRA1-209	ENST00000489960	SPATA31A5	Q5VU36	1347 aa		32.65	■■■□□ 2.82
TPRA1-209	ENST00000489960	SPATA31A7	Q8IWB4	1347 aa		32.65	■■■□□ 2.82
TPRA1-209	ENST00000489960	TBC1D2	Q9BYX2	928 aa		32.65	■■■□□ 2.82
TPRA1-209	ENST00000489960	BABAM1	Q9NWV8	329 aa		32.65	■■■□□ 2.82
TPRA1-209	ENST00000489960	ANKRD44	Q8N8A2	993 aa		32.64	■■■□□ 2.82
TPRA1-209	ENST00000489960	DCTPP1	Q9H773	170 aa		32.64	■■■□□ 2.82
TPRA1-209	ENST00000489960	VPS72	Q15906	364 aa		32.63	■■■□□ 2.81
TPRA1-209	ENST00000489960	AMOT	Q4VCS5	1084 aa		32.63	■■■□□ 2.81
TPRA1-209	ENST00000489960	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.62	■■■□□ 2.81
TPRA1-209	ENST00000489960	EIF5B	O60841	1220 aa	Known RBP	32.62	■■■□□ 2.81
TPRA1-209	ENST00000489960	RBM25	P49756	843 aa	Known RBP	32.62	■■■□□ 2.81
TPRA1-209	ENST00000489960	GNAT3	A8MTJ3	354 aa		32.61	■■■□□ 2.81
TPRA1-209	ENST00000489960	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.61	■■■□□ 2.81
TPRA1-209	ENST00000489960	MAP3K5	Q99683	1374 aa		32.61	■■■□□ 2.81
TPRA1-209	ENST00000489960	ANTXR1	Q9H6X2	564 aa		32.6	■■■□□ 2.81
TPRA1-209	ENST00000489960	OVOS2	A0A0G2JMS6	1433 aa		32.6	■■■□□ 2.81
TPRA1-209	ENST00000489960	SPG7	Q9UQ90	795 aa		32.59	■■■□□ 2.81
TPRA1-209	ENST00000489960	SLC4A2	P04920	1241 aa		32.58	■■■□□ 2.81
TPRA1-209	ENST00000489960	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.57	■■■□□ 2.81
TPRA1-209	ENST00000489960	THRAP3	Q9Y2W1	955 aa	Known RBP	32.57	■■■□□ 2.81
TPRA1-209	ENST00000489960	CCT4	P50991	539 aa	Known RBP	32.57	■■■□□ 2.8
TPRA1-209	ENST00000489960	ZCRB1	Q8TBF4	217 aa	Known RBP	32.56	■■■□□ 2.8
TPRA1-209	ENST00000489960	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.56	■■■□□ 2.8
TPRA1-209	ENST00000489960	PARP4	Q9UKK3	1724 aa	Known RBP	32.56	■■■□□ 2.8
TPRA1-209	ENST00000489960	CEP85	Q6P2H3	762 aa		32.55	■■■□□ 2.8
TPRA1-209	ENST00000489960	C1orf141	Q5JVX7	400 aa		32.55	■■■□□ 2.8
TPRA1-209	ENST00000489960	DISP2	A7MBM2	1401 aa		32.55	■■■□□ 2.8
TPRA1-209	ENST00000489960	FAM98C	Q17RN3	349 aa	Known RBP	32.53	■■■□□ 2.8
TPRA1-209	ENST00000489960	AKAP4	Q5JQC9	854 aa		32.53	■■■□□ 2.8
TPRA1-209	ENST00000489960	FRAT2	O75474	233 aa	Predicted RBP	32.53	■■■□□ 2.8
TPRA1-209	ENST00000489960	STK31	Q9BXU1	1019 aa		32.53	■■■□□ 2.8
TPRA1-209	ENST00000489960	MIS18A	Q9NYP9	233 aa		32.53	■■■□□ 2.8
TPRA1-209	ENST00000489960	TRPC5	Q9UL62	973 aa	Predicted RBP	32.53	■■■□□ 2.8
TPRA1-209	ENST00000489960	CYP27B1	O15528	508 aa		32.52	■■■□□ 2.8
TPRA1-209	ENST00000489960	QTRT2	Q9H974	415 aa	Known RBP	32.52	■■■□□ 2.8
TPRA1-209	ENST00000489960	BARGIN	Q6ZT62	677 aa		32.51	■■■□□ 2.8
TPRA1-209	ENST00000489960	PLEKHG2	Q9H7P9	1386 aa		32.51	■■■□□ 2.8
TPRA1-209	ENST00000489960	CCDC30	Q5VVM6	783 aa		32.51	■■■□□ 2.79
TPRA1-209	ENST00000489960	DDX54	Q8TDD1	881 aa	Known RBP	32.51	■■■□□ 2.79
TPRA1-209	ENST00000489960	GJD4	Q96KN9	370 aa	Predicted RBP	32.51	■■■□□ 2.79
TPRA1-209	ENST00000489960	PKD1L3	Q7Z443	1732 aa		32.51	■■■□□ 2.79
TPRA1-209	ENST00000489960	PXDNL	A1KZ92	1463 aa		32.5	■■■□□ 2.79
TPRA1-209	ENST00000489960	GSE1	Q14687	1217 aa		32.5	■■■□□ 2.79
TPRA1-209	ENST00000489960	MPRIP	Q6WCQ1	1025 aa		32.5	■■■□□ 2.79
TPRA1-209	ENST00000489960	HMMR	O75330	724 aa		32.49	■■■□□ 2.79
TPRA1-209	ENST00000489960	PHKG2	P15735	406 aa		32.49	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms