RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 ALDH1L2Q3SY69 923 aa12.19□□□□□ -0.46
RAB3GAP1-205ENST00000489858 ADGRD1Q6QNK2 874 aa12.19□□□□□ -0.46
RAB3GAP1-205ENST00000489858 SSH1Q8WYL5 1049 aa12.19□□□□□ -0.46
RAB3GAP1-205ENST00000489858 RWDD1Q9H446 243 aaPredicted RBP12.19□□□□□ -0.46
RAB3GAP1-205ENST00000489858 TNNQ9UQP3 1299 aa12.19□□□□□ -0.46
RAB3GAP1-205ENST00000489858 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
RAB3GAP1-205ENST00000489858 IPO8O15397 1037 aaKnown RBP12.18□□□□□ -0.46
RAB3GAP1-205ENST00000489858 ATF7IPQ6VMQ6 1270 aa12.18□□□□□ -0.46
RAB3GAP1-205ENST00000489858 DDX19BQ9UMR2 479 aa12.18□□□□□ -0.46
RAB3GAP1-205ENST00000489858 CEP170BQ9Y4F5 1589 aaPredicted RBP12.18□□□□□ -0.46
RAB3GAP1-205ENST00000489858 RGPD1P0DJD0 1748 aa12.17□□□□□ -0.46
RAB3GAP1-205ENST00000489858 ACEP12821 1306 aa12.17□□□□□ -0.46
RAB3GAP1-205ENST00000489858 TK2O00142 265 aa12.17□□□□□ -0.46
RAB3GAP1-205ENST00000489858 HMOX1P09601 288 aa12.17□□□□□ -0.46
RAB3GAP1-205ENST00000489858 GNAI1P63096 354 aa12.17□□□□□ -0.46
RAB3GAP1-205ENST00000489858 RYDENQ9NUL5 291 aaKnown RBP12.17□□□□□ -0.46
RAB3GAP1-205ENST00000489858 IFT57Q9NWB7 429 aa12.17□□□□□ -0.46
RAB3GAP1-205ENST00000489858 TBX22Q9Y458 520 aa12.17□□□□□ -0.46
RAB3GAP1-205ENST00000489858 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
RAB3GAP1-205ENST00000489858 TTC21AQ8NDW8 1320 aa12.16□□□□□ -0.46
RAB3GAP1-205ENST00000489858 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
RAB3GAP1-205ENST00000489858 TRIM27P14373 513 aa12.16□□□□□ -0.46
RAB3GAP1-205ENST00000489858 THEMISQ8N1K5 641 aaPredicted RBP12.16□□□□□ -0.46
RAB3GAP1-205ENST00000489858 PCDHB15Q9Y5E8 787 aa12.16□□□□□ -0.46
RAB3GAP1-205ENST00000489858 ANKARQ7Z5J8 1434 aa12.16□□□□□ -0.46
RAB3GAP1-205ENST00000489858 USP31Q70CQ4 1352 aa12.16□□□□□ -0.46
RAB3GAP1-205ENST00000489858 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
RAB3GAP1-205ENST00000489858 SSH2Q76I76 1423 aa12.15□□□□□ -0.46
RAB3GAP1-205ENST00000489858 CEBPAP49715 358 aaPredicted RBP12.15□□□□□ -0.46
RAB3GAP1-205ENST00000489858 NKX1-1Q15270 411 aaPredicted RBP12.15□□□□□ -0.46
RAB3GAP1-205ENST00000489858 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
RAB3GAP1-205ENST00000489858 ZNF142P52746 1687 aaPredicted RBP12.15□□□□□ -0.46
RAB3GAP1-205ENST00000489858 PIK3R4Q99570 1358 aa12.15□□□□□ -0.46
RAB3GAP1-205ENST00000489858 FBLN1P23142 703 aa12.14□□□□□ -0.47
RAB3GAP1-205ENST00000489858 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
RAB3GAP1-205ENST00000489858 RRS1Q15050 365 aaKnown RBP12.14□□□□□ -0.47
RAB3GAP1-205ENST00000489858 RTL5Q5HYW3 569 aaPredicted RBP12.14□□□□□ -0.47
RAB3GAP1-205ENST00000489858 ITPRIPQ8IWB1 547 aa12.14□□□□□ -0.47
RAB3GAP1-205ENST00000489858 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
RAB3GAP1-205ENST00000489858 SLC26A8Q96RN1 970 aa12.14□□□□□ -0.47
RAB3GAP1-205ENST00000489858 CHMP4BQ9H444 224 aaKnown RBP12.14□□□□□ -0.47
RAB3GAP1-205ENST00000489858 NOB1Q9ULX3 412 aaKnown RBP12.14□□□□□ -0.47
RAB3GAP1-205ENST00000489858 PIK3C2AO00443 1686 aa12.13□□□□□ -0.47
RAB3GAP1-205ENST00000489858 HCSTQ9UBK5 93 aa12.13□□□□□ -0.47
RAB3GAP1-205ENST00000489858 DAXXQ9UER7 740 aaPredicted RBP12.13□□□□□ -0.47
RAB3GAP1-205ENST00000489858 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
RAB3GAP1-205ENST00000489858 AMOTL2Q9Y2J4 779 aa12.13□□□□□ -0.47
RAB3GAP1-205ENST00000489858 LAS1LQ9Y4W2 734 aaKnown RBP12.13□□□□□ -0.47
RAB3GAP1-205ENST00000489858 ARHGEF10O15013 1369 aa12.13□□□□□ -0.47
RAB3GAP1-205ENST00000489858 HDAC1Q13547 482 aaPredicted RBP12.12□□□□□ -0.47
RAB3GAP1-205ENST00000489858 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
RAB3GAP1-205ENST00000489858 RGPD8O14715 1765 aaPredicted RBP12.11□□□□□ -0.47
RAB3GAP1-205ENST00000489858 HRO43593 1189 aa12.11□□□□□ -0.47
RAB3GAP1-205ENST00000489858 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
RAB3GAP1-205ENST00000489858 PSEN2P49810 448 aa12.11□□□□□ -0.47
RAB3GAP1-205ENST00000489858 EIF4A2Q14240 407 aaKnown RBP12.11□□□□□ -0.47
RAB3GAP1-205ENST00000489858 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
RAB3GAP1-205ENST00000489858 SBNO1A3KN83 1393 aa12.1□□□□□ -0.47
RAB3GAP1-205ENST00000489858 FLT4P35916 1363 aa12.1□□□□□ -0.47
RAB3GAP1-205ENST00000489858 HAP1P54257 671 aaPredicted RBP12.1□□□□□ -0.47
RAB3GAP1-205ENST00000489858 NBR1Q14596 966 aa12.1□□□□□ -0.47
RAB3GAP1-205ENST00000489858 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
RAB3GAP1-205ENST00000489858 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
RAB3GAP1-205ENST00000489858 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
RAB3GAP1-205ENST00000489858 CRISPLD2Q9H0B8 497 aa12.1□□□□□ -0.47
RAB3GAP1-205ENST00000489858 MRPL50Q8N5N7 158 aaKnown RBP12.09□□□□□ -0.47
RAB3GAP1-205ENST00000489858 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
RAB3GAP1-205ENST00000489858 UPF2Q9HAU5 1272 aaKnown RBP12.09□□□□□ -0.47
RAB3GAP1-205ENST00000489858 MBIPQ9NS73 344 aa12.09□□□□□ -0.47
RAB3GAP1-205ENST00000489858 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
RAB3GAP1-205ENST00000489858 VAMP4O75379 141 aa12.08□□□□□ -0.48
RAB3GAP1-205ENST00000489858 TWISTNBQ3B726 338 aaPredicted RBP12.08□□□□□ -0.48
RAB3GAP1-205ENST00000489858 SULT6B1Q6IMI4 303 aa12.08□□□□□ -0.48
RAB3GAP1-205ENST00000489858 NGDNQ8NEJ9 315 aaKnown RBP12.08□□□□□ -0.48
RAB3GAP1-205ENST00000489858 API5Q9BZZ5 524 aaKnown RBP12.08□□□□□ -0.48
RAB3GAP1-205ENST00000489858 ZBTB40Q9NUA8 1239 aa12.08□□□□□ -0.48
RAB3GAP1-205ENST00000489858 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.48
RAB3GAP1-205ENST00000489858 KIF24Q5T7B8 1368 aa12.07□□□□□ -0.48
RAB3GAP1-205ENST00000489858 CHD2O14647 1828 aaKnown RBP12.07□□□□□ -0.48
RAB3GAP1-205ENST00000489858 SMC5Q8IY18 1101 aa12.07□□□□□ -0.48
RAB3GAP1-205ENST00000489858 LRRC37A3O60309 1634 aa12.07□□□□□ -0.48
RAB3GAP1-205ENST00000489858 ABCC4O15439 1325 aa12.07□□□□□ -0.48
RAB3GAP1-205ENST00000489858 KIAA0232Q92628 1395 aa12.06□□□□□ -0.48
RAB3GAP1-205ENST00000489858 AEBP1Q8IUX7 1158 aa12.06□□□□□ -0.48
RAB3GAP1-205ENST00000489858 USP35Q9P2H5 1018 aa12.05□□□□□ -0.48
RAB3GAP1-205ENST00000489858 MAP3K19Q56UN5 1328 aa12.05□□□□□ -0.48
RAB3GAP1-205ENST00000489858 KDRP35968 1356 aa12.05□□□□□ -0.48
RAB3GAP1-205ENST00000489858 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
RAB3GAP1-205ENST00000489858 BECN1Q14457 450 aa12.04□□□□□ -0.48
RAB3GAP1-205ENST00000489858 HSP90AB2PQ58FF8 381 aa12.04□□□□□ -0.48
RAB3GAP1-205ENST00000489858 PPP1R15BQ5SWA1 713 aa12.04□□□□□ -0.48
RAB3GAP1-205ENST00000489858 TSPYL6Q8N831 410 aa12.04□□□□□ -0.48
RAB3GAP1-205ENST00000489858 PLA2G2EQ9NZK7 142 aa12.04□□□□□ -0.48
RAB3GAP1-205ENST00000489858 RTL1A6NKG5 1358 aa12.04□□□□□ -0.48
RAB3GAP1-205ENST00000489858 FAM83GA6ND36 823 aa12.03□□□□□ -0.48
RAB3GAP1-205ENST00000489858 AMPHP49418 695 aa12.03□□□□□ -0.48
RAB3GAP1-205ENST00000489858 C8orf58Q8NAV2 365 aa12.03□□□□□ -0.48
RAB3GAP1-205ENST00000489858 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.48
RAB3GAP1-205ENST00000489858 KCNK17Q96T54 332 aa12.03□□□□□ -0.48
RAB3GAP1-205ENST00000489858 USP19O94966 1318 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms