RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
PHF1-210ENST00000488767 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
PHF1-210ENST00000488767 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
PHF1-210ENST00000488767 ATP6V1AP38606 617 aa17.08■□□□□ 0.32
PHF1-210ENST00000488767 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.32
PHF1-210ENST00000488767 AK7Q96M32 723 aa17.08■□□□□ 0.32
PHF1-210ENST00000488767 AKT1S1Q96B36 256 aa17.07■□□□□ 0.32
PHF1-210ENST00000488767 LGR6Q9HBX8 967 aa17.07■□□□□ 0.32
PHF1-210ENST00000488767 SPON1Q9HCB6 807 aa17.07■□□□□ 0.32
PHF1-210ENST00000488767 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
PHF1-210ENST00000488767 TTC5Q8N0Z6 440 aa17.06■□□□□ 0.32
PHF1-210ENST00000488767 SCN11AQ9UI33 1791 aa17.06■□□□□ 0.32
PHF1-210ENST00000488767 MRC1P22897 1456 aa17.05■□□□□ 0.32
PHF1-210ENST00000488767 MSH5O43196 834 aa17.05■□□□□ 0.32
PHF1-210ENST00000488767 HTATSF1O43719 755 aaKnown RBP17.05■□□□□ 0.32
PHF1-210ENST00000488767 FLAD1Q8NFF5 587 aa17.05■□□□□ 0.32
PHF1-210ENST00000488767 C5P01031 1676 aa17.04■□□□□ 0.32
PHF1-210ENST00000488767 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
PHF1-210ENST00000488767 PPP1R1BQ9UD71 204 aaPredicted RBP17.04■□□□□ 0.32
PHF1-210ENST00000488767 LRP5O75197 1615 aa17.03■□□□□ 0.32
PHF1-210ENST00000488767 ZBTB7AO95365 584 aa17.02■□□□□ 0.32
PHF1-210ENST00000488767 IL17REQ8NFR9 667 aa17.02■□□□□ 0.32
PHF1-210ENST00000488767 SLC16A10Q8TF71 515 aa17.02■□□□□ 0.32
PHF1-210ENST00000488767 MTFR1LQ9H019 292 aa17.02■□□□□ 0.32
PHF1-210ENST00000488767 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
PHF1-210ENST00000488767 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
PHF1-210ENST00000488767 PLEKHF1Q96S99 279 aa17.01■□□□□ 0.31
PHF1-210ENST00000488767 CEMIPQ8WUJ3 1361 aa17.01■□□□□ 0.31
PHF1-210ENST00000488767 SRCAPQ6ZRS2 3230 aa17■□□□□ 0.31
PHF1-210ENST00000488767 PNPLA7Q6ZV29 1317 aa17■□□□□ 0.31
PHF1-210ENST00000488767 C4BP0C0L5 1744 aa17■□□□□ 0.31
PHF1-210ENST00000488767 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
PHF1-210ENST00000488767 MCM10Q7L590 875 aa17■□□□□ 0.31
PHF1-210ENST00000488767 LINC00116Q8NCU8 138 aa17■□□□□ 0.31
PHF1-210ENST00000488767 BTBD11A6QL63 1104 aa16.99■□□□□ 0.31
PHF1-210ENST00000488767 GNPATO15228 680 aa16.99■□□□□ 0.31
PHF1-210ENST00000488767 SSFA2P28290 1259 aa16.99■□□□□ 0.31
PHF1-210ENST00000488767 SLC39A6Q13433 755 aa16.99■□□□□ 0.31
PHF1-210ENST00000488767 ITPK1Q13572 414 aa16.99■□□□□ 0.31
PHF1-210ENST00000488767 ZNF831Q5JPB2 1677 aa16.99■□□□□ 0.31
PHF1-210ENST00000488767 CASZ1Q86V15 1759 aa16.99■□□□□ 0.31
PHF1-210ENST00000488767 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
PHF1-210ENST00000488767 PHF14O94880 888 aa16.98■□□□□ 0.31
PHF1-210ENST00000488767 POLD1P28340 1107 aa16.98■□□□□ 0.31
PHF1-210ENST00000488767 RUNDC1Q96C34 613 aa16.98■□□□□ 0.31
PHF1-210ENST00000488767 PDGFDQ9GZP0 370 aaPredicted RBP16.98■□□□□ 0.31
PHF1-210ENST00000488767 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
PHF1-210ENST00000488767 RTCBQ9Y3I0 505 aaKnown RBP16.98■□□□□ 0.31
PHF1-210ENST00000488767 RC3H1Q5TC82 1133 aaKnown RBP16.97■□□□□ 0.31
PHF1-210ENST00000488767 ZNF790Q6PG37 636 aa16.97■□□□□ 0.31
PHF1-210ENST00000488767 VSIG10Q8N0Z9 540 aa16.97■□□□□ 0.31
PHF1-210ENST00000488767 TAF1LQ8IZX4 1826 aa16.97■□□□□ 0.31
PHF1-210ENST00000488767 CNTNAP4Q9C0A0 1308 aa16.96■□□□□ 0.31
PHF1-210ENST00000488767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.96■□□□□ 0.31
PHF1-210ENST00000488767 RIPK4P57078 832 aa16.96■□□□□ 0.31
PHF1-210ENST00000488767 PNISRQ8TF01 805 aaKnown RBP16.96■□□□□ 0.31
PHF1-210ENST00000488767 FMNL2Q96PY5 1086 aa16.96■□□□□ 0.31
PHF1-210ENST00000488767 TEX13AQ9BXU3 409 aaPredicted RBP16.96■□□□□ 0.31
PHF1-210ENST00000488767 ADAMTS8Q9UP79 889 aa16.96■□□□□ 0.31
PHF1-210ENST00000488767 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.3
PHF1-210ENST00000488767 STARD3NLO95772 234 aa16.95■□□□□ 0.3
PHF1-210ENST00000488767 ADRA2BP18089 450 aa16.95■□□□□ 0.3
PHF1-210ENST00000488767 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
PHF1-210ENST00000488767 TAF7Q15545 349 aaPredicted RBP16.95■□□□□ 0.3
PHF1-210ENST00000488767 COL23A1Q86Y22 540 aaPredicted RBP16.95■□□□□ 0.3
PHF1-210ENST00000488767 CCDC146Q8IYE0 955 aa16.95■□□□□ 0.3
PHF1-210ENST00000488767 SLC4A9Q96Q91 983 aa16.95■□□□□ 0.3
PHF1-210ENST00000488767 MRS2Q9HD23 443 aa16.95■□□□□ 0.3
PHF1-210ENST00000488767 TRAPPC3LQ5T215 181 aa16.94■□□□□ 0.3
PHF1-210ENST00000488767 TMPOP42166 694 aaKnown RBP16.93■□□□□ 0.3
PHF1-210ENST00000488767 CRKLP46109 303 aaKnown RBP16.93■□□□□ 0.3
PHF1-210ENST00000488767 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
PHF1-210ENST00000488767 DNAJC10Q8IXB1 793 aa16.93■□□□□ 0.3
PHF1-210ENST00000488767 KCPQ6ZWJ8 1503 aa16.92■□□□□ 0.3
PHF1-210ENST00000488767 TUBGCP6Q96RT7 1819 aa16.92■□□□□ 0.3
PHF1-210ENST00000488767 RPS6KA4O75676 772 aa16.92■□□□□ 0.3
PHF1-210ENST00000488767 RFC4P35249 363 aa16.92■□□□□ 0.3
PHF1-210ENST00000488767 NEUROD2Q15784 382 aa16.92■□□□□ 0.3
PHF1-210ENST00000488767 ZNF496Q96IT1 587 aaPredicted RBP16.92■□□□□ 0.3
PHF1-210ENST00000488767 CCDC87Q9NVE4 849 aa16.92■□□□□ 0.3
PHF1-210ENST00000488767 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
PHF1-210ENST00000488767 HEG1Q9ULI3 1381 aa16.91■□□□□ 0.3
PHF1-210ENST00000488767 ARXQ96QS3 562 aa16.91■□□□□ 0.3
PHF1-210ENST00000488767 SIPA1L3O60292 1781 aaPredicted RBP16.91■□□□□ 0.3
PHF1-210ENST00000488767 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
PHF1-210ENST00000488767 CYP19A1P11511 503 aaPredicted RBP16.9■□□□□ 0.3
PHF1-210ENST00000488767 PTGER2P43116 358 aa16.9■□□□□ 0.3
PHF1-210ENST00000488767 RRP7AQ9Y3A4 280 aaKnown RBP16.9■□□□□ 0.3
PHF1-210ENST00000488767 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.3
PHF1-210ENST00000488767 UBR3Q6ZT12 1888 aa16.89■□□□□ 0.29
PHF1-210ENST00000488767 MSL1Q68DK7 614 aa16.89■□□□□ 0.29
PHF1-210ENST00000488767 TJP1Q07157 1748 aa16.89■□□□□ 0.29
PHF1-210ENST00000488767 DCAF8L1A6NGE4 600 aa16.88■□□□□ 0.29
PHF1-210ENST00000488767 SNRPA1P09661 255 aaKnown RBP16.88■□□□□ 0.29
PHF1-210ENST00000488767 CALD1Q05682 793 aaKnown RBP16.88■□□□□ 0.29
PHF1-210ENST00000488767 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
PHF1-210ENST00000488767 DLG5Q8TDM6 1919 aa16.88■□□□□ 0.29
PHF1-210ENST00000488767 ZPR1O75312 459 aa16.87■□□□□ 0.29
PHF1-210ENST00000488767 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
PHF1-210ENST00000488767 ARHGEF1Q92888 912 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms