RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 ARHGEF12Q9NZN5 1544 aa14□□□□□ -0.17
LDLRAP1-207ENST00000488127 SMARCA5O60264 1052 aaPredicted RBP13.99□□□□□ -0.17
LDLRAP1-207ENST00000488127 IL2RBP14784 551 aa13.99□□□□□ -0.17
LDLRAP1-207ENST00000488127 NOC3LQ8WTT2 800 aaKnown RBP13.99□□□□□ -0.17
LDLRAP1-207ENST00000488127 ALDH1L2Q3SY69 923 aa13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 CHD1LQ86WJ1 897 aa13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 RPAP2Q8IXW5 612 aaPredicted RBP13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 CCDC39Q9UFE4 941 aa13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 LRRFIP2Q9Y608 721 aaKnown RBP13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 RRP12Q5JTH9 1297 aaKnown RBP13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 ZNF652Q9Y2D9 606 aa13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 MAP3K2Q9Y2U5 619 aa13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 UGGT1Q9NYU2 1555 aa13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 CAVIN1Q6NZI2 390 aaKnown RBP13.98□□□□□ -0.17
LDLRAP1-207ENST00000488127 SNRPA1P09661 255 aaKnown RBP13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 C8orf58Q8NAV2 365 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 UBE2Q2Q8WVN8 375 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 HYPKQ9NX55 129 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 ARHGEF5Q12774 1597 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 METP08581 1390 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 IP6K1Q92551 441 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 MLH3Q9UHC1 1453 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 PARD3Q8TEW0 1356 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 ERICH2A1L162 156 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 GRPEL1Q9HAV7 217 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 NKTRP30414 1462 aaKnown RBP13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 VPS37CA5D8V6 355 aaPredicted RBP13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 IGHMBP2P38935 993 aaKnown RBP13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 METTL24Q5JXM2 366 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 TEX35Q5T0J7 233 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 GNL3LQ9NVN8 582 aaKnown RBP13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 TRPM2O94759 1503 aa13.97□□□□□ -0.17
LDLRAP1-207ENST00000488127 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.17
LDLRAP1-207ENST00000488127 UBE3BQ7Z3V4 1068 aa13.96□□□□□ -0.17
LDLRAP1-207ENST00000488127 CHPF2Q9P2E5 772 aa13.96□□□□□ -0.17
LDLRAP1-207ENST00000488127 ABCF2Q9UG63 623 aa13.96□□□□□ -0.17
LDLRAP1-207ENST00000488127 CREBRFQ8IUR6 639 aa13.96□□□□□ -0.18
LDLRAP1-207ENST00000488127 KDM6BO15054 1643 aa13.95□□□□□ -0.18
LDLRAP1-207ENST00000488127 AKAP4Q5JQC9 854 aa13.95□□□□□ -0.18
LDLRAP1-207ENST00000488127 AK7Q96M32 723 aa13.95□□□□□ -0.18
LDLRAP1-207ENST00000488127 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.95□□□□□ -0.18
LDLRAP1-207ENST00000488127 GPS2Q13227 327 aa13.95□□□□□ -0.18
LDLRAP1-207ENST00000488127 EIF2AK4Q9P2K8 1649 aaKnown RBP13.95□□□□□ -0.18
LDLRAP1-207ENST00000488127 NEK4P51957 841 aa13.95□□□□□ -0.18
LDLRAP1-207ENST00000488127 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
LDLRAP1-207ENST00000488127 CTDP1Q9Y5B0 961 aaPredicted RBP13.94□□□□□ -0.18
LDLRAP1-207ENST00000488127 IDH1O75874 414 aaKnown RBP13.94□□□□□ -0.18
LDLRAP1-207ENST00000488127 TPM3P06753 285 aa13.94□□□□□ -0.18
LDLRAP1-207ENST00000488127 ATP6V1AP38606 617 aa13.94□□□□□ -0.18
LDLRAP1-207ENST00000488127 TSPYL6Q8N831 410 aa13.94□□□□□ -0.18
LDLRAP1-207ENST00000488127 XAGE3Q8WTP9 111 aa13.94□□□□□ -0.18
LDLRAP1-207ENST00000488127 RBM5P52756 815 aaKnown RBP eCLIP13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 ANKRD13DQ6ZTN6 518 aa13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 CCDC8Q9H0W5 538 aaPredicted RBP13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 IFIT5Q13325 482 aaKnown RBP13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 TRIM29Q14134 588 aa13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 CHMP4CQ96CF2 233 aa13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 HMGN5P82970 282 aaKnown RBP13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 CWC27Q6UX04 472 aaKnown RBP13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 HOMER1Q86YM7 354 aa13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 SMC3Q9UQE7 1217 aa13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 POLR3AO14802 1390 aaPredicted RBP13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 MCM4P33991 863 aa13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 SETQ01105 290 aaPredicted RBP13.93□□□□□ -0.18
LDLRAP1-207ENST00000488127 BOLA2Q9H3K6 86 aa13.92□□□□□ -0.18
LDLRAP1-207ENST00000488127 RAI14Q9P0K7 980 aa13.92□□□□□ -0.18
LDLRAP1-207ENST00000488127 CCDC34Q96HJ3 373 aa13.92□□□□□ -0.18
LDLRAP1-207ENST00000488127 TEX13AQ9BXU3 409 aaPredicted RBP13.92□□□□□ -0.18
LDLRAP1-207ENST00000488127 LRP2BPQ9P2M1 347 aa13.92□□□□□ -0.18
LDLRAP1-207ENST00000488127 COL17A1Q9UMD9 1497 aaPredicted RBP13.92□□□□□ -0.18
LDLRAP1-207ENST00000488127 RFC4P35249 363 aa13.91□□□□□ -0.18
LDLRAP1-207ENST00000488127 ATP2B2Q01814 1243 aa13.91□□□□□ -0.18
LDLRAP1-207ENST00000488127 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
LDLRAP1-207ENST00000488127 WWC3Q9ULE0 1092 aa13.91□□□□□ -0.18
LDLRAP1-207ENST00000488127 PLEKHG3A1L390 1219 aa13.91□□□□□ -0.18
LDLRAP1-207ENST00000488127 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
LDLRAP1-207ENST00000488127 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.18
LDLRAP1-207ENST00000488127 CCDC66A2RUB6 948 aa13.9□□□□□ -0.18
LDLRAP1-207ENST00000488127 ANKIB1Q9P2G1 1089 aa13.9□□□□□ -0.18
LDLRAP1-207ENST00000488127 MAGI2Q86UL8 1455 aa13.9□□□□□ -0.18
LDLRAP1-207ENST00000488127 HSP90AB3PQ58FF7 597 aa13.9□□□□□ -0.18
LDLRAP1-207ENST00000488127 NBPF6Q5VWK0 638 aa13.9□□□□□ -0.18
LDLRAP1-207ENST00000488127 NBPF4Q96M43 638 aa13.9□□□□□ -0.18
LDLRAP1-207ENST00000488127 TNNQ9UQP3 1299 aa13.9□□□□□ -0.18
LDLRAP1-207ENST00000488127 UQCRHLA0A096LP55 91 aa13.9□□□□□ -0.18
LDLRAP1-207ENST00000488127 UQCRHP07919 91 aa13.9□□□□□ -0.18
LDLRAP1-207ENST00000488127 PRPF40AO75400 957 aaKnown RBP13.9□□□□□ -0.19
LDLRAP1-207ENST00000488127 MPNDQ8N594 471 aa13.9□□□□□ -0.19
LDLRAP1-207ENST00000488127 CFAP74Q9C0B2 1584 aa13.89□□□□□ -0.19
LDLRAP1-207ENST00000488127 FAM98CQ17RN3 349 aaKnown RBP13.89□□□□□ -0.19
LDLRAP1-207ENST00000488127 MEIS3Q99687 375 aa13.89□□□□□ -0.19
LDLRAP1-207ENST00000488127 IL16Q14005 1332 aa13.89□□□□□ -0.19
LDLRAP1-207ENST00000488127 BICD2Q8TD16 824 aa13.89□□□□□ -0.19
LDLRAP1-207ENST00000488127 IL13P35225 146 aa13.89□□□□□ -0.19
LDLRAP1-207ENST00000488127 ZMYND15Q9H091 742 aa13.89□□□□□ -0.19
LDLRAP1-207ENST00000488127 CWC25Q9NXE8 425 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms