RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 NBPF14Q5TI25 921 aa17.55■□□□□ 0.4
SF1-216ENST00000486867 TJP1Q07157 1748 aa17.55■□□□□ 0.4
SF1-216ENST00000486867 MYH14Q7Z406 1995 aaKnown RBP17.54■□□□□ 0.4
SF1-216ENST00000486867 SLC52A2Q9HAB3 445 aa17.54■□□□□ 0.4
SF1-216ENST00000486867 LGR6Q9HBX8 967 aa17.54■□□□□ 0.4
SF1-216ENST00000486867 ATG3Q9NT62 314 aa17.54■□□□□ 0.4
SF1-216ENST00000486867 GNAT3A8MTJ3 354 aa17.53■□□□□ 0.4
SF1-216ENST00000486867 HMGB2P26583 209 aaKnown RBP17.53■□□□□ 0.4
SF1-216ENST00000486867 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
SF1-216ENST00000486867 CABP4P57796 275 aa17.52■□□□□ 0.4
SF1-216ENST00000486867 R3HDM1Q15032 1099 aaKnown RBP17.52■□□□□ 0.4
SF1-216ENST00000486867 IL17REQ8NFR9 667 aa17.52■□□□□ 0.4
SF1-216ENST00000486867 AKT1S1Q96B36 256 aa17.52■□□□□ 0.4
SF1-216ENST00000486867 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.4
SF1-216ENST00000486867 CCNL1Q9UK58 526 aaPredicted RBP17.52■□□□□ 0.4
SF1-216ENST00000486867 KCPQ6ZWJ8 1503 aa17.52■□□□□ 0.39
SF1-216ENST00000486867 HTATSF1O43719 755 aaKnown RBP17.51■□□□□ 0.39
SF1-216ENST00000486867 SLC15A2Q16348 729 aa17.51■□□□□ 0.39
SF1-216ENST00000486867 NFATC2IPQ8NCF5 419 aa17.51■□□□□ 0.39
SF1-216ENST00000486867 LOC102724428A0A0B4J2F2 783 aa17.5■□□□□ 0.39
SF1-216ENST00000486867 SIK1P57059 783 aa17.5■□□□□ 0.39
SF1-216ENST00000486867 KDM3BQ7LBC6 1761 aa17.5■□□□□ 0.39
SF1-216ENST00000486867 PSDA5PKW4 1024 aaPredicted RBP17.49■□□□□ 0.39
SF1-216ENST00000486867 ZNF827Q17R98 1081 aa17.49■□□□□ 0.39
SF1-216ENST00000486867 STK32BQ9NY57 414 aa17.49■□□□□ 0.39
SF1-216ENST00000486867 ANP32CO43423 234 aa17.48■□□□□ 0.39
SF1-216ENST00000486867 SLC4A9Q96Q91 983 aa17.48■□□□□ 0.39
SF1-216ENST00000486867 KCNQ4P56696 695 aa17.47■□□□□ 0.39
SF1-216ENST00000486867 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
SF1-216ENST00000486867 NEFMP07197 916 aa17.46■□□□□ 0.39
SF1-216ENST00000486867 CCDC184Q52MB2 194 aa17.46■□□□□ 0.39
SF1-216ENST00000486867 ADAMTS8Q9UP79 889 aa17.46■□□□□ 0.39
SF1-216ENST00000486867 ITPK1Q13572 414 aa17.45■□□□□ 0.38
SF1-216ENST00000486867 WDR43Q15061 677 aaKnown RBP eCLIP17.45■□□□□ 0.38
SF1-216ENST00000486867 MAPK8IP3Q9UPT6 1336 aa17.45■□□□□ 0.38
SF1-216ENST00000486867 C4AP0C0L4 1744 aa17.44■□□□□ 0.38
SF1-216ENST00000486867 SRCAPQ6ZRS2 3230 aa17.44■□□□□ 0.38
SF1-216ENST00000486867 TEFQ10587 303 aa17.43■□□□□ 0.38
SF1-216ENST00000486867 LINC00116Q8NCU8 138 aa17.43■□□□□ 0.38
SF1-216ENST00000486867 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
SF1-216ENST00000486867 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
SF1-216ENST00000486867 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
SF1-216ENST00000486867 TMPOP42166 694 aaKnown RBP17.42■□□□□ 0.38
SF1-216ENST00000486867 RC3H1Q5TC82 1133 aaKnown RBP17.42■□□□□ 0.38
SF1-216ENST00000486867 VSIG10Q8N0Z9 540 aa17.42■□□□□ 0.38
SF1-216ENST00000486867 PNISRQ8TF01 805 aaKnown RBP17.42■□□□□ 0.38
SF1-216ENST00000486867 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
SF1-216ENST00000486867 PDGFDQ9GZP0 370 aaPredicted RBP17.42■□□□□ 0.38
SF1-216ENST00000486867 LAMB4A4D0S4 1761 aa17.42■□□□□ 0.38
SF1-216ENST00000486867 CNTNAP4Q9C0A0 1308 aa17.42■□□□□ 0.38
SF1-216ENST00000486867 SLC39A6Q13433 755 aa17.41■□□□□ 0.38
SF1-216ENST00000486867 ZNF790Q6PG37 636 aa17.41■□□□□ 0.38
SF1-216ENST00000486867 MCM10Q7L590 875 aa17.41■□□□□ 0.38
SF1-216ENST00000486867 SLC16A10Q8TF71 515 aa17.4■□□□□ 0.38
SF1-216ENST00000486867 PTCD1O75127 700 aaKnown RBP17.39■□□□□ 0.37
SF1-216ENST00000486867 DCTN1Q14203 1278 aa17.39■□□□□ 0.37
SF1-216ENST00000486867 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
SF1-216ENST00000486867 TFCP2L1Q9NZI6 479 aa17.39■□□□□ 0.37
SF1-216ENST00000486867 AMIGO3Q86WK7 504 aa17.38■□□□□ 0.37
SF1-216ENST00000486867 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
SF1-216ENST00000486867 FLAD1Q8NFF5 587 aa17.38■□□□□ 0.37
SF1-216ENST00000486867 HEG1Q9ULI3 1381 aa17.38■□□□□ 0.37
SF1-216ENST00000486867 SSFA2P28290 1259 aa17.37■□□□□ 0.37
SF1-216ENST00000486867 RIPK4P57078 832 aa17.37■□□□□ 0.37
SF1-216ENST00000486867 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
SF1-216ENST00000486867 TAF7Q15545 349 aaPredicted RBP17.37■□□□□ 0.37
SF1-216ENST00000486867 SGIP1Q9BQI5 828 aa17.37■□□□□ 0.37
SF1-216ENST00000486867 MTFR1LQ9H019 292 aa17.37■□□□□ 0.37
SF1-216ENST00000486867 MRS2Q9HD23 443 aa17.37■□□□□ 0.37
SF1-216ENST00000486867 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
SF1-216ENST00000486867 COL23A1Q86Y22 540 aaPredicted RBP17.36■□□□□ 0.37
SF1-216ENST00000486867 ZNF496Q96IT1 587 aaPredicted RBP17.36■□□□□ 0.37
SF1-216ENST00000486867 AK7Q96M32 723 aa17.36■□□□□ 0.37
SF1-216ENST00000486867 SPON1Q9HCB6 807 aa17.36■□□□□ 0.37
SF1-216ENST00000486867 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
SF1-216ENST00000486867 CYP19A1P11511 503 aaPredicted RBP17.35■□□□□ 0.37
SF1-216ENST00000486867 PTGER2P43116 358 aa17.35■□□□□ 0.37
SF1-216ENST00000486867 TTC5Q8N0Z6 440 aa17.35■□□□□ 0.37
SF1-216ENST00000486867 BABAM1Q9NWV8 329 aa17.35■□□□□ 0.37
SF1-216ENST00000486867 KCNQ3O43525 872 aa17.34■□□□□ 0.37
SF1-216ENST00000486867 RPS6KA4O75676 772 aa17.34■□□□□ 0.37
SF1-216ENST00000486867 ADRA2BP18089 450 aa17.34■□□□□ 0.37
SF1-216ENST00000486867 CRKLP46109 303 aaKnown RBP17.34■□□□□ 0.37
SF1-216ENST00000486867 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
SF1-216ENST00000486867 DNAJC10Q8IXB1 793 aa17.34■□□□□ 0.37
SF1-216ENST00000486867 FMNL2Q96PY5 1086 aa17.34■□□□□ 0.37
SF1-216ENST00000486867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.36
SF1-216ENST00000486867 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.36
SF1-216ENST00000486867 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
SF1-216ENST00000486867 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.36
SF1-216ENST00000486867 GNPATO15228 680 aa17.32■□□□□ 0.36
SF1-216ENST00000486867 ZBTB7AO95365 584 aa17.32■□□□□ 0.36
SF1-216ENST00000486867 BCORQ6W2J9 1755 aa17.31■□□□□ 0.36
SF1-216ENST00000486867 APAF1O14727 1248 aa17.31■□□□□ 0.36
SF1-216ENST00000486867 CCDC87Q9NVE4 849 aa17.31■□□□□ 0.36
SF1-216ENST00000486867 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
SF1-216ENST00000486867 RTCBQ9Y3I0 505 aaKnown RBP17.31■□□□□ 0.36
SF1-216ENST00000486867 SCN7AQ01118 1682 aa17.3■□□□□ 0.36
SF1-216ENST00000486867 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
SF1-216ENST00000486867 KIF13BQ9NQT8 1826 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms