RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
SMKR1-202ENST00000488846 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
SMKR1-202ENST00000488846 SIPA1L3O60292 1781 aaPredicted RBP11.75□□□□□ -0.53
SMKR1-202ENST00000488846 CABP4P57796 275 aa11.75□□□□□ -0.53
SMKR1-202ENST00000488846 NFATC2IPQ8NCF5 419 aa11.75□□□□□ -0.53
SMKR1-202ENST00000488846 MRS2Q9HD23 443 aa11.75□□□□□ -0.53
SMKR1-202ENST00000488846 ATG3Q9NT62 314 aa11.75□□□□□ -0.53
SMKR1-202ENST00000488846 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
SMKR1-202ENST00000488846 ASAP1Q9ULH1 1129 aa11.75□□□□□ -0.53
SMKR1-202ENST00000488846 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
SMKR1-202ENST00000488846 NEFMP07197 916 aa11.74□□□□□ -0.53
SMKR1-202ENST00000488846 TMPOP42166 694 aaKnown RBP11.74□□□□□ -0.53
SMKR1-202ENST00000488846 MAPK8IP3Q9UPT6 1336 aa11.74□□□□□ -0.53
SMKR1-202ENST00000488846 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
SMKR1-202ENST00000488846 CCER2I3L3R5 266 aa11.73□□□□□ -0.53
SMKR1-202ENST00000488846 DIEXFQ68CQ4 756 aaKnown RBP11.73□□□□□ -0.53
SMKR1-202ENST00000488846 CICQ96RK0 1608 aaPredicted RBP11.73□□□□□ -0.53
SMKR1-202ENST00000488846 HMGB2P26583 209 aaKnown RBP11.72□□□□□ -0.53
SMKR1-202ENST00000488846 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
SMKR1-202ENST00000488846 CCDC146Q8IYE0 955 aa11.72□□□□□ -0.53
SMKR1-202ENST00000488846 LOC102724428A0A0B4J2F2 783 aa11.71□□□□□ -0.53
SMKR1-202ENST00000488846 SIK1P57059 783 aa11.71□□□□□ -0.53
SMKR1-202ENST00000488846 MCM10Q7L590 875 aa11.71□□□□□ -0.53
SMKR1-202ENST00000488846 RTF1Q92541 710 aaKnown RBP11.71□□□□□ -0.53
SMKR1-202ENST00000488846 SLC4A9Q96Q91 983 aa11.71□□□□□ -0.53
SMKR1-202ENST00000488846 UBR2Q8IWV8 1755 aa11.71□□□□□ -0.54
SMKR1-202ENST00000488846 KCPQ6ZWJ8 1503 aa11.7□□□□□ -0.54
SMKR1-202ENST00000488846 TAF1LQ8IZX4 1826 aa11.7□□□□□ -0.54
SMKR1-202ENST00000488846 RIPK4P57078 832 aa11.7□□□□□ -0.54
SMKR1-202ENST00000488846 TEFQ10587 303 aa11.7□□□□□ -0.54
SMKR1-202ENST00000488846 DCTN1Q14203 1278 aa11.7□□□□□ -0.54
SMKR1-202ENST00000488846 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
SMKR1-202ENST00000488846 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
SMKR1-202ENST00000488846 CCNL1Q9UK58 526 aaPredicted RBP11.7□□□□□ -0.54
SMKR1-202ENST00000488846 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
SMKR1-202ENST00000488846 C5P01031 1676 aa11.69□□□□□ -0.54
SMKR1-202ENST00000488846 SRCAPQ6ZRS2 3230 aa11.69□□□□□ -0.54
SMKR1-202ENST00000488846 APAF1O14727 1248 aa11.69□□□□□ -0.54
SMKR1-202ENST00000488846 LMOD3Q0VAK6 560 aa11.69□□□□□ -0.54
SMKR1-202ENST00000488846 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
SMKR1-202ENST00000488846 ZNF790Q6PG37 636 aa11.69□□□□□ -0.54
SMKR1-202ENST00000488846 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
SMKR1-202ENST00000488846 ITPK1Q13572 414 aa11.68□□□□□ -0.54
SMKR1-202ENST00000488846 TAF7Q15545 349 aaPredicted RBP11.68□□□□□ -0.54
SMKR1-202ENST00000488846 SLC15A2Q16348 729 aa11.68□□□□□ -0.54
SMKR1-202ENST00000488846 VSIG10Q8N0Z9 540 aa11.68□□□□□ -0.54
SMKR1-202ENST00000488846 BABAM1Q9NWV8 329 aa11.68□□□□□ -0.54
SMKR1-202ENST00000488846 COL5A3P25940 1745 aaPredicted RBP11.68□□□□□ -0.54
SMKR1-202ENST00000488846 QSER1Q2KHR3 1735 aa11.68□□□□□ -0.54
SMKR1-202ENST00000488846 KCNQ4P56696 695 aa11.67□□□□□ -0.54
SMKR1-202ENST00000488846 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
SMKR1-202ENST00000488846 CCDC27Q2M243 656 aa11.67□□□□□ -0.54
SMKR1-202ENST00000488846 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
SMKR1-202ENST00000488846 C4BP0C0L5 1744 aa11.66□□□□□ -0.54
SMKR1-202ENST00000488846 TJP1Q07157 1748 aa11.66□□□□□ -0.54
SMKR1-202ENST00000488846 BTBD11A6QL63 1104 aa11.66□□□□□ -0.54
SMKR1-202ENST00000488846 ATP6V1AP38606 617 aa11.66□□□□□ -0.54
SMKR1-202ENST00000488846 RC3H1Q5TC82 1133 aaKnown RBP11.66□□□□□ -0.54
SMKR1-202ENST00000488846 MIER1Q8N108 512 aa11.66□□□□□ -0.54
SMKR1-202ENST00000488846 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
SMKR1-202ENST00000488846 THUMPD2Q9BTF0 503 aaKnown RBP11.66□□□□□ -0.54
SMKR1-202ENST00000488846 STK32BQ9NY57 414 aa11.66□□□□□ -0.54
SMKR1-202ENST00000488846 RRP7AQ9Y3A4 280 aaKnown RBP11.66□□□□□ -0.54
SMKR1-202ENST00000488846 HEG1Q9ULI3 1381 aa11.66□□□□□ -0.54
SMKR1-202ENST00000488846 CASZ1Q86V15 1759 aa11.65□□□□□ -0.54
SMKR1-202ENST00000488846 PTCD1O75127 700 aaKnown RBP11.65□□□□□ -0.54
SMKR1-202ENST00000488846 R3HDM1Q15032 1099 aaKnown RBP11.65□□□□□ -0.54
SMKR1-202ENST00000488846 NGEFQ8N5V2 710 aa11.65□□□□□ -0.54
SMKR1-202ENST00000488846 ZNF496Q96IT1 587 aaPredicted RBP11.65□□□□□ -0.54
SMKR1-202ENST00000488846 RBM42Q9BTD8 480 aaKnown RBP11.65□□□□□ -0.54
SMKR1-202ENST00000488846 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
SMKR1-202ENST00000488846 KCNQ3O43525 872 aa11.64□□□□□ -0.55
SMKR1-202ENST00000488846 ZNF853P0CG23 659 aa11.64□□□□□ -0.55
SMKR1-202ENST00000488846 NEUROD2Q15784 382 aa11.64□□□□□ -0.55
SMKR1-202ENST00000488846 FAM9BQ8IZU0 186 aa11.64□□□□□ -0.55
SMKR1-202ENST00000488846 TTC5Q8N0Z6 440 aa11.64□□□□□ -0.55
SMKR1-202ENST00000488846 TUBGCP6Q96RT7 1819 aa11.64□□□□□ -0.55
SMKR1-202ENST00000488846 UBR3Q6ZT12 1888 aa11.63□□□□□ -0.55
SMKR1-202ENST00000488846 PNPLA7Q6ZV29 1317 aa11.63□□□□□ -0.55
SMKR1-202ENST00000488846 MYH14Q7Z406 1995 aaKnown RBP11.63□□□□□ -0.55
SMKR1-202ENST00000488846 CHL1O00533 1208 aa11.63□□□□□ -0.55
SMKR1-202ENST00000488846 FMNL2Q96PY5 1086 aa11.63□□□□□ -0.55
SMKR1-202ENST00000488846 PSDA5PKW4 1024 aaPredicted RBP11.62□□□□□ -0.55
SMKR1-202ENST00000488846 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
SMKR1-202ENST00000488846 EIF4A1P60842 406 aaKnown RBP11.62□□□□□ -0.55
SMKR1-202ENST00000488846 AMIGO3Q86WK7 504 aa11.62□□□□□ -0.55
SMKR1-202ENST00000488846 WWC1Q8IX03 1113 aa11.62□□□□□ -0.55
SMKR1-202ENST00000488846 DNAJC10Q8IXB1 793 aa11.62□□□□□ -0.55
SMKR1-202ENST00000488846 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
SMKR1-202ENST00000488846 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
SMKR1-202ENST00000488846 SSFA2P28290 1259 aa11.61□□□□□ -0.55
SMKR1-202ENST00000488846 CRKLP46109 303 aaKnown RBP11.61□□□□□ -0.55
SMKR1-202ENST00000488846 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
SMKR1-202ENST00000488846 INTS5Q6P9B9 1019 aaKnown RBP11.61□□□□□ -0.55
SMKR1-202ENST00000488846 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
SMKR1-202ENST00000488846 PDGFDQ9GZP0 370 aaPredicted RBP11.61□□□□□ -0.55
SMKR1-202ENST00000488846 MIS18AQ9NYP9 233 aa11.61□□□□□ -0.55
SMKR1-202ENST00000488846 TFCP2L1Q9NZI6 479 aa11.61□□□□□ -0.55
SMKR1-202ENST00000488846 IL16Q14005 1332 aa11.6□□□□□ -0.55
SMKR1-202ENST00000488846 COL24A1Q17RW2 1714 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms