RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
LINC00996-202ENST00000486954 EZH2Q15910 746 aaKnown RBP15.35■□□□□ 0.05
LINC00996-202ENST00000486954 CEMIPQ8WUJ3 1361 aa15.35■□□□□ 0.05
LINC00996-202ENST00000486954 MCM10Q7L590 875 aa15.34■□□□□ 0.05
LINC00996-202ENST00000486954 NFATC2IPQ8NCF5 419 aa15.34■□□□□ 0.05
LINC00996-202ENST00000486954 CAMKK2Q96RR4 588 aa15.34■□□□□ 0.05
LINC00996-202ENST00000486954 RRP7AQ9Y3A4 280 aaKnown RBP15.34■□□□□ 0.05
LINC00996-202ENST00000486954 LY75O60449 1722 aa15.34■□□□□ 0.05
LINC00996-202ENST00000486954 APAF1O14727 1248 aa15.33■□□□□ 0.04
LINC00996-202ENST00000486954 HMGB2P26583 209 aaKnown RBP15.33■□□□□ 0.04
LINC00996-202ENST00000486954 SLC27A3Q5K4L6 730 aa15.33■□□□□ 0.04
LINC00996-202ENST00000486954 TTC5Q8N0Z6 440 aa15.33■□□□□ 0.04
LINC00996-202ENST00000486954 IL17REQ8NFR9 667 aa15.33■□□□□ 0.04
LINC00996-202ENST00000486954 EP400Q96L91 3159 aa15.32■□□□□ 0.04
LINC00996-202ENST00000486954 NUP188Q5SRE5 1749 aa15.32■□□□□ 0.04
LINC00996-202ENST00000486954 SIPA1L3O60292 1781 aaPredicted RBP15.32■□□□□ 0.04
LINC00996-202ENST00000486954 DCTN1Q14203 1278 aa15.32■□□□□ 0.04
LINC00996-202ENST00000486954 TXNRD1Q16881 649 aa15.32■□□□□ 0.04
LINC00996-202ENST00000486954 PAPPAQ13219 1627 aa15.32■□□□□ 0.04
LINC00996-202ENST00000486954 CCNL1Q9UK58 526 aaPredicted RBP15.31■□□□□ 0.04
LINC00996-202ENST00000486954 ASAP1Q9ULH1 1129 aa15.31■□□□□ 0.04
LINC00996-202ENST00000486954 BTBD11A6QL63 1104 aa15.3■□□□□ 0.04
LINC00996-202ENST00000486954 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
LINC00996-202ENST00000486954 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
LINC00996-202ENST00000486954 CALD1Q05682 793 aaKnown RBP15.29■□□□□ 0.04
LINC00996-202ENST00000486954 NBPF14Q5TI25 921 aa15.29■□□□□ 0.04
LINC00996-202ENST00000486954 LOC102724428A0A0B4J2F2 783 aa15.28■□□□□ 0.04
LINC00996-202ENST00000486954 SIK1P57059 783 aa15.28■□□□□ 0.04
LINC00996-202ENST00000486954 TAF7Q15545 349 aaPredicted RBP15.28■□□□□ 0.04
LINC00996-202ENST00000486954 THUMPD2Q9BTF0 503 aaKnown RBP15.28■□□□□ 0.04
LINC00996-202ENST00000486954 PTCD1O75127 700 aaKnown RBP15.27■□□□□ 0.04
LINC00996-202ENST00000486954 ATP6V1AP38606 617 aa15.27■□□□□ 0.04
LINC00996-202ENST00000486954 SLC39A6Q13433 755 aa15.27■□□□□ 0.04
LINC00996-202ENST00000486954 ZNF790Q6PG37 636 aa15.27■□□□□ 0.04
LINC00996-202ENST00000486954 NGEFQ8N5V2 710 aa15.27■□□□□ 0.04
LINC00996-202ENST00000486954 C5P01031 1676 aa15.27■□□□□ 0.03
LINC00996-202ENST00000486954 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
LINC00996-202ENST00000486954 ZNF831Q5JPB2 1677 aa15.26■□□□□ 0.03
LINC00996-202ENST00000486954 NCBP3Q53F19 620 aaKnown RBP15.26■□□□□ 0.03
LINC00996-202ENST00000486954 STK32BQ9NY57 414 aa15.26■□□□□ 0.03
LINC00996-202ENST00000486954 TRIM35Q9UPQ4 493 aa15.26■□□□□ 0.03
LINC00996-202ENST00000486954 CCDC27Q2M243 656 aa15.25■□□□□ 0.03
LINC00996-202ENST00000486954 PROM2Q8N271 834 aa15.25■□□□□ 0.03
LINC00996-202ENST00000486954 FMNL2Q96PY5 1086 aa15.25■□□□□ 0.03
LINC00996-202ENST00000486954 TSPYL4Q9UJ04 414 aa15.25■□□□□ 0.03
LINC00996-202ENST00000486954 KCPQ6ZWJ8 1503 aa15.25■□□□□ 0.03
LINC00996-202ENST00000486954 KDM3BQ7LBC6 1761 aa15.25■□□□□ 0.03
LINC00996-202ENST00000486954 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
LINC00996-202ENST00000486954 TAF1LQ8IZX4 1826 aa15.24■□□□□ 0.03
LINC00996-202ENST00000486954 LRRC4BQ9NT99 713 aa15.24■□□□□ 0.03
LINC00996-202ENST00000486954 BABAM1Q9NWV8 329 aa15.24■□□□□ 0.03
LINC00996-202ENST00000486954 LAS1LQ9Y4W2 734 aaKnown RBP15.24■□□□□ 0.03
LINC00996-202ENST00000486954 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
LINC00996-202ENST00000486954 KCNQ4P56696 695 aa15.23■□□□□ 0.03
LINC00996-202ENST00000486954 AK7Q96M32 723 aa15.23■□□□□ 0.03
LINC00996-202ENST00000486954 SALL2Q9Y467 1007 aaPredicted RBP15.23■□□□□ 0.03
LINC00996-202ENST00000486954 C4BP0C0L5 1744 aa15.23■□□□□ 0.03
LINC00996-202ENST00000486954 HEG1Q9ULI3 1381 aa15.23■□□□□ 0.03
LINC00996-202ENST00000486954 VSIG10Q8N0Z9 540 aa15.22■□□□□ 0.03
LINC00996-202ENST00000486954 TJP1Q07157 1748 aa15.22■□□□□ 0.03
LINC00996-202ENST00000486954 COL5A3P25940 1745 aaPredicted RBP15.21■□□□□ 0.03
LINC00996-202ENST00000486954 GNAI1P63096 354 aa15.21■□□□□ 0.03
LINC00996-202ENST00000486954 WWC1Q8IX03 1113 aa15.21■□□□□ 0.03
LINC00996-202ENST00000486954 ZNF496Q96IT1 587 aaPredicted RBP15.21■□□□□ 0.03
LINC00996-202ENST00000486954 TEX13AQ9BXU3 409 aaPredicted RBP15.21■□□□□ 0.03
LINC00996-202ENST00000486954 ANO8Q9HCE9 1232 aaPredicted RBP15.21■□□□□ 0.03
LINC00996-202ENST00000486954 IFT57Q9NWB7 429 aa15.21■□□□□ 0.03
LINC00996-202ENST00000486954 ITPK1Q13572 414 aa15.2■□□□□ 0.02
LINC00996-202ENST00000486954 SLC15A2Q16348 729 aa15.2■□□□□ 0.02
LINC00996-202ENST00000486954 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
LINC00996-202ENST00000486954 MIS18AQ9NYP9 233 aa15.2■□□□□ 0.02
LINC00996-202ENST00000486954 CNTNAP4Q9C0A0 1308 aa15.19■□□□□ 0.02
LINC00996-202ENST00000486954 KCNQ3O43525 872 aa15.19■□□□□ 0.02
LINC00996-202ENST00000486954 R3HDM1Q15032 1099 aaKnown RBP15.19■□□□□ 0.02
LINC00996-202ENST00000486954 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
LINC00996-202ENST00000486954 LINC00116Q8NCU8 138 aa15.19■□□□□ 0.02
LINC00996-202ENST00000486954 SLC4A9Q96Q91 983 aa15.19■□□□□ 0.02
LINC00996-202ENST00000486954 TFCP2L1Q9NZI6 479 aa15.19■□□□□ 0.02
LINC00996-202ENST00000486954 LAMB4A4D0S4 1761 aa15.19■□□□□ 0.02
LINC00996-202ENST00000486954 IL16Q14005 1332 aa15.18■□□□□ 0.02
LINC00996-202ENST00000486954 QSER1Q2KHR3 1735 aa15.18■□□□□ 0.02
LINC00996-202ENST00000486954 CHL1O00533 1208 aa15.18■□□□□ 0.02
LINC00996-202ENST00000486954 STARD3NLO95772 234 aa15.18■□□□□ 0.02
LINC00996-202ENST00000486954 SNRPA1P09661 255 aaKnown RBP15.18■□□□□ 0.02
LINC00996-202ENST00000486954 ZNF827Q17R98 1081 aa15.18■□□□□ 0.02
LINC00996-202ENST00000486954 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
LINC00996-202ENST00000486954 PSDA5PKW4 1024 aaPredicted RBP15.17■□□□□ 0.02
LINC00996-202ENST00000486954 GNPATO15228 680 aa15.17■□□□□ 0.02
LINC00996-202ENST00000486954 EIF4A1P60842 406 aaKnown RBP15.17■□□□□ 0.02
LINC00996-202ENST00000486954 WDR63Q8IWG1 891 aa15.17■□□□□ 0.02
LINC00996-202ENST00000486954 TUBGCP6Q96RT7 1819 aa15.16■□□□□ 0.02
LINC00996-202ENST00000486954 CRKLP46109 303 aaKnown RBP15.16■□□□□ 0.02
LINC00996-202ENST00000486954 RC3H1Q5TC82 1133 aaKnown RBP15.16■□□□□ 0.02
LINC00996-202ENST00000486954 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
LINC00996-202ENST00000486954 FLAD1Q8NFF5 587 aa15.16■□□□□ 0.02
LINC00996-202ENST00000486954 MBIPQ9NS73 344 aa15.16■□□□□ 0.02
LINC00996-202ENST00000486954 UBR3Q6ZT12 1888 aa15.15■□□□□ 0.02
LINC00996-202ENST00000486954 SSFA2P28290 1259 aa15.15■□□□□ 0.02
LINC00996-202ENST00000486954 MYH16Q9H6N6 1097 aa15.15■□□□□ 0.02
LINC00996-202ENST00000486954 CCDC87Q9NVE4 849 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms