RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 CEMIPQ8WUJ3 1361 aa20.42■□□□□ 0.86
RPUSD3-217ENST00000485705 MRC1P22897 1456 aa20.42■□□□□ 0.86
RPUSD3-217ENST00000485705 SIPA1L3O60292 1781 aaPredicted RBP20.41■□□□□ 0.86
RPUSD3-217ENST00000485705 TRIM35Q9UPQ4 493 aa20.41■□□□□ 0.86
RPUSD3-217ENST00000485705 BAG6P46379 1132 aa20.4■□□□□ 0.86
RPUSD3-217ENST00000485705 ASAP1Q9ULH1 1129 aa20.4■□□□□ 0.86
RPUSD3-217ENST00000485705 TEFQ10587 303 aa20.38■□□□□ 0.85
RPUSD3-217ENST00000485705 EZH2Q15910 746 aaKnown RBP20.38■□□□□ 0.85
RPUSD3-217ENST00000485705 CAMKK2Q96RR4 588 aa20.38■□□□□ 0.85
RPUSD3-217ENST00000485705 ATG3Q9NT62 314 aa20.38■□□□□ 0.85
RPUSD3-217ENST00000485705 PLSCR1O15162 318 aa20.37■□□□□ 0.85
RPUSD3-217ENST00000485705 LY75O60449 1722 aa20.36■□□□□ 0.85
RPUSD3-217ENST00000485705 SLC39A6Q13433 755 aa20.36■□□□□ 0.85
RPUSD3-217ENST00000485705 PROM2Q8N271 834 aa20.36■□□□□ 0.85
RPUSD3-217ENST00000485705 SALL2Q9Y467 1007 aaPredicted RBP20.36■□□□□ 0.85
RPUSD3-217ENST00000485705 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
RPUSD3-217ENST00000485705 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
RPUSD3-217ENST00000485705 PALLDQ8WX93 1383 aa20.35■□□□□ 0.85
RPUSD3-217ENST00000485705 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
RPUSD3-217ENST00000485705 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
RPUSD3-217ENST00000485705 KCNQ4P56696 695 aa20.34■□□□□ 0.85
RPUSD3-217ENST00000485705 RREB1Q92766 1687 aa20.33■□□□□ 0.85
RPUSD3-217ENST00000485705 TXNRD1Q16881 649 aa20.33■□□□□ 0.85
RPUSD3-217ENST00000485705 SMARCC1Q92922 1105 aaPredicted RBP20.33■□□□□ 0.85
RPUSD3-217ENST00000485705 MIS18AQ9NYP9 233 aa20.33■□□□□ 0.85
RPUSD3-217ENST00000485705 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
RPUSD3-217ENST00000485705 KCNQ3O43525 872 aa20.32■□□□□ 0.84
RPUSD3-217ENST00000485705 TAF7Q15545 349 aaPredicted RBP20.32■□□□□ 0.84
RPUSD3-217ENST00000485705 LRRC4BQ9NT99 713 aa20.31■□□□□ 0.84
RPUSD3-217ENST00000485705 NUP188Q5SRE5 1749 aa20.3■□□□□ 0.84
RPUSD3-217ENST00000485705 PTCD1O75127 700 aaKnown RBP20.3■□□□□ 0.84
RPUSD3-217ENST00000485705 WWC1Q8IX03 1113 aa20.3■□□□□ 0.84
RPUSD3-217ENST00000485705 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
RPUSD3-217ENST00000485705 UBR2Q8IWV8 1755 aa20.3■□□□□ 0.84
RPUSD3-217ENST00000485705 SRCAPQ6ZRS2 3230 aa20.3■□□□□ 0.84
RPUSD3-217ENST00000485705 KCPQ6ZWJ8 1503 aa20.29■□□□□ 0.84
RPUSD3-217ENST00000485705 LOC102724428A0A0B4J2F2 783 aa20.29■□□□□ 0.84
RPUSD3-217ENST00000485705 SIK1P57059 783 aa20.29■□□□□ 0.84
RPUSD3-217ENST00000485705 CCDC27Q2M243 656 aa20.29■□□□□ 0.84
RPUSD3-217ENST00000485705 ZNF790Q6PG37 636 aa20.29■□□□□ 0.84
RPUSD3-217ENST00000485705 RBM42Q9BTD8 480 aaKnown RBP20.29■□□□□ 0.84
RPUSD3-217ENST00000485705 CCNL1Q9UK58 526 aaPredicted RBP20.29■□□□□ 0.84
RPUSD3-217ENST00000485705 KDM3BQ7LBC6 1761 aa20.29■□□□□ 0.84
RPUSD3-217ENST00000485705 TAF1LQ8IZX4 1826 aa20.28■□□□□ 0.84
RPUSD3-217ENST00000485705 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
RPUSD3-217ENST00000485705 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
RPUSD3-217ENST00000485705 ITPK1Q13572 414 aa20.26■□□□□ 0.83
RPUSD3-217ENST00000485705 SLC27A3Q5K4L6 730 aa20.26■□□□□ 0.83
RPUSD3-217ENST00000485705 TTC5Q8N0Z6 440 aa20.26■□□□□ 0.83
RPUSD3-217ENST00000485705 ZNF496Q96IT1 587 aaPredicted RBP20.26■□□□□ 0.83
RPUSD3-217ENST00000485705 ATP6V1AP38606 617 aa20.25■□□□□ 0.83
RPUSD3-217ENST00000485705 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
RPUSD3-217ENST00000485705 C5P01031 1676 aa20.24■□□□□ 0.83
RPUSD3-217ENST00000485705 CHL1O00533 1208 aa20.24■□□□□ 0.83
RPUSD3-217ENST00000485705 TJP1Q07157 1748 aa20.24■□□□□ 0.83
RPUSD3-217ENST00000485705 LINC00116Q8NCU8 138 aa20.23■□□□□ 0.83
RPUSD3-217ENST00000485705 ANO8Q9HCE9 1232 aaPredicted RBP20.23■□□□□ 0.83
RPUSD3-217ENST00000485705 MYH14Q7Z406 1995 aaKnown RBP20.23■□□□□ 0.83
RPUSD3-217ENST00000485705 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
RPUSD3-217ENST00000485705 ZNF853P0CG23 659 aa20.22■□□□□ 0.83
RPUSD3-217ENST00000485705 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
RPUSD3-217ENST00000485705 CFAP44Q96MT7 982 aa20.22■□□□□ 0.83
RPUSD3-217ENST00000485705 ZNF521Q96K83 1311 aa20.22■□□□□ 0.83
RPUSD3-217ENST00000485705 COL5A3P25940 1745 aaPredicted RBP20.22■□□□□ 0.83
RPUSD3-217ENST00000485705 HEG1Q9ULI3 1381 aa20.21■□□□□ 0.83
RPUSD3-217ENST00000485705 EIF4A1P60842 406 aaKnown RBP20.21■□□□□ 0.83
RPUSD3-217ENST00000485705 CALD1Q05682 793 aaKnown RBP20.21■□□□□ 0.83
RPUSD3-217ENST00000485705 DNAJC10Q8IXB1 793 aa20.21■□□□□ 0.83
RPUSD3-217ENST00000485705 FMNL2Q96PY5 1086 aa20.21■□□□□ 0.83
RPUSD3-217ENST00000485705 IFT57Q9NWB7 429 aa20.21■□□□□ 0.83
RPUSD3-217ENST00000485705 BABAM1Q9NWV8 329 aa20.21■□□□□ 0.83
RPUSD3-217ENST00000485705 PRAMEF22A3QJZ6 481 aa20.2■□□□□ 0.82
RPUSD3-217ENST00000485705 WDR63Q8IWG1 891 aa20.2■□□□□ 0.82
RPUSD3-217ENST00000485705 SPINK5Q9NQ38 1064 aaPredicted RBP20.2■□□□□ 0.82
RPUSD3-217ENST00000485705 MBIPQ9NS73 344 aa20.2■□□□□ 0.82
RPUSD3-217ENST00000485705 C4BP0C0L5 1744 aa20.19■□□□□ 0.82
RPUSD3-217ENST00000485705 GNAI1P63096 354 aa20.19■□□□□ 0.82
RPUSD3-217ENST00000485705 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
RPUSD3-217ENST00000485705 ZNF827Q17R98 1081 aa20.19■□□□□ 0.82
RPUSD3-217ENST00000485705 CICQ96RK0 1608 aaPredicted RBP20.19■□□□□ 0.82
RPUSD3-217ENST00000485705 KRT24Q2M2I5 525 aa20.18■□□□□ 0.82
RPUSD3-217ENST00000485705 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
RPUSD3-217ENST00000485705 IL16Q14005 1332 aa20.18■□□□□ 0.82
RPUSD3-217ENST00000485705 TUBGCP6Q96RT7 1819 aa20.18■□□□□ 0.82
RPUSD3-217ENST00000485705 TSR2Q969E8 191 aaKnown RBP20.17■□□□□ 0.82
RPUSD3-217ENST00000485705 AKT1S1Q96B36 256 aa20.17■□□□□ 0.82
RPUSD3-217ENST00000485705 NBPF14Q5TI25 921 aa20.16■□□□□ 0.82
RPUSD3-217ENST00000485705 USP16Q9Y5T5 823 aa20.16■□□□□ 0.82
RPUSD3-217ENST00000485705 GIGYF1O75420 1035 aaPredicted RBP20.15■□□□□ 0.82
RPUSD3-217ENST00000485705 SNRPA1P09661 255 aaKnown RBP20.15■□□□□ 0.82
RPUSD3-217ENST00000485705 CYP19A1P11511 503 aaPredicted RBP20.15■□□□□ 0.82
RPUSD3-217ENST00000485705 SLC15A2Q16348 729 aa20.15■□□□□ 0.82
RPUSD3-217ENST00000485705 SMIM5Q71RC9 77 aa20.15■□□□□ 0.82
RPUSD3-217ENST00000485705 AMIGO3Q86WK7 504 aa20.15■□□□□ 0.82
RPUSD3-217ENST00000485705 STK32BQ9NY57 414 aa20.15■□□□□ 0.82
RPUSD3-217ENST00000485705 UBR3Q6ZT12 1888 aa20.15■□□□□ 0.82
RPUSD3-217ENST00000485705 CRKLP46109 303 aaKnown RBP20.14■□□□□ 0.81
RPUSD3-217ENST00000485705 R3HDM1Q15032 1099 aaKnown RBP20.14■□□□□ 0.81
RPUSD3-217ENST00000485705 FANCIQ9NVI1 1328 aa20.13■□□□□ 0.81
RPUSD3-217ENST00000485705 PSDA5PKW4 1024 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms