RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 MTFR1LQ9H019 292 aa16.41■□□□□ 0.22
COL4A5-206ENST00000489230 MAP3K5Q99683 1374 aa16.4■□□□□ 0.22
COL4A5-206ENST00000489230 LMOD3Q0VAK6 560 aa16.4■□□□□ 0.22
COL4A5-206ENST00000489230 CCDC184Q52MB2 194 aa16.4■□□□□ 0.22
COL4A5-206ENST00000489230 NFATC2IPQ8NCF5 419 aa16.4■□□□□ 0.22
COL4A5-206ENST00000489230 PIGBQ92521 554 aa16.4■□□□□ 0.22
COL4A5-206ENST00000489230 SYT17Q9BSW7 474 aa16.4■□□□□ 0.22
COL4A5-206ENST00000489230 LGR6Q9HBX8 967 aa16.4■□□□□ 0.22
COL4A5-206ENST00000489230 UTRNP46939 3433 aa16.4■□□□□ 0.22
COL4A5-206ENST00000489230 TEFQ10587 303 aa16.39■□□□□ 0.21
COL4A5-206ENST00000489230 SLC27A3Q5K4L6 730 aa16.39■□□□□ 0.21
COL4A5-206ENST00000489230 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
COL4A5-206ENST00000489230 KAT6BQ8WYB5 2073 aa16.39■□□□□ 0.21
COL4A5-206ENST00000489230 RIPK4P57078 832 aa16.38■□□□□ 0.21
COL4A5-206ENST00000489230 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
COL4A5-206ENST00000489230 SHANK3Q9BYB0 1731 aa16.37■□□□□ 0.21
COL4A5-206ENST00000489230 TMPOP42166 694 aaKnown RBP16.37■□□□□ 0.21
COL4A5-206ENST00000489230 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
COL4A5-206ENST00000489230 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
COL4A5-206ENST00000489230 ARXQ96QS3 562 aa16.35■□□□□ 0.21
COL4A5-206ENST00000489230 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
COL4A5-206ENST00000489230 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
COL4A5-206ENST00000489230 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
COL4A5-206ENST00000489230 FAM9BQ8IZU0 186 aa16.34■□□□□ 0.21
COL4A5-206ENST00000489230 NGEFQ8N5V2 710 aa16.34■□□□□ 0.21
COL4A5-206ENST00000489230 ATG3Q9NT62 314 aa16.34■□□□□ 0.21
COL4A5-206ENST00000489230 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
COL4A5-206ENST00000489230 MCM10Q7L590 875 aa16.33■□□□□ 0.2
COL4A5-206ENST00000489230 MIER1Q8N108 512 aa16.33■□□□□ 0.2
COL4A5-206ENST00000489230 SGIP1Q9BQI5 828 aa16.33■□□□□ 0.2
COL4A5-206ENST00000489230 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
COL4A5-206ENST00000489230 CEMIPQ8WUJ3 1361 aa16.33■□□□□ 0.2
COL4A5-206ENST00000489230 APAF1O14727 1248 aa16.32■□□□□ 0.2
COL4A5-206ENST00000489230 CALD1Q05682 793 aaKnown RBP16.32■□□□□ 0.2
COL4A5-206ENST00000489230 NEUROD2Q15784 382 aa16.32■□□□□ 0.2
COL4A5-206ENST00000489230 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
COL4A5-206ENST00000489230 CCNL1Q9UK58 526 aaPredicted RBP16.32■□□□□ 0.2
COL4A5-206ENST00000489230 CHD4Q14839 1912 aa16.31■□□□□ 0.2
COL4A5-206ENST00000489230 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
COL4A5-206ENST00000489230 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
COL4A5-206ENST00000489230 BABAM1Q9NWV8 329 aa16.31■□□□□ 0.2
COL4A5-206ENST00000489230 LOC102724428A0A0B4J2F2 783 aa16.3■□□□□ 0.2
COL4A5-206ENST00000489230 SIK1P57059 783 aa16.3■□□□□ 0.2
COL4A5-206ENST00000489230 GPR162Q16538 588 aa16.3■□□□□ 0.2
COL4A5-206ENST00000489230 KLHL34Q8N239 644 aa16.3■□□□□ 0.2
COL4A5-206ENST00000489230 DOT1LQ8TEK3 1739 aa16.3■□□□□ 0.2
COL4A5-206ENST00000489230 ATP6V1AP38606 617 aa16.29■□□□□ 0.2
COL4A5-206ENST00000489230 C1QTNF8P60827 252 aa16.29■□□□□ 0.2
COL4A5-206ENST00000489230 DCTN1Q14203 1278 aa16.29■□□□□ 0.2
COL4A5-206ENST00000489230 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
COL4A5-206ENST00000489230 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
COL4A5-206ENST00000489230 PAPPAQ13219 1627 aa16.28■□□□□ 0.2
COL4A5-206ENST00000489230 POLD1P28340 1107 aa16.28■□□□□ 0.2
COL4A5-206ENST00000489230 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
COL4A5-206ENST00000489230 CCDC27Q2M243 656 aa16.28■□□□□ 0.2
COL4A5-206ENST00000489230 ZNF790Q6PG37 636 aa16.28■□□□□ 0.2
COL4A5-206ENST00000489230 VSIG10Q8N0Z9 540 aa16.28■□□□□ 0.2
COL4A5-206ENST00000489230 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
COL4A5-206ENST00000489230 BTAF1O14981 1849 aa16.28■□□□□ 0.2
COL4A5-206ENST00000489230 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.2
COL4A5-206ENST00000489230 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
COL4A5-206ENST00000489230 SCN11AQ9UI33 1791 aa16.27■□□□□ 0.2
COL4A5-206ENST00000489230 ITGB4P16144 1822 aa16.26■□□□□ 0.19
COL4A5-206ENST00000489230 SLC39A6Q13433 755 aa16.26■□□□□ 0.19
COL4A5-206ENST00000489230 PELP1Q8IZL8 1130 aaKnown RBP16.26■□□□□ 0.19
COL4A5-206ENST00000489230 SLC16A10Q8TF71 515 aa16.26■□□□□ 0.19
COL4A5-206ENST00000489230 FMNL2Q96PY5 1086 aa16.26■□□□□ 0.19
COL4A5-206ENST00000489230 LRRC4BQ9NT99 713 aa16.26■□□□□ 0.19
COL4A5-206ENST00000489230 ADAMTS7Q9UKP4 1686 aa16.25■□□□□ 0.19
COL4A5-206ENST00000489230 MRC1P22897 1456 aa16.25■□□□□ 0.19
COL4A5-206ENST00000489230 TOGARAM1Q9Y4F4 1720 aa16.25■□□□□ 0.19
COL4A5-206ENST00000489230 GIGYF1O75420 1035 aaPredicted RBP16.23■□□□□ 0.19
COL4A5-206ENST00000489230 STARD3NLO95772 234 aa16.23■□□□□ 0.19
COL4A5-206ENST00000489230 RC3H1Q5TC82 1133 aaKnown RBP16.23■□□□□ 0.19
COL4A5-206ENST00000489230 FLAD1Q8NFF5 587 aa16.23■□□□□ 0.19
COL4A5-206ENST00000489230 AKT1S1Q96B36 256 aa16.23■□□□□ 0.19
COL4A5-206ENST00000489230 THUMPD2Q9BTF0 503 aaKnown RBP16.23■□□□□ 0.19
COL4A5-206ENST00000489230 TFCP2L1Q9NZI6 479 aa16.23■□□□□ 0.19
COL4A5-206ENST00000489230 CHL1O00533 1208 aa16.22■□□□□ 0.19
COL4A5-206ENST00000489230 GNAI1P63096 354 aa16.22■□□□□ 0.19
COL4A5-206ENST00000489230 WDR63Q8IWG1 891 aa16.22■□□□□ 0.19
COL4A5-206ENST00000489230 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
COL4A5-206ENST00000489230 TSPYL4Q9UJ04 414 aa16.22■□□□□ 0.19
COL4A5-206ENST00000489230 SNRPA1P09661 255 aaKnown RBP16.21■□□□□ 0.19
COL4A5-206ENST00000489230 KCNQ4P56696 695 aa16.21■□□□□ 0.19
COL4A5-206ENST00000489230 WWC1Q8IX03 1113 aa16.21■□□□□ 0.19
COL4A5-206ENST00000489230 ZNF496Q96IT1 587 aaPredicted RBP16.21■□□□□ 0.19
COL4A5-206ENST00000489230 AK7Q96M32 723 aa16.21■□□□□ 0.19
COL4A5-206ENST00000489230 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
COL4A5-206ENST00000489230 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.19
COL4A5-206ENST00000489230 PNPLA7Q6ZV29 1317 aa16.2■□□□□ 0.18
COL4A5-206ENST00000489230 ITPK1Q13572 414 aa16.2■□□□□ 0.18
COL4A5-206ENST00000489230 SLC4A9Q96Q91 983 aa16.2■□□□□ 0.18
COL4A5-206ENST00000489230 CHMP4AQ9BY43 222 aa16.2■□□□□ 0.18
COL4A5-206ENST00000489230 LAS1LQ9Y4W2 734 aaKnown RBP16.2■□□□□ 0.18
COL4A5-206ENST00000489230 IL16Q14005 1332 aa16.19■□□□□ 0.18
COL4A5-206ENST00000489230 QSER1Q2KHR3 1735 aa16.19■□□□□ 0.18
COL4A5-206ENST00000489230 HEG1Q9ULI3 1381 aa16.19■□□□□ 0.18
COL4A5-206ENST00000489230 LY75O60449 1722 aa16.19■□□□□ 0.18
COL4A5-206ENST00000489230 MSH5O43196 834 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms