RNA–Protein interactions for RNA: ENST00000489942.1

TUBB2A-202, Transcript of tubulin beta 2A class IIa, humanhuman

TSL 2

Gene TUBB2A, Length 817 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-202ENST00000489942 BTAF1O14981 1849 aa21.33■■□□□ 1.01
TUBB2A-202ENST00000489942 WWC1Q8IX03 1113 aa21.32■■□□□ 1
TUBB2A-202ENST00000489942 UPF1Q92900 1129 aaKnown RBP eCLIP21.32■■□□□ 1
TUBB2A-202ENST00000489942 SIPA1L3O60292 1781 aaPredicted RBP21.31■■□□□ 1
TUBB2A-202ENST00000489942 APBA3O96018 575 aa21.31■■□□□ 1
TUBB2A-202ENST00000489942 TAF7Q15545 349 aaPredicted RBP21.31■■□□□ 1
TUBB2A-202ENST00000489942 CCDC125Q86Z20 511 aa21.31■■□□□ 1
TUBB2A-202ENST00000489942 TNS1Q9HBL0 1735 aaKnown RBP21.31■■□□□ 1
TUBB2A-202ENST00000489942 ATG3Q9NT62 314 aa21.3■■□□□ 1
TUBB2A-202ENST00000489942 ASAP1Q9ULH1 1129 aa21.3■■□□□ 1
TUBB2A-202ENST00000489942 SF3B2Q13435 895 aaKnown RBP21.29■■□□□ 1
TUBB2A-202ENST00000489942 BTBD11A6QL63 1104 aa21.27■■□□□ 1
TUBB2A-202ENST00000489942 SLC39A6Q13433 755 aa21.27■■□□□ 1
TUBB2A-202ENST00000489942 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
TUBB2A-202ENST00000489942 HNRNPUQ00839 825 aaKnown RBP eCLIP21.26■□□□□ 0.99
TUBB2A-202ENST00000489942 CALD1Q05682 793 aaKnown RBP21.26■□□□□ 0.99
TUBB2A-202ENST00000489942 MIS18AQ9NYP9 233 aa21.26■□□□□ 0.99
TUBB2A-202ENST00000489942 ZNF521Q96K83 1311 aa21.26■□□□□ 0.99
TUBB2A-202ENST00000489942 PLSCR1O15162 318 aa21.25■□□□□ 0.99
TUBB2A-202ENST00000489942 WDR63Q8IWG1 891 aa21.25■□□□□ 0.99
TUBB2A-202ENST00000489942 LAS1LQ9Y4W2 734 aaKnown RBP21.25■□□□□ 0.99
TUBB2A-202ENST00000489942 KCNQ3O43525 872 aa21.24■□□□□ 0.99
TUBB2A-202ENST00000489942 BAG6P46379 1132 aa21.24■□□□□ 0.99
TUBB2A-202ENST00000489942 DEFB132Q7Z7B7 95 aa21.24■□□□□ 0.99
TUBB2A-202ENST00000489942 BABAM1Q9NWV8 329 aa21.24■□□□□ 0.99
TUBB2A-202ENST00000489942 PALLDQ8WX93 1383 aa21.23■□□□□ 0.99
TUBB2A-202ENST00000489942 PAPPAQ13219 1627 aa21.23■□□□□ 0.99
TUBB2A-202ENST00000489942 CHL1O00533 1208 aa21.23■□□□□ 0.99
TUBB2A-202ENST00000489942 ZNF853P0CG23 659 aa21.23■□□□□ 0.99
TUBB2A-202ENST00000489942 EN1Q05925 392 aaPredicted RBP21.23■□□□□ 0.99
TUBB2A-202ENST00000489942 ZNF790Q6PG37 636 aa21.23■□□□□ 0.99
TUBB2A-202ENST00000489942 CFAP44Q96MT7 982 aa21.23■□□□□ 0.99
TUBB2A-202ENST00000489942 IFT57Q9NWB7 429 aa21.23■□□□□ 0.99
TUBB2A-202ENST00000489942 IL16Q14005 1332 aa21.23■□□□□ 0.99
TUBB2A-202ENST00000489942 TSPYL4Q9UJ04 414 aa21.22■□□□□ 0.99
TUBB2A-202ENST00000489942 GNAI1P63096 354 aa21.21■□□□□ 0.99
TUBB2A-202ENST00000489942 TTC5Q8N0Z6 440 aa21.21■□□□□ 0.99
TUBB2A-202ENST00000489942 CAMKK2Q96RR4 588 aa21.21■□□□□ 0.99
TUBB2A-202ENST00000489942 KDM3BQ7LBC6 1761 aa21.2■□□□□ 0.99
TUBB2A-202ENST00000489942 PTCD1O75127 700 aaKnown RBP21.2■□□□□ 0.98
TUBB2A-202ENST00000489942 EZH2Q15910 746 aaKnown RBP21.2■□□□□ 0.98
TUBB2A-202ENST00000489942 PROM2Q8N271 834 aa21.2■□□□□ 0.98
TUBB2A-202ENST00000489942 RBM42Q9BTD8 480 aaKnown RBP21.2■□□□□ 0.98
TUBB2A-202ENST00000489942 LY75O60449 1722 aa21.2■□□□□ 0.98
TUBB2A-202ENST00000489942 KCPQ6ZWJ8 1503 aa21.19■□□□□ 0.98
TUBB2A-202ENST00000489942 LOC102724428A0A0B4J2F2 783 aa21.19■□□□□ 0.98
TUBB2A-202ENST00000489942 SIK1P57059 783 aa21.19■□□□□ 0.98
TUBB2A-202ENST00000489942 ZNF496Q96IT1 587 aaPredicted RBP21.19■□□□□ 0.98
TUBB2A-202ENST00000489942 MBIPQ9NS73 344 aa21.19■□□□□ 0.98
TUBB2A-202ENST00000489942 RGPD3A6NKT7 1758 aaPredicted RBP21.18■□□□□ 0.98
TUBB2A-202ENST00000489942 RGPD4Q7Z3J3 1758 aa21.18■□□□□ 0.98
TUBB2A-202ENST00000489942 UBR2Q8IWV8 1755 aa21.18■□□□□ 0.98
TUBB2A-202ENST00000489942 TXNRD1Q16881 649 aa21.18■□□□□ 0.98
TUBB2A-202ENST00000489942 SLC4A9Q96Q91 983 aa21.18■□□□□ 0.98
TUBB2A-202ENST00000489942 SPINK5Q9NQ38 1064 aaPredicted RBP21.18■□□□□ 0.98
TUBB2A-202ENST00000489942 EIF4A1P60842 406 aaKnown RBP21.17■□□□□ 0.98
TUBB2A-202ENST00000489942 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
TUBB2A-202ENST00000489942 FMNL2Q96PY5 1086 aa21.17■□□□□ 0.98
TUBB2A-202ENST00000489942 SOCS7O14512 581 aa21.16■□□□□ 0.98
TUBB2A-202ENST00000489942 KCNQ4P56696 695 aa21.16■□□□□ 0.98
TUBB2A-202ENST00000489942 SLC27A3Q5K4L6 730 aa21.16■□□□□ 0.98
TUBB2A-202ENST00000489942 LRRC4BQ9NT99 713 aa21.16■□□□□ 0.98
TUBB2A-202ENST00000489942 CCNL1Q9UK58 526 aaPredicted RBP21.16■□□□□ 0.98
TUBB2A-202ENST00000489942 ZBED9Q6R2W3 1325 aa21.15■□□□□ 0.98
TUBB2A-202ENST00000489942 ATP6V1AP38606 617 aa21.15■□□□□ 0.98
TUBB2A-202ENST00000489942 TSR2Q969E8 191 aaKnown RBP21.15■□□□□ 0.98
TUBB2A-202ENST00000489942 HEG1Q9ULI3 1381 aa21.14■□□□□ 0.98
TUBB2A-202ENST00000489942 SLFN5Q08AF3 891 aa21.14■□□□□ 0.97
TUBB2A-202ENST00000489942 ITPK1Q13572 414 aa21.14■□□□□ 0.97
TUBB2A-202ENST00000489942 E9PSI1 815 aa21.13■□□□□ 0.97
TUBB2A-202ENST00000489942 VSIG10Q8N0Z9 540 aa21.13■□□□□ 0.97
TUBB2A-202ENST00000489942 CDCA7LQ96GN5 454 aa21.13■□□□□ 0.97
TUBB2A-202ENST00000489942 MYH16Q9H6N6 1097 aa21.13■□□□□ 0.97
TUBB2A-202ENST00000489942 ZNF831Q5JPB2 1677 aa21.12■□□□□ 0.97
TUBB2A-202ENST00000489942 DNAJC10Q8IXB1 793 aa21.12■□□□□ 0.97
TUBB2A-202ENST00000489942 FANCIQ9NVI1 1328 aa21.11■□□□□ 0.97
TUBB2A-202ENST00000489942 SNRPA1P09661 255 aaKnown RBP21.11■□□□□ 0.97
TUBB2A-202ENST00000489942 KRT24Q2M2I5 525 aa21.11■□□□□ 0.97
TUBB2A-202ENST00000489942 YTHDC1Q96MU7 727 aaKnown RBP21.11■□□□□ 0.97
TUBB2A-202ENST00000489942 RREB1Q92766 1687 aa21.11■□□□□ 0.97
TUBB2A-202ENST00000489942 PRAMEF22A3QJZ6 481 aa21.1■□□□□ 0.97
TUBB2A-202ENST00000489942 GIGYF1O75420 1035 aaPredicted RBP21.1■□□□□ 0.97
TUBB2A-202ENST00000489942 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
TUBB2A-202ENST00000489942 LINC00116Q8NCU8 138 aa21.1■□□□□ 0.97
TUBB2A-202ENST00000489942 TJP1Q07157 1748 aa21.09■□□□□ 0.97
TUBB2A-202ENST00000489942 TAF1LQ8IZX4 1826 aa21.09■□□□□ 0.97
TUBB2A-202ENST00000489942 TEX13AQ9BXU3 409 aaPredicted RBP21.09■□□□□ 0.97
TUBB2A-202ENST00000489942 C8orf58Q8NAV2 365 aa21.08■□□□□ 0.97
TUBB2A-202ENST00000489942 CICQ96RK0 1608 aaPredicted RBP21.07■□□□□ 0.96
TUBB2A-202ENST00000489942 NUP188Q5SRE5 1749 aa21.07■□□□□ 0.96
TUBB2A-202ENST00000489942 CYP19A1P11511 503 aaPredicted RBP21.07■□□□□ 0.96
TUBB2A-202ENST00000489942 DUSP27Q5VZP5 1158 aa21.07■□□□□ 0.96
TUBB2A-202ENST00000489942 USP16Q9Y5T5 823 aa21.07■□□□□ 0.96
TUBB2A-202ENST00000489942 C5P01031 1676 aa21.06■□□□□ 0.96
TUBB2A-202ENST00000489942 STARD3NLO95772 234 aa21.06■□□□□ 0.96
TUBB2A-202ENST00000489942 HMGB2P26583 209 aaKnown RBP21.06■□□□□ 0.96
TUBB2A-202ENST00000489942 EXOSC9Q06265 439 aaKnown RBP21.06■□□□□ 0.96
TUBB2A-202ENST00000489942 COL5A3P25940 1745 aaPredicted RBP21.05■□□□□ 0.96
TUBB2A-202ENST00000489942 ELL2O00472 640 aaPredicted RBP21.05■□□□□ 0.96
TUBB2A-202ENST00000489942 TSPYL6Q8N831 410 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms