RNA–Protein interactions for RNA: ENST00000487201.1

RHBDF1-210, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 1,708 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-210ENST00000487201 TXNRD1Q16881 649 aa29.7■■■□□ 2.34
RHBDF1-210ENST00000487201 MCM10Q7L590 875 aa29.69■■■□□ 2.34
RHBDF1-210ENST00000487201 TMPOP42166 694 aaKnown RBP29.68■■■□□ 2.34
RHBDF1-210ENST00000487201 DCTN1Q14203 1278 aa29.68■■■□□ 2.34
RHBDF1-210ENST00000487201 ATG3Q9NT62 314 aa29.68■■■□□ 2.34
RHBDF1-210ENST00000487201 PALLDQ8WX93 1383 aa29.68■■■□□ 2.34
RHBDF1-210ENST00000487201 MIER1Q8N108 512 aa29.68■■■□□ 2.34
RHBDF1-210ENST00000487201 PAPPAQ13219 1627 aa29.68■■■□□ 2.34
RHBDF1-210ENST00000487201 HTATSF1O43719 755 aaKnown RBP29.67■■■□□ 2.34
RHBDF1-210ENST00000487201 LRRC4BQ9NT99 713 aa29.66■■■□□ 2.34
RHBDF1-210ENST00000487201 RRP7AQ9Y3A4 280 aaKnown RBP29.66■■■□□ 2.34
RHBDF1-210ENST00000487201 CCER2I3L3R5 266 aa29.65■■■□□ 2.34
RHBDF1-210ENST00000487201 RIPK4P57078 832 aa29.64■■■□□ 2.34
RHBDF1-210ENST00000487201 RTF1Q92541 710 aaKnown RBP29.64■■■□□ 2.34
RHBDF1-210ENST00000487201 KCNQ4P56696 695 aa29.63■■■□□ 2.33
RHBDF1-210ENST00000487201 SMARCC1Q92922 1105 aaPredicted RBP29.62■■■□□ 2.33
RHBDF1-210ENST00000487201 APAF1O14727 1248 aa29.62■■■□□ 2.33
RHBDF1-210ENST00000487201 THUMPD2Q9BTF0 503 aaKnown RBP29.61■■■□□ 2.33
RHBDF1-210ENST00000487201 TAF1LQ8IZX4 1826 aa29.61■■■□□ 2.33
RHBDF1-210ENST00000487201 TEFQ10587 303 aa29.6■■■□□ 2.33
RHBDF1-210ENST00000487201 NEUROD2Q15784 382 aa29.6■■■□□ 2.33
RHBDF1-210ENST00000487201 SLC27A3Q5K4L6 730 aa29.6■■■□□ 2.33
RHBDF1-210ENST00000487201 FAM9BQ8IZU0 186 aa29.6■■■□□ 2.33
RHBDF1-210ENST00000487201 UBR2Q8IWV8 1755 aa29.6■■■□□ 2.33
RHBDF1-210ENST00000487201 TRIM35Q9UPQ4 493 aa29.59■■■□□ 2.33
RHBDF1-210ENST00000487201 SLC39A6Q13433 755 aa29.59■■■□□ 2.33
RHBDF1-210ENST00000487201 CCNL1Q9UK58 526 aaPredicted RBP29.59■■■□□ 2.33
RHBDF1-210ENST00000487201 SLC4A9Q96Q91 983 aa29.58■■■□□ 2.33
RHBDF1-210ENST00000487201 C5P01031 1676 aa29.58■■■□□ 2.33
RHBDF1-210ENST00000487201 LOC102724428A0A0B4J2F2 783 aa29.57■■■□□ 2.32
RHBDF1-210ENST00000487201 SIK1P57059 783 aa29.57■■■□□ 2.32
RHBDF1-210ENST00000487201 ANO8Q9HCE9 1232 aaPredicted RBP29.57■■■□□ 2.32
RHBDF1-210ENST00000487201 ZNF831Q5JPB2 1677 aa29.57■■■□□ 2.32
RHBDF1-210ENST00000487201 KCPQ6ZWJ8 1503 aa29.57■■■□□ 2.32
RHBDF1-210ENST00000487201 SRCAPQ6ZRS2 3230 aa29.57■■■□□ 2.32
RHBDF1-210ENST00000487201 SENP3-EIF4A1A0A087X0R7 540 aa29.54■■■□□ 2.32
RHBDF1-210ENST00000487201 PTCD1O75127 700 aaKnown RBP29.53■■■□□ 2.32
RHBDF1-210ENST00000487201 LMOD3Q0VAK6 560 aa29.53■■■□□ 2.32
RHBDF1-210ENST00000487201 ITPK1Q13572 414 aa29.52■■■□□ 2.32
RHBDF1-210ENST00000487201 ZNF790Q6PG37 636 aa29.52■■■□□ 2.32
RHBDF1-210ENST00000487201 CICQ96RK0 1608 aaPredicted RBP29.52■■■□□ 2.32
RHBDF1-210ENST00000487201 BTBD11A6QL63 1104 aa29.51■■■□□ 2.32
RHBDF1-210ENST00000487201 RBM42Q9BTD8 480 aaKnown RBP29.51■■■□□ 2.32
RHBDF1-210ENST00000487201 TJP1Q07157 1748 aa29.51■■■□□ 2.31
RHBDF1-210ENST00000487201 KDM3BQ7LBC6 1761 aa29.51■■■□□ 2.31
RHBDF1-210ENST00000487201 COL5A3P25940 1745 aaPredicted RBP29.51■■■□□ 2.31
RHBDF1-210ENST00000487201 KCNQ3O43525 872 aa29.51■■■□□ 2.31
RHBDF1-210ENST00000487201 TAF7Q15545 349 aaPredicted RBP29.51■■■□□ 2.31
RHBDF1-210ENST00000487201 ATP6V1AP38606 617 aa29.5■■■□□ 2.31
RHBDF1-210ENST00000487201 ZNF827Q17R98 1081 aa29.5■■■□□ 2.31
RHBDF1-210ENST00000487201 MIS18AQ9NYP9 233 aa29.49■■■□□ 2.31
RHBDF1-210ENST00000487201 C4BP0C0L5 1744 aa29.49■■■□□ 2.31
RHBDF1-210ENST00000487201 TUBGCP6Q96RT7 1819 aa29.49■■■□□ 2.31
RHBDF1-210ENST00000487201 LINC00116Q8NCU8 138 aa29.48■■■□□ 2.31
RHBDF1-210ENST00000487201 AKT1S1Q96B36 256 aa29.48■■■□□ 2.31
RHBDF1-210ENST00000487201 NBPF14Q5TI25 921 aa29.47■■■□□ 2.31
RHBDF1-210ENST00000487201 ZNF496Q96IT1 587 aaPredicted RBP29.47■■■□□ 2.31
RHBDF1-210ENST00000487201 MYH14Q7Z406 1995 aaKnown RBP29.46■■■□□ 2.31
RHBDF1-210ENST00000487201 R3HDM1Q15032 1099 aaKnown RBP29.45■■■□□ 2.31
RHBDF1-210ENST00000487201 SLC15A2Q16348 729 aa29.45■■■□□ 2.31
RHBDF1-210ENST00000487201 TTC5Q8N0Z6 440 aa29.45■■■□□ 2.31
RHBDF1-210ENST00000487201 PSDA5PKW4 1024 aaPredicted RBP29.44■■■□□ 2.3
RHBDF1-210ENST00000487201 STK32BQ9NY57 414 aa29.42■■■□□ 2.3
RHBDF1-210ENST00000487201 QSER1Q2KHR3 1735 aa29.42■■■□□ 2.3
RHBDF1-210ENST00000487201 UBR3Q6ZT12 1888 aa29.42■■■□□ 2.3
RHBDF1-210ENST00000487201 CCDC27Q2M243 656 aa29.42■■■□□ 2.3
RHBDF1-210ENST00000487201 NCBP3Q53F19 620 aaKnown RBP29.41■■■□□ 2.3
RHBDF1-210ENST00000487201 VSIG10Q8N0Z9 540 aa29.41■■■□□ 2.3
RHBDF1-210ENST00000487201 HEG1Q9ULI3 1381 aa29.41■■■□□ 2.3
RHBDF1-210ENST00000487201 WWC1Q8IX03 1113 aa29.4■■■□□ 2.3
RHBDF1-210ENST00000487201 DNAJC10Q8IXB1 793 aa29.4■■■□□ 2.3
RHBDF1-210ENST00000487201 AMIGO3Q86WK7 504 aa29.4■■■□□ 2.3
RHBDF1-210ENST00000487201 FMNL2Q96PY5 1086 aa29.4■■■□□ 2.3
RHBDF1-210ENST00000487201 CASZ1Q86V15 1759 aa29.39■■■□□ 2.29
RHBDF1-210ENST00000487201 CHL1O00533 1208 aa29.38■■■□□ 2.29
RHBDF1-210ENST00000487201 PDGFDQ9GZP0 370 aaPredicted RBP29.38■■■□□ 2.29
RHBDF1-210ENST00000487201 BABAM1Q9NWV8 329 aa29.37■■■□□ 2.29
RHBDF1-210ENST00000487201 SALL2Q9Y467 1007 aaPredicted RBP29.37■■■□□ 2.29
RHBDF1-210ENST00000487201 TSPYL4Q9UJ04 414 aa29.37■■■□□ 2.29
RHBDF1-210ENST00000487201 ZNF853P0CG23 659 aa29.36■■■□□ 2.29
RHBDF1-210ENST00000487201 TFCP2L1Q9NZI6 479 aa29.36■■■□□ 2.29
RHBDF1-210ENST00000487201 CNTNAP4Q9C0A0 1308 aa29.35■■■□□ 2.29
RHBDF1-210ENST00000487201 PRAMEF22A3QJZ6 481 aa29.35■■■□□ 2.29
RHBDF1-210ENST00000487201 CYP19A1P11511 503 aaPredicted RBP29.35■■■□□ 2.29
RHBDF1-210ENST00000487201 EIF4A1P60842 406 aaKnown RBP29.35■■■□□ 2.29
RHBDF1-210ENST00000487201 CFAP44Q96MT7 982 aa29.35■■■□□ 2.29
RHBDF1-210ENST00000487201 PNPLA7Q6ZV29 1317 aa29.35■■■□□ 2.29
RHBDF1-210ENST00000487201 HMGB2P26583 209 aaKnown RBP29.34■■■□□ 2.29
RHBDF1-210ENST00000487201 CRKLP46109 303 aaKnown RBP29.34■■■□□ 2.29
RHBDF1-210ENST00000487201 SMIM5Q71RC9 77 aa29.34■■■□□ 2.29
RHBDF1-210ENST00000487201 RC3H1Q5TC82 1133 aaKnown RBP29.33■■■□□ 2.29
RHBDF1-210ENST00000487201 AK7Q96M32 723 aa29.33■■■□□ 2.29
RHBDF1-210ENST00000487201 LAS1LQ9Y4W2 734 aaKnown RBP29.33■■■□□ 2.29
RHBDF1-210ENST00000487201 INTS5Q6P9B9 1019 aaKnown RBP29.32■■■□□ 2.28
RHBDF1-210ENST00000487201 IFT57Q9NWB7 429 aa29.31■■■□□ 2.28
RHBDF1-210ENST00000487201 GNPATO15228 680 aa29.31■■■□□ 2.28
RHBDF1-210ENST00000487201 CALD1Q05682 793 aaKnown RBP29.31■■■□□ 2.28
RHBDF1-210ENST00000487201 MBIPQ9NS73 344 aa29.31■■■□□ 2.28
RHBDF1-210ENST00000487201 LAMB4A4D0S4 1761 aa29.3■■■□□ 2.28
RHBDF1-210ENST00000487201 SNRPA1P09661 255 aaKnown RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms