RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 NCAPD2Q15021 1401 aa13.06□□□□□ -0.32
PDPN-206ENST00000488631 ERVV-2B6SEH9 535 aa13.06□□□□□ -0.32
PDPN-206ENST00000488631 PROM2Q8N271 834 aa13.06□□□□□ -0.32
PDPN-206ENST00000488631 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
PDPN-206ENST00000488631 MAPK8IP3Q9UPT6 1336 aa13.06□□□□□ -0.32
PDPN-206ENST00000488631 PALLDQ8WX93 1383 aa13.06□□□□□ -0.32
PDPN-206ENST00000488631 TNS1Q9HBL0 1735 aaKnown RBP13.05□□□□□ -0.32
PDPN-206ENST00000488631 FCHSD2O94868 740 aa13.05□□□□□ -0.32
PDPN-206ENST00000488631 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
PDPN-206ENST00000488631 TEFQ10587 303 aa13.05□□□□□ -0.32
PDPN-206ENST00000488631 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
PDPN-206ENST00000488631 EP400Q96L91 3159 aa13.05□□□□□ -0.32
PDPN-206ENST00000488631 KDRP35968 1356 aa13.05□□□□□ -0.32
PDPN-206ENST00000488631 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
PDPN-206ENST00000488631 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
PDPN-206ENST00000488631 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
PDPN-206ENST00000488631 PPP1R1BQ9UD71 204 aaPredicted RBP13.04□□□□□ -0.32
PDPN-206ENST00000488631 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
PDPN-206ENST00000488631 NHSQ6T4R5 1651 aa13.03□□□□□ -0.32
PDPN-206ENST00000488631 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
PDPN-206ENST00000488631 PHACTR3Q96KR7 559 aa13.03□□□□□ -0.32
PDPN-206ENST00000488631 AK7Q96M32 723 aa13.03□□□□□ -0.32
PDPN-206ENST00000488631 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
PDPN-206ENST00000488631 PRKRIP1Q9H875 184 aaPredicted RBP13.03□□□□□ -0.32
PDPN-206ENST00000488631 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
PDPN-206ENST00000488631 PLEKHG2Q9H7P9 1386 aa13.03□□□□□ -0.32
PDPN-206ENST00000488631 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.33
PDPN-206ENST00000488631 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
PDPN-206ENST00000488631 LGR6Q9HBX8 967 aa13.02□□□□□ -0.33
PDPN-206ENST00000488631 LRRC4BQ9NT99 713 aa13.02□□□□□ -0.33
PDPN-206ENST00000488631 LOC102724428A0A0B4J2F2 783 aa13.01□□□□□ -0.33
PDPN-206ENST00000488631 ZBTB7AO95365 584 aa13.01□□□□□ -0.33
PDPN-206ENST00000488631 SIK1P57059 783 aa13.01□□□□□ -0.33
PDPN-206ENST00000488631 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
PDPN-206ENST00000488631 COL3A1P02461 1466 aaPredicted RBP13.01□□□□□ -0.33
PDPN-206ENST00000488631 DOT1LQ8TEK3 1739 aa13.01□□□□□ -0.33
PDPN-206ENST00000488631 MAP3K5Q99683 1374 aa13□□□□□ -0.33
PDPN-206ENST00000488631 PHF14O94880 888 aa13□□□□□ -0.33
PDPN-206ENST00000488631 SLC52A2Q9HAB3 445 aa13□□□□□ -0.33
PDPN-206ENST00000488631 SBF2Q86WG5 1849 aa12.99□□□□□ -0.33
PDPN-206ENST00000488631 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
PDPN-206ENST00000488631 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
PDPN-206ENST00000488631 SPON1Q9HCB6 807 aa12.99□□□□□ -0.33
PDPN-206ENST00000488631 BTAF1O14981 1849 aa12.99□□□□□ -0.33
PDPN-206ENST00000488631 PKD1L3Q7Z443 1732 aa12.99□□□□□ -0.33
PDPN-206ENST00000488631 KDM6AO15550 1401 aaPredicted RBP12.98□□□□□ -0.33
PDPN-206ENST00000488631 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
PDPN-206ENST00000488631 SLC39A6Q13433 755 aa12.98□□□□□ -0.33
PDPN-206ENST00000488631 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
PDPN-206ENST00000488631 MCM10Q7L590 875 aa12.98□□□□□ -0.33
PDPN-206ENST00000488631 SHANK3Q9BYB0 1731 aa12.97□□□□□ -0.33
PDPN-206ENST00000488631 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
PDPN-206ENST00000488631 GNPATO15228 680 aa12.97□□□□□ -0.33
PDPN-206ENST00000488631 DCTN1Q14203 1278 aa12.97□□□□□ -0.33
PDPN-206ENST00000488631 KLHL34Q8N239 644 aa12.97□□□□□ -0.33
PDPN-206ENST00000488631 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
PDPN-206ENST00000488631 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
PDPN-206ENST00000488631 MRS2Q9HD23 443 aa12.96□□□□□ -0.33
PDPN-206ENST00000488631 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
PDPN-206ENST00000488631 POLD1P28340 1107 aa12.95□□□□□ -0.34
PDPN-206ENST00000488631 RIPK4P57078 832 aa12.95□□□□□ -0.34
PDPN-206ENST00000488631 NPM2Q86SE8 214 aaKnown RBP12.95□□□□□ -0.34
PDPN-206ENST00000488631 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
PDPN-206ENST00000488631 FLAD1Q8NFF5 587 aa12.95□□□□□ -0.34
PDPN-206ENST00000488631 ARXQ96QS3 562 aa12.95□□□□□ -0.34
PDPN-206ENST00000488631 PDGFDQ9GZP0 370 aaPredicted RBP12.95□□□□□ -0.34
PDPN-206ENST00000488631 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
PDPN-206ENST00000488631 ITPK1Q13572 414 aa12.94□□□□□ -0.34
PDPN-206ENST00000488631 ADAMTS8Q9UP79 889 aa12.94□□□□□ -0.34
PDPN-206ENST00000488631 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
PDPN-206ENST00000488631 NUP188Q5SRE5 1749 aa12.93□□□□□ -0.34
PDPN-206ENST00000488631 HTATSF1O43719 755 aaKnown RBP12.93□□□□□ -0.34
PDPN-206ENST00000488631 LMOD3Q0VAK6 560 aa12.93□□□□□ -0.34
PDPN-206ENST00000488631 MSL1Q68DK7 614 aa12.93□□□□□ -0.34
PDPN-206ENST00000488631 RUNDC1Q96C34 613 aa12.93□□□□□ -0.34
PDPN-206ENST00000488631 MTFR1LQ9H019 292 aa12.93□□□□□ -0.34
PDPN-206ENST00000488631 ZNF330Q9Y3S2 320 aaPredicted RBP12.93□□□□□ -0.34
PDPN-206ENST00000488631 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
PDPN-206ENST00000488631 RREB1Q92766 1687 aa12.93□□□□□ -0.34
PDPN-206ENST00000488631 PNPLA7Q6ZV29 1317 aa12.92□□□□□ -0.34
PDPN-206ENST00000488631 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.92□□□□□ -0.34
PDPN-206ENST00000488631 TRAPPC3LQ5T215 181 aa12.92□□□□□ -0.34
PDPN-206ENST00000488631 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
PDPN-206ENST00000488631 PLEKHF1Q96S99 279 aa12.92□□□□□ -0.34
PDPN-206ENST00000488631 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
PDPN-206ENST00000488631 RGPD3A6NKT7 1758 aaPredicted RBP12.92□□□□□ -0.34
PDPN-206ENST00000488631 RGPD4Q7Z3J3 1758 aa12.92□□□□□ -0.34
PDPN-206ENST00000488631 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
PDPN-206ENST00000488631 STARD3NLO95772 234 aa12.91□□□□□ -0.34
PDPN-206ENST00000488631 RFC4P35249 363 aa12.91□□□□□ -0.34
PDPN-206ENST00000488631 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
PDPN-206ENST00000488631 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
PDPN-206ENST00000488631 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
PDPN-206ENST00000488631 DNAJC10Q8IXB1 793 aa12.91□□□□□ -0.34
PDPN-206ENST00000488631 SLC16A10Q8TF71 515 aa12.91□□□□□ -0.34
PDPN-206ENST00000488631 FMNL2Q96PY5 1086 aa12.91□□□□□ -0.34
PDPN-206ENST00000488631 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
PDPN-206ENST00000488631 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
PDPN-206ENST00000488631 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
PDPN-206ENST00000488631 TMPOP42166 694 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms