RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 PURBQ96QR8 312 aaKnown RBP9.66□□□□□ -0.86
SMARCAL1-212ENST00000486983 EVA1BQ9NVM1 165 aa9.66□□□□□ -0.86
SMARCAL1-212ENST00000486983 ASXL2Q76L83 1435 aa9.65□□□□□ -0.86
SMARCAL1-212ENST00000486983 DCAF11Q8TEB1 546 aa9.65□□□□□ -0.86
SMARCAL1-212ENST00000486983 ADGRL1O94910 1474 aa9.65□□□□□ -0.87
SMARCAL1-212ENST00000486983 ADH1CP00326 375 aa9.64□□□□□ -0.87
SMARCAL1-212ENST00000486983 VSIG8P0DPA2 414 aa9.64□□□□□ -0.87
SMARCAL1-212ENST00000486983 KCNH2Q12809 1159 aa9.64□□□□□ -0.87
SMARCAL1-212ENST00000486983 LMTK2Q8IWU2 1503 aa9.64□□□□□ -0.87
SMARCAL1-212ENST00000486983 COL17A1Q9UMD9 1497 aaPredicted RBP9.64□□□□□ -0.87
SMARCAL1-212ENST00000486983 ZBED9Q6R2W3 1325 aa9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 CEP152O94986 1710 aa9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 SPHKAPQ2M3C7 1700 aa9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 PLEKHG3A1L390 1219 aa9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 NEFLP07196 543 aa9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 VARSP26640 1264 aaKnown RBP9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 WDR4P57081 412 aaKnown RBP9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 ZNF326Q5BKZ1 582 aaKnown RBP9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 MPNDQ8N594 471 aa9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 ZNF518AQ6AHZ1 1483 aa9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 MROH1Q8NDA8 1641 aa9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 MADDQ8WXG6 1647 aa9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 KANK1Q14678 1352 aa9.63□□□□□ -0.87
SMARCAL1-212ENST00000486983 TSPOAP1O95153 1857 aa9.62□□□□□ -0.87
SMARCAL1-212ENST00000486983 NDUFV2P19404 249 aa9.62□□□□□ -0.87
SMARCAL1-212ENST00000486983 HNRNPUQ00839 825 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMARCAL1-212ENST00000486983 SCARF1Q14162 830 aa9.62□□□□□ -0.87
SMARCAL1-212ENST00000486983 PRR7Q8TB68 274 aa9.62□□□□□ -0.87
SMARCAL1-212ENST00000486983 SPIRE2Q8WWL2 714 aa9.62□□□□□ -0.87
SMARCAL1-212ENST00000486983 SCAPERQ9BY12 1400 aa9.62□□□□□ -0.87
SMARCAL1-212ENST00000486983 ERICH6BQ5W0A0 696 aa9.61□□□□□ -0.87
SMARCAL1-212ENST00000486983 KLF16Q9BXK1 252 aaPredicted RBP9.61□□□□□ -0.87
SMARCAL1-212ENST00000486983 MRS2Q9HD23 443 aa9.61□□□□□ -0.87
SMARCAL1-212ENST00000486983 EFCAB6Q5THR3 1501 aa9.61□□□□□ -0.87
SMARCAL1-212ENST00000486983 ST20-MTHFSA0A0A6YYL1 179 aa9.6□□□□□ -0.87
SMARCAL1-212ENST00000486983 MOXD2PA6NHM9 499 aa9.6□□□□□ -0.87
SMARCAL1-212ENST00000486983 SLC24A1O60721 1099 aa9.6□□□□□ -0.87
SMARCAL1-212ENST00000486983 KRI1Q8N9T8 703 aaKnown RBP9.6□□□□□ -0.87
SMARCAL1-212ENST00000486983 ZMYM4Q5VZL5 1548 aa9.6□□□□□ -0.87
SMARCAL1-212ENST00000486983 CLTCL1P53675 1640 aa9.6□□□□□ -0.87
SMARCAL1-212ENST00000486983 MYOM2P54296 1465 aa9.59□□□□□ -0.87
SMARCAL1-212ENST00000486983 MLH3Q9UHC1 1453 aa9.59□□□□□ -0.87
SMARCAL1-212ENST00000486983 KIAA1210Q9ULL0 1709 aa9.59□□□□□ -0.87
SMARCAL1-212ENST00000486983 WASHC2CQ9Y4E1 1318 aa9.59□□□□□ -0.87
SMARCAL1-212ENST00000486983 POGZQ7Z3K3 1410 aa9.59□□□□□ -0.87
SMARCAL1-212ENST00000486983 IQGAP1P46940 1657 aa9.59□□□□□ -0.87
SMARCAL1-212ENST00000486983 RALBP1Q15311 655 aa9.59□□□□□ -0.87
SMARCAL1-212ENST00000486983 AFAP1Q8N556 730 aa9.59□□□□□ -0.87
SMARCAL1-212ENST00000486983 BRD4O60885 1362 aaPredicted RBP9.59□□□□□ -0.87
SMARCAL1-212ENST00000486983 INSRP06213 1382 aa9.59□□□□□ -0.87
SMARCAL1-212ENST00000486983 KIDINS220Q9ULH0 1771 aa9.58□□□□□ -0.88
SMARCAL1-212ENST00000486983 KDM2AQ9Y2K7 1162 aa9.58□□□□□ -0.88
SMARCAL1-212ENST00000486983 NEO1Q92859 1461 aa9.58□□□□□ -0.88
SMARCAL1-212ENST00000486983 DIP2BQ9P265 1576 aa9.58□□□□□ -0.88
SMARCAL1-212ENST00000486983 TULP1O00294 542 aaPredicted RBP9.57□□□□□ -0.88
SMARCAL1-212ENST00000486983 SSTR3P32745 418 aaPredicted RBP9.57□□□□□ -0.88
SMARCAL1-212ENST00000486983 MTMR2Q13614 643 aa9.57□□□□□ -0.88
SMARCAL1-212ENST00000486983 CCDC184Q52MB2 194 aa9.57□□□□□ -0.88
SMARCAL1-212ENST00000486983 DESI1Q6ICB0 168 aa9.57□□□□□ -0.88
SMARCAL1-212ENST00000486983 ZFAND3Q9H8U3 227 aa9.57□□□□□ -0.88
SMARCAL1-212ENST00000486983 LRPPRCP42704 1394 aaKnown RBP9.57□□□□□ -0.88
SMARCAL1-212ENST00000486983 HECW2Q9P2P5 1572 aa9.57□□□□□ -0.88
SMARCAL1-212ENST00000486983 MYBBP1AQ9BQG0 1328 aaKnown RBP9.56□□□□□ -0.88
SMARCAL1-212ENST00000486983 SCAF11Q99590 1463 aaKnown RBP9.56□□□□□ -0.88
SMARCAL1-212ENST00000486983 PARD3Q8TEW0 1356 aa9.56□□□□□ -0.88
SMARCAL1-212ENST00000486983 FAM174AQ8TBP5 190 aa9.56□□□□□ -0.88
SMARCAL1-212ENST00000486983 TESK2Q96S53 571 aa9.56□□□□□ -0.88
SMARCAL1-212ENST00000486983 ZIC2O95409 532 aaPredicted RBP9.55□□□□□ -0.88
SMARCAL1-212ENST00000486983 CD109Q6YHK3 1445 aa9.55□□□□□ -0.88
SMARCAL1-212ENST00000486983 SMG6Q86US8 1419 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-212ENST00000486983 PPRC1Q5VV67 1664 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-212ENST00000486983 FRMPD1Q5SYB0 1578 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 NRXN1Q9ULB1 1477 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 EIF3AQ14152 1382 aaKnown RBP9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 MAN1A2O60476 641 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 NR3C2P08235 984 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 GSK3AP49840 483 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 TMF1P82094 1093 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 SUZ12Q15022 739 aaKnown RBP9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 RGL3Q3MIN7 710 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 C6orf118Q5T5N4 469 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 FOXJ1Q92949 421 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 ITPKCQ96DU7 683 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 CDK15Q96Q40 435 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 ADGRB3O60242 1522 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 SYNMO15061 1565 aa9.54□□□□□ -0.88
SMARCAL1-212ENST00000486983 IFT172Q9UG01 1749 aa9.53□□□□□ -0.88
SMARCAL1-212ENST00000486983 MAP3K4Q9Y6R4 1608 aa9.53□□□□□ -0.88
SMARCAL1-212ENST00000486983 DISP3Q9P2K9 1392 aa9.53□□□□□ -0.88
SMARCAL1-212ENST00000486983 SPDYE5A6NIY4 337 aa9.53□□□□□ -0.88
SMARCAL1-212ENST00000486983 CTHP32929 405 aa9.53□□□□□ -0.88
SMARCAL1-212ENST00000486983 ARID5BQ14865 1188 aa9.53□□□□□ -0.88
SMARCAL1-212ENST00000486983 NBPF1Q3BBV0 1214 aa9.53□□□□□ -0.88
SMARCAL1-212ENST00000486983 FAM9BQ8IZU0 186 aa9.53□□□□□ -0.88
SMARCAL1-212ENST00000486983 PNISRQ8TF01 805 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-212ENST00000486983 PPFIA3O75145 1194 aa9.52□□□□□ -0.89
SMARCAL1-212ENST00000486983 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
SMARCAL1-212ENST00000486983 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
SMARCAL1-212ENST00000486983 NLRP13Q86W25 1043 aa9.52□□□□□ -0.89
SMARCAL1-212ENST00000486983 MAP10Q9P2G4 905 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms