RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 FER1L4A9Z1Z3 1794 aa15.65■□□□□ 0.1
CLIC4-202ENST00000488683 LRRC37A3O60309 1634 aa15.65■□□□□ 0.1
CLIC4-202ENST00000488683 FSD2A1L4K1 749 aa15.65■□□□□ 0.1
CLIC4-202ENST00000488683 FOXD4L6Q3SYB3 417 aaPredicted RBP15.65■□□□□ 0.1
CLIC4-202ENST00000488683 TPRNQ4KMQ1 711 aa15.65■□□□□ 0.1
CLIC4-202ENST00000488683 FOXD4L3Q6VB84 417 aaPredicted RBP15.65■□□□□ 0.1
CLIC4-202ENST00000488683 RILPL2Q969X0 211 aa15.65■□□□□ 0.1
CLIC4-202ENST00000488683 HOXC9P31274 260 aa15.64■□□□□ 0.09
CLIC4-202ENST00000488683 FLIIQ13045 1269 aa15.64■□□□□ 0.09
CLIC4-202ENST00000488683 FAM208AQ9UK61 1670 aaKnown RBP15.64■□□□□ 0.09
CLIC4-202ENST00000488683 KCNQ3O43525 872 aa15.64■□□□□ 0.09
CLIC4-202ENST00000488683 NCLP19338 710 aaKnown RBP15.64■□□□□ 0.09
CLIC4-202ENST00000488683 UNC5CLQ8IV45 518 aa15.64■□□□□ 0.09
CLIC4-202ENST00000488683 LRRFIP2Q9Y608 721 aaKnown RBP15.63■□□□□ 0.09
CLIC4-202ENST00000488683 LGR6Q9HBX8 967 aa15.63■□□□□ 0.09
CLIC4-202ENST00000488683 L1TD1Q5T7N2 865 aaKnown RBP15.62■□□□□ 0.09
CLIC4-202ENST00000488683 MCTP1Q6DN14 999 aa15.62■□□□□ 0.09
CLIC4-202ENST00000488683 LRRC59Q96AG4 307 aaKnown RBP15.62■□□□□ 0.09
CLIC4-202ENST00000488683 IL25Q9H293 177 aa15.62■□□□□ 0.09
CLIC4-202ENST00000488683 CIZ1Q9ULV3 898 aaPredicted RBP15.62■□□□□ 0.09
CLIC4-202ENST00000488683 DDX11L8A8MPP1 907 aa15.62■□□□□ 0.09
CLIC4-202ENST00000488683 TRIM6-TRIM34B2RNG4 842 aa15.62■□□□□ 0.09
CLIC4-202ENST00000488683 PDE1AP54750 535 aa15.62■□□□□ 0.09
CLIC4-202ENST00000488683 NUTM1Q86Y26 1132 aa15.62■□□□□ 0.09
CLIC4-202ENST00000488683 STK31Q9BXU1 1019 aa15.62■□□□□ 0.09
CLIC4-202ENST00000488683 PALD1Q9ULE6 856 aa15.62■□□□□ 0.09
CLIC4-202ENST00000488683 LARP6Q9BRS8 491 aaKnown RBP15.61■□□□□ 0.09
CLIC4-202ENST00000488683 GRPEL1Q9HAV7 217 aa15.61■□□□□ 0.09
CLIC4-202ENST00000488683 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
CLIC4-202ENST00000488683 CCT4P50991 539 aaKnown RBP15.6■□□□□ 0.09
CLIC4-202ENST00000488683 THEMISQ8N1K5 641 aaPredicted RBP15.6■□□□□ 0.09
CLIC4-202ENST00000488683 LMOD2Q6P5Q4 547 aa15.6■□□□□ 0.09
CLIC4-202ENST00000488683 GNAI2P04899 355 aa15.59■□□□□ 0.09
CLIC4-202ENST00000488683 BAG4O95429 457 aaKnown RBP15.59■□□□□ 0.09
CLIC4-202ENST00000488683 FAM43AQ8N2R8 423 aa15.59■□□□□ 0.09
CLIC4-202ENST00000488683 RABEP1Q15276 862 aa15.59■□□□□ 0.09
CLIC4-202ENST00000488683 GBP4Q96PP9 640 aa15.59■□□□□ 0.09
CLIC4-202ENST00000488683 TUBGCP6Q96RT7 1819 aa15.58■□□□□ 0.09
CLIC4-202ENST00000488683 ANKARQ7Z5J8 1434 aa15.58■□□□□ 0.08
CLIC4-202ENST00000488683 HMMRO75330 724 aa15.58■□□□□ 0.08
CLIC4-202ENST00000488683 RBM27Q9P2N5 1060 aaKnown RBP15.58■□□□□ 0.08
CLIC4-202ENST00000488683 LTN1O94822 1766 aa15.58■□□□□ 0.08
CLIC4-202ENST00000488683 NBPF6Q5VWK0 638 aa15.58■□□□□ 0.08
CLIC4-202ENST00000488683 NBPF4Q96M43 638 aa15.58■□□□□ 0.08
CLIC4-202ENST00000488683 UPF3BQ9BZI7 483 aaKnown RBP15.58■□□□□ 0.08
CLIC4-202ENST00000488683 MAP3K5Q99683 1374 aa15.58■□□□□ 0.08
CLIC4-202ENST00000488683 PRAMEF22A3QJZ6 481 aa15.57■□□□□ 0.08
CLIC4-202ENST00000488683 NEK4P51957 841 aa15.57■□□□□ 0.08
CLIC4-202ENST00000488683 DDX49Q9Y6V7 483 aaKnown RBP15.57■□□□□ 0.08
CLIC4-202ENST00000488683 ERBB4Q15303 1308 aa15.57■□□□□ 0.08
CLIC4-202ENST00000488683 USP54Q70EL1 1684 aa15.57■□□□□ 0.08
CLIC4-202ENST00000488683 HTATSF1O43719 755 aaKnown RBP15.57■□□□□ 0.08
CLIC4-202ENST00000488683 HDGFL1Q5TGJ6 251 aa15.57■□□□□ 0.08
CLIC4-202ENST00000488683 CCDC30Q5VVM6 783 aa15.57■□□□□ 0.08
CLIC4-202ENST00000488683 MPRIPQ6WCQ1 1025 aa15.57■□□□□ 0.08
CLIC4-202ENST00000488683 USP44Q9H0E7 712 aa15.57■□□□□ 0.08
CLIC4-202ENST00000488683 ANO2Q9NQ90 1003 aa15.57■□□□□ 0.08
CLIC4-202ENST00000488683 SALL3Q9BXA9 1300 aa15.56■□□□□ 0.08
CLIC4-202ENST00000488683 NBPF7P0C2Y1 421 aaPredicted RBP15.56■□□□□ 0.08
CLIC4-202ENST00000488683 CACNA1FO60840 1977 aa15.56■□□□□ 0.08
CLIC4-202ENST00000488683 LRRCC1Q9C099 1032 aa15.56■□□□□ 0.08
CLIC4-202ENST00000488683 OSBPL3Q9H4L5 887 aa15.56■□□□□ 0.08
CLIC4-202ENST00000488683 ZDHHC9Q9Y397 364 aa15.56■□□□□ 0.08
CLIC4-202ENST00000488683 CAVIN1Q6NZI2 390 aaKnown RBP15.55■□□□□ 0.08
CLIC4-202ENST00000488683 NSFL1CQ9UNZ2 370 aaKnown RBP15.55■□□□□ 0.08
CLIC4-202ENST00000488683 ERC2O15083 957 aa15.55■□□□□ 0.08
CLIC4-202ENST00000488683 MX1P20591 662 aa15.55■□□□□ 0.08
CLIC4-202ENST00000488683 CHPF2Q9P2E5 772 aa15.55■□□□□ 0.08
CLIC4-202ENST00000488683 PRPF40AO75400 957 aaKnown RBP15.54■□□□□ 0.08
CLIC4-202ENST00000488683 ESCO1Q5FWF5 840 aa15.54■□□□□ 0.08
CLIC4-202ENST00000488683 TAF7Q15545 349 aaPredicted RBP15.54■□□□□ 0.08
CLIC4-202ENST00000488683 CASC1Q6TDU7 716 aa15.54■□□□□ 0.08
CLIC4-202ENST00000488683 RGPD2P0DJD1 1756 aa15.54■□□□□ 0.08
CLIC4-202ENST00000488683 N4BP2Q86UW6 1770 aaPredicted RBP15.54■□□□□ 0.08
CLIC4-202ENST00000488683 MRE11P49959 708 aa15.53■□□□□ 0.08
CLIC4-202ENST00000488683 ATP8B2P98198 1209 aa15.53■□□□□ 0.08
CLIC4-202ENST00000488683 DDX54Q8TDD1 881 aaKnown RBP15.53■□□□□ 0.08
CLIC4-202ENST00000488683 SURF6O75683 361 aaKnown RBP15.52■□□□□ 0.08
CLIC4-202ENST00000488683 PPP1R42Q7Z4L9 355 aa15.52■□□□□ 0.08
CLIC4-202ENST00000488683 GNAI3P08754 354 aa15.52■□□□□ 0.08
CLIC4-202ENST00000488683 UBTFL1P0CB47 393 aaPredicted RBP15.52■□□□□ 0.08
CLIC4-202ENST00000488683 PHF8Q9UPP1 1060 aa15.52■□□□□ 0.08
CLIC4-202ENST00000488683 IBTKQ9P2D0 1353 aaPredicted RBP15.52■□□□□ 0.07
CLIC4-202ENST00000488683 PI4KAP2A4QPH2 592 aa15.52■□□□□ 0.07
CLIC4-202ENST00000488683 REC8O95072 547 aa15.52■□□□□ 0.07
CLIC4-202ENST00000488683 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.07
CLIC4-202ENST00000488683 PI4KAP1Q8N8J0 262 aa15.52■□□□□ 0.07
CLIC4-202ENST00000488683 ESYT1Q9BSJ8 1104 aa15.52■□□□□ 0.07
CLIC4-202ENST00000488683 GDPD2Q9HCC8 539 aa15.52■□□□□ 0.07
CLIC4-202ENST00000488683 SOS1Q07889 1333 aaPredicted RBP15.52■□□□□ 0.07
CLIC4-202ENST00000488683 CPA1P15085 419 aa15.51■□□□□ 0.07
CLIC4-202ENST00000488683 PROSER3Q2NL68 480 aa15.51■□□□□ 0.07
CLIC4-202ENST00000488683 ORAI2Q96SN7 254 aa15.51■□□□□ 0.07
CLIC4-202ENST00000488683 CHMLP26374 656 aa15.51■□□□□ 0.07
CLIC4-202ENST00000488683 CHD2O14647 1828 aaKnown RBP15.5■□□□□ 0.07
CLIC4-202ENST00000488683 NFAT5O94916 1531 aa15.5■□□□□ 0.07
CLIC4-202ENST00000488683 SRGAP3O43295 1099 aa15.5■□□□□ 0.07
CLIC4-202ENST00000488683 ST18O60284 1047 aa15.5■□□□□ 0.07
CLIC4-202ENST00000488683 CYP2E1P05181 493 aaPredicted RBP15.5■□□□□ 0.07
CLIC4-202ENST00000488683 CLEC17AQ6ZS10 378 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms