RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 C6orf132Q5T0Z8 1188 aa7.77□□□□□ -1.17
COPS3-208ENST00000486032 NUTM2AQ8IVF1 878 aaPredicted RBP7.77□□□□□ -1.17
COPS3-208ENST00000486032 ANKARQ7Z5J8 1434 aa7.77□□□□□ -1.17
COPS3-208ENST00000486032 ACEP12821 1306 aa7.77□□□□□ -1.17
COPS3-208ENST00000486032 WASHC2AQ641Q2 1341 aa7.77□□□□□ -1.17
COPS3-208ENST00000486032 ALS2Q96Q42 1657 aa7.76□□□□□ -1.17
COPS3-208ENST00000486032 CCDC7Q96M83 1385 aa7.76□□□□□ -1.17
COPS3-208ENST00000486032 LMOD2Q6P5Q4 547 aa7.76□□□□□ -1.17
COPS3-208ENST00000486032 POTEAQ6S8J7 498 aa7.76□□□□□ -1.17
COPS3-208ENST00000486032 HDGFL2Q7Z4V5 671 aaPredicted RBP7.76□□□□□ -1.17
COPS3-208ENST00000486032 DDX10Q13206 875 aaKnown RBP7.75□□□□□ -1.17
COPS3-208ENST00000486032 KRT28Q7Z3Y7 464 aa7.75□□□□□ -1.17
COPS3-208ENST00000486032 CABLES1Q8TDN4 633 aa7.75□□□□□ -1.17
COPS3-208ENST00000486032 AAASQ9NRG9 546 aa7.75□□□□□ -1.17
COPS3-208ENST00000486032 ITSN1Q15811 1721 aa7.75□□□□□ -1.17
COPS3-208ENST00000486032 MARF1Q9Y4F3 1742 aaKnown RBP7.75□□□□□ -1.17
COPS3-208ENST00000486032 PLEKHG3A1L390 1219 aa7.74□□□□□ -1.17
COPS3-208ENST00000486032 ST8SIA5O15466 376 aa7.74□□□□□ -1.17
COPS3-208ENST00000486032 NFX1Q12986 1120 aaKnown RBP7.74□□□□□ -1.17
COPS3-208ENST00000486032 NUTM2GQ5VZR2 741 aa7.74□□□□□ -1.17
COPS3-208ENST00000486032 SAMD7Q7Z3H4 446 aa7.74□□□□□ -1.17
COPS3-208ENST00000486032 ZNF598Q86UK7 904 aaKnown RBP7.74□□□□□ -1.17
COPS3-208ENST00000486032 PACS2Q86VP3 889 aa7.74□□□□□ -1.17
COPS3-208ENST00000486032 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.74□□□□□ -1.17
COPS3-208ENST00000486032 PANK3Q9H999 370 aa7.74□□□□□ -1.17
COPS3-208ENST00000486032 TERF2IPQ9NYB0 399 aa7.74□□□□□ -1.17
COPS3-208ENST00000486032 KTN1Q86UP2 1357 aaKnown RBP7.73□□□□□ -1.17
COPS3-208ENST00000486032 NRKQ7Z2Y5 1582 aa7.73□□□□□ -1.17
COPS3-208ENST00000486032 TNS3Q68CZ2 1445 aa7.73□□□□□ -1.17
COPS3-208ENST00000486032 ADAMTS2O95450 1211 aa7.73□□□□□ -1.17
COPS3-208ENST00000486032 PDE4AP27815 886 aa7.73□□□□□ -1.17
COPS3-208ENST00000486032 SPRYD7Q5W111 196 aa7.73□□□□□ -1.17
COPS3-208ENST00000486032 PUS7Q96PZ0 661 aaKnown RBP7.73□□□□□ -1.17
COPS3-208ENST00000486032 PHRF1Q9P1Y6 1649 aaKnown RBP7.73□□□□□ -1.17
COPS3-208ENST00000486032 CD163L1Q9NR16 1453 aa7.73□□□□□ -1.17
COPS3-208ENST00000486032 SPATA31A3Q5VYP0 1347 aa7.73□□□□□ -1.17
COPS3-208ENST00000486032 NPHP3Q7Z494 1330 aa7.73□□□□□ -1.17
COPS3-208ENST00000486032 A0A1W2PP64 1363 aa7.72□□□□□ -1.17
COPS3-208ENST00000486032 AKAP12Q02952 1782 aa7.72□□□□□ -1.17
COPS3-208ENST00000486032 SUZ12Q15022 739 aaKnown RBP7.72□□□□□ -1.17
COPS3-208ENST00000486032 PIK3C2AO00443 1686 aa7.72□□□□□ -1.17
COPS3-208ENST00000486032 NSD3Q9BZ95 1437 aa7.71□□□□□ -1.17
COPS3-208ENST00000486032 MYOM1P52179 1685 aa7.71□□□□□ -1.18
COPS3-208ENST00000486032 EPAS1Q99814 870 aa7.71□□□□□ -1.18
COPS3-208ENST00000486032 POLR3AO14802 1390 aaPredicted RBP7.71□□□□□ -1.18
COPS3-208ENST00000486032 ANKRD36BQ8N2N9 1353 aa7.71□□□□□ -1.18
COPS3-208ENST00000486032 NINLQ9Y2I6 1382 aa7.71□□□□□ -1.18
COPS3-208ENST00000486032 USP6P35125 1406 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 PLCH1Q4KWH8 1693 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 NRAPQ86VF7 1730 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 ZBTB7CA1YPR0 619 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 FAM181BA6NEQ2 426 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 RGL2O15211 777 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 HAP1P54257 671 aaPredicted RBP7.7□□□□□ -1.18
COPS3-208ENST00000486032 NME9Q86XW9 330 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 ABTB2Q8N961 1025 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 LRRC59Q96AG4 307 aaKnown RBP7.7□□□□□ -1.18
COPS3-208ENST00000486032 C8orf37Q96NL8 207 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 CARD14Q9BXL6 1004 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 GGNBP2Q9H3C7 697 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 KNSTRNQ9Y448 316 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 AFF2P51816 1311 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 SPATA31A6Q5VVP1 1343 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 TTC21BQ7Z4L5 1316 aa7.7□□□□□ -1.18
COPS3-208ENST00000486032 SSH2Q76I76 1423 aa7.69□□□□□ -1.18
COPS3-208ENST00000486032 MON2Q7Z3U7 1717 aa7.69□□□□□ -1.18
COPS3-208ENST00000486032 CC2D1BQ5T0F9 858 aaKnown RBP7.69□□□□□ -1.18
COPS3-208ENST00000486032 SBNO1A3KN83 1393 aa7.69□□□□□ -1.18
COPS3-208ENST00000486032 CPSF1Q10570 1443 aaKnown RBP7.69□□□□□ -1.18
COPS3-208ENST00000486032 BCL9LQ86UU0 1499 aa7.68□□□□□ -1.18
COPS3-208ENST00000486032 GLI3P10071 1580 aa7.68□□□□□ -1.18
COPS3-208ENST00000486032 TNNT2P45379 298 aaPredicted RBP7.68□□□□□ -1.18
COPS3-208ENST00000486032 APLP1P51693 650 aa7.68□□□□□ -1.18
COPS3-208ENST00000486032 EMID1Q96A84 441 aaPredicted RBP7.68□□□□□ -1.18
COPS3-208ENST00000486032 EDC4Q6P2E9 1401 aaKnown RBP7.68□□□□□ -1.18
COPS3-208ENST00000486032 TNFRSF10AO00220 468 aa7.67□□□□□ -1.18
COPS3-208ENST00000486032 GDF9O60383 454 aa7.67□□□□□ -1.18
COPS3-208ENST00000486032 ZNF697Q5TEC3 545 aa7.67□□□□□ -1.18
COPS3-208ENST00000486032 MEX3CQ5U5Q3 659 aaKnown RBP7.67□□□□□ -1.18
COPS3-208ENST00000486032 COG3Q96JB2 828 aa7.67□□□□□ -1.18
COPS3-208ENST00000486032 TSKSQ9UJT2 592 aa7.67□□□□□ -1.18
COPS3-208ENST00000486032 CGNL1Q0VF96 1302 aa7.67□□□□□ -1.18
COPS3-208ENST00000486032 TTC21AQ8NDW8 1320 aa7.67□□□□□ -1.18
COPS3-208ENST00000486032 RGS12O14924 1447 aa7.67□□□□□ -1.18
COPS3-208ENST00000486032 SLIT2O94813 1529 aa7.67□□□□□ -1.18
COPS3-208ENST00000486032 RNF223E7ERA6 249 aa7.66□□□□□ -1.18
COPS3-208ENST00000486032 FYB1O15117 783 aa7.66□□□□□ -1.18
COPS3-208ENST00000486032 COPS2P61201 443 aa7.66□□□□□ -1.18
COPS3-208ENST00000486032 MORC1Q86VD1 984 aa7.66□□□□□ -1.18
COPS3-208ENST00000486032 NLRP13Q86W25 1043 aa7.66□□□□□ -1.18
COPS3-208ENST00000486032 ARHGEF10O15013 1369 aa7.65□□□□□ -1.18
COPS3-208ENST00000486032 SLIT3O75094 1523 aa7.65□□□□□ -1.18
COPS3-208ENST00000486032 ATRNO75882 1429 aa7.65□□□□□ -1.18
COPS3-208ENST00000486032 FBLN1P23142 703 aa7.65□□□□□ -1.18
COPS3-208ENST00000486032 ZC3H6P61129 1189 aaKnown RBP7.65□□□□□ -1.18
COPS3-208ENST00000486032 CHRNA2Q15822 529 aa7.65□□□□□ -1.18
COPS3-208ENST00000486032 LMO7Q8WWI1 1683 aa7.65□□□□□ -1.18
COPS3-208ENST00000486032 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.65□□□□□ -1.18
COPS3-208ENST00000486032 GMPR2Q9P2T1 348 aaKnown RBP7.65□□□□□ -1.18
COPS3-208ENST00000486032 KIF20BQ96Q89 1820 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms