RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 N4BP2Q86UW6 1770 aaPredicted RBP20.03■□□□□ 0.8
RAPGEF3-211ENST00000488250 CEP85Q6P2H3 762 aa20.03■□□□□ 0.8
RAPGEF3-211ENST00000488250 TBC1D32Q96NH3 1257 aa20.03■□□□□ 0.8
RAPGEF3-211ENST00000488250 PXDNLA1KZ92 1463 aa20.03■□□□□ 0.8
RAPGEF3-211ENST00000488250 ADAMTS7Q9UKP4 1686 aa20.03■□□□□ 0.8
RAPGEF3-211ENST00000488250 EIF4A1P60842 406 aaKnown RBP20.02■□□□□ 0.8
RAPGEF3-211ENST00000488250 BMP2KLQ5H9B9 411 aa20.02■□□□□ 0.8
RAPGEF3-211ENST00000488250 XIRP1Q702N8 1843 aaKnown RBP20.02■□□□□ 0.8
RAPGEF3-211ENST00000488250 COL18A1P39060 1754 aa20.02■□□□□ 0.8
RAPGEF3-211ENST00000488250 MEIS3Q99687 375 aa20.02■□□□□ 0.79
RAPGEF3-211ENST00000488250 RGPD5Q99666 1765 aa20.01■□□□□ 0.79
RAPGEF3-211ENST00000488250 C1orf141Q5JVX7 400 aa20.01■□□□□ 0.79
RAPGEF3-211ENST00000488250 CRYBG1Q9Y4K1 1723 aa20■□□□□ 0.79
RAPGEF3-211ENST00000488250 RNMTO43148 476 aaKnown RBP20■□□□□ 0.79
RAPGEF3-211ENST00000488250 TEFQ10587 303 aa20■□□□□ 0.79
RAPGEF3-211ENST00000488250 DAXXQ9UER7 740 aaPredicted RBP20■□□□□ 0.79
RAPGEF3-211ENST00000488250 SPATA31A3Q5VYP0 1347 aa19.99■□□□□ 0.79
RAPGEF3-211ENST00000488250 F6X3S4 739 aa19.99■□□□□ 0.79
RAPGEF3-211ENST00000488250 ZC3H6P61129 1189 aaKnown RBP19.99■□□□□ 0.79
RAPGEF3-211ENST00000488250 HDGFL1Q5TGJ6 251 aa19.99■□□□□ 0.79
RAPGEF3-211ENST00000488250 FKBP5Q13451 457 aaPredicted RBP19.98■□□□□ 0.79
RAPGEF3-211ENST00000488250 CPDO75976 1380 aa19.98■□□□□ 0.79
RAPGEF3-211ENST00000488250 SLC4A10Q6U841 1118 aa19.98■□□□□ 0.79
RAPGEF3-211ENST00000488250 DDX17Q92841 729 aaKnown RBP19.98■□□□□ 0.79
RAPGEF3-211ENST00000488250 MPRIPQ6WCQ1 1025 aa19.97■□□□□ 0.79
RAPGEF3-211ENST00000488250 SIPA1L3O60292 1781 aaPredicted RBP19.97■□□□□ 0.79
RAPGEF3-211ENST00000488250 BTBD11A6QL63 1104 aa19.96■□□□□ 0.79
RAPGEF3-211ENST00000488250 HMMRO75330 724 aa19.96■□□□□ 0.79
RAPGEF3-211ENST00000488250 PLEKHG5O94827 1062 aa19.96■□□□□ 0.79
RAPGEF3-211ENST00000488250 HEG1Q9ULI3 1381 aa19.96■□□□□ 0.79
RAPGEF3-211ENST00000488250 GNAI3P08754 354 aa19.96■□□□□ 0.79
RAPGEF3-211ENST00000488250 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.96■□□□□ 0.79
RAPGEF3-211ENST00000488250 GNAI2P04899 355 aa19.95■□□□□ 0.78
RAPGEF3-211ENST00000488250 BRINP3Q76B58 766 aa19.94■□□□□ 0.78
RAPGEF3-211ENST00000488250 NECTIN2Q92692 538 aa19.94■□□□□ 0.78
RAPGEF3-211ENST00000488250 BECN1Q14457 450 aa19.93■□□□□ 0.78
RAPGEF3-211ENST00000488250 RAPGEF4Q8WZA2 1011 aa19.93■□□□□ 0.78
RAPGEF3-211ENST00000488250 KCNQ3O43525 872 aa19.92■□□□□ 0.78
RAPGEF3-211ENST00000488250 PLEKHM2Q8IWE5 1019 aa19.92■□□□□ 0.78
RAPGEF3-211ENST00000488250 SLC4A3P48751 1232 aa19.92■□□□□ 0.78
RAPGEF3-211ENST00000488250 C22orf23Q9BZE7 217 aa19.92■□□□□ 0.78
RAPGEF3-211ENST00000488250 NLRP2Q9NX02 1062 aa19.91■□□□□ 0.78
RAPGEF3-211ENST00000488250 TATP17735 454 aaPredicted RBP19.9■□□□□ 0.78
RAPGEF3-211ENST00000488250 ZNF335Q9H4Z2 1342 aaPredicted RBP19.9■□□□□ 0.78
RAPGEF3-211ENST00000488250 PHAXQ9H814 394 aaKnown RBP19.9■□□□□ 0.78
RAPGEF3-211ENST00000488250 SPG7Q9UQ90 795 aa19.9■□□□□ 0.78
RAPGEF3-211ENST00000488250 SOS2Q07890 1332 aaPredicted RBP19.89■□□□□ 0.77
RAPGEF3-211ENST00000488250 MEGF6O75095 1541 aa19.89■□□□□ 0.77
RAPGEF3-211ENST00000488250 GIGYF1O75420 1035 aaPredicted RBP19.89■□□□□ 0.77
RAPGEF3-211ENST00000488250 MFAP1P55081 439 aaKnown RBP19.89■□□□□ 0.77
RAPGEF3-211ENST00000488250 CABLES1Q8TDN4 633 aa19.89■□□□□ 0.77
RAPGEF3-211ENST00000488250 CHPF2Q9P2E5 772 aa19.89■□□□□ 0.77
RAPGEF3-211ENST00000488250 SCN11AQ9UI33 1791 aa19.89■□□□□ 0.77
RAPGEF3-211ENST00000488250 EIF2S2P20042 333 aaKnown RBP19.88■□□□□ 0.77
RAPGEF3-211ENST00000488250 DBF4Q9UBU7 674 aaPredicted RBP19.88■□□□□ 0.77
RAPGEF3-211ENST00000488250 EIF5BO60841 1220 aaKnown RBP19.88■□□□□ 0.77
RAPGEF3-211ENST00000488250 RBM25P49756 843 aaKnown RBP19.88■□□□□ 0.77
RAPGEF3-211ENST00000488250 ATP8B2P98198 1209 aa19.88■□□□□ 0.77
RAPGEF3-211ENST00000488250 USP44Q9H0E7 712 aa19.88■□□□□ 0.77
RAPGEF3-211ENST00000488250 USP35Q9P2H5 1018 aa19.88■□□□□ 0.77
RAPGEF3-211ENST00000488250 PKD1L3Q7Z443 1732 aa19.88■□□□□ 0.77
RAPGEF3-211ENST00000488250 KDM6AO15550 1401 aaPredicted RBP19.87■□□□□ 0.77
RAPGEF3-211ENST00000488250 PHKG2P15735 406 aa19.87■□□□□ 0.77
RAPGEF3-211ENST00000488250 NBR1Q14596 966 aa19.87■□□□□ 0.77
RAPGEF3-211ENST00000488250 SLAIN2Q9P270 581 aa19.87■□□□□ 0.77
RAPGEF3-211ENST00000488250 TTC22Q5TAA0 569 aa19.86■□□□□ 0.77
RAPGEF3-211ENST00000488250 MRC1P22897 1456 aa19.86■□□□□ 0.77
RAPGEF3-211ENST00000488250 CSB-PGBD3P0DP91 1061 aa19.86■□□□□ 0.77
RAPGEF3-211ENST00000488250 GSPT1P15170 499 aaKnown RBP19.86■□□□□ 0.77
RAPGEF3-211ENST00000488250 SRCIN1Q9C0H9 1055 aa19.86■□□□□ 0.77
RAPGEF3-211ENST00000488250 CDC45O75419 566 aa19.85■□□□□ 0.77
RAPGEF3-211ENST00000488250 IFNL2Q8IZJ0 200 aa19.85■□□□□ 0.77
RAPGEF3-211ENST00000488250 DNAAF4Q8WXU2 420 aa19.85■□□□□ 0.77
RAPGEF3-211ENST00000488250 SLC52A2Q9HAB3 445 aa19.85■□□□□ 0.77
RAPGEF3-211ENST00000488250 UBTFL1P0CB47 393 aaPredicted RBP19.84■□□□□ 0.77
RAPGEF3-211ENST00000488250 CHRNA2Q15822 529 aa19.84■□□□□ 0.77
RAPGEF3-211ENST00000488250 TBC1D9Q6ZT07 1266 aa19.84■□□□□ 0.77
RAPGEF3-211ENST00000488250 OSBPL3Q9H4L5 887 aa19.84■□□□□ 0.77
RAPGEF3-211ENST00000488250 BEND3Q5T5X7 828 aa19.84■□□□□ 0.77
RAPGEF3-211ENST00000488250 C16orf71Q8IYS4 520 aaPredicted RBP19.84■□□□□ 0.77
RAPGEF3-211ENST00000488250 ADCY9O60503 1353 aa19.83■□□□□ 0.77
RAPGEF3-211ENST00000488250 LRRFIP2Q9Y608 721 aaKnown RBP19.83■□□□□ 0.77
RAPGEF3-211ENST00000488250 PI4KAP2A4QPH2 592 aa19.82■□□□□ 0.76
RAPGEF3-211ENST00000488250 PI4KAP1Q8N8J0 262 aa19.82■□□□□ 0.76
RAPGEF3-211ENST00000488250 LTBP4Q8N2S1 1624 aa19.82■□□□□ 0.76
RAPGEF3-211ENST00000488250 HSP90AB1P08238 724 aaKnown RBP19.82■□□□□ 0.76
RAPGEF3-211ENST00000488250 RTL5Q5HYW3 569 aaPredicted RBP19.82■□□□□ 0.76
RAPGEF3-211ENST00000488250 ZNF790Q6PG37 636 aa19.82■□□□□ 0.76
RAPGEF3-211ENST00000488250 DCAF5Q96JK2 942 aa19.82■□□□□ 0.76
RAPGEF3-211ENST00000488250 TBC1D2Q9BYX2 928 aa19.82■□□□□ 0.76
RAPGEF3-211ENST00000488250 HYPKQ9NX55 129 aa19.82■□□□□ 0.76
RAPGEF3-211ENST00000488250 IBTKQ9P2D0 1353 aaPredicted RBP19.81■□□□□ 0.76
RAPGEF3-211ENST00000488250 PNMA6EA0A0J9YXQ4 647 aa19.81■□□□□ 0.76
RAPGEF3-211ENST00000488250 SMARCA5O60264 1052 aaPredicted RBP19.81■□□□□ 0.76
RAPGEF3-211ENST00000488250 SSH3Q8TE77 659 aa19.81■□□□□ 0.76
RAPGEF3-211ENST00000488250 PARP4Q9UKK3 1724 aaKnown RBP19.81■□□□□ 0.76
RAPGEF3-211ENST00000488250 OTUD7AQ8TE49 926 aaPredicted RBP19.8■□□□□ 0.76
RAPGEF3-211ENST00000488250 LRRCC1Q9C099 1032 aa19.8■□□□□ 0.76
RAPGEF3-211ENST00000488250 WDR17Q8IZU2 1322 aa19.8■□□□□ 0.76
RAPGEF3-211ENST00000488250 ABCA3Q99758 1704 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms