RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 RREB1Q92766 1687 aa26.22■■□□□ 1.79
COL6A2-208ENST00000485591 APBA3O96018 575 aa26.21■■□□□ 1.79
COL6A2-208ENST00000485591 DCTN1Q14203 1278 aa26.21■■□□□ 1.79
COL6A2-208ENST00000485591 NEUROD2Q15784 382 aa26.21■■□□□ 1.79
COL6A2-208ENST00000485591 BAG6P46379 1132 aa26.2■■□□□ 1.78
COL6A2-208ENST00000485591 TEFQ10587 303 aa26.2■■□□□ 1.78
COL6A2-208ENST00000485591 NFATC2IPQ8NCF5 419 aa26.2■■□□□ 1.78
COL6A2-208ENST00000485591 TRIM35Q9UPQ4 493 aa26.19■■□□□ 1.78
COL6A2-208ENST00000485591 UBR2Q8IWV8 1755 aa26.19■■□□□ 1.78
COL6A2-208ENST00000485591 PLSCR1O15162 318 aa26.18■■□□□ 1.78
COL6A2-208ENST00000485591 NCBP3Q53F19 620 aaKnown RBP26.18■■□□□ 1.78
COL6A2-208ENST00000485591 KDM3BQ7LBC6 1761 aa26.18■■□□□ 1.78
COL6A2-208ENST00000485591 ZNF831Q5JPB2 1677 aa26.16■■□□□ 1.78
COL6A2-208ENST00000485591 CCDC27Q2M243 656 aa26.15■■□□□ 1.78
COL6A2-208ENST00000485591 SMARCC1Q92922 1105 aaPredicted RBP26.15■■□□□ 1.78
COL6A2-208ENST00000485591 THUMPD2Q9BTF0 503 aaKnown RBP26.15■■□□□ 1.78
COL6A2-208ENST00000485591 PALLDQ8WX93 1383 aa26.15■■□□□ 1.78
COL6A2-208ENST00000485591 NUP188Q5SRE5 1749 aa26.14■■□□□ 1.78
COL6A2-208ENST00000485591 DEFB132Q7Z7B7 95 aa26.14■■□□□ 1.78
COL6A2-208ENST00000485591 CICQ96RK0 1608 aaPredicted RBP26.14■■□□□ 1.77
COL6A2-208ENST00000485591 EN1Q05925 392 aaPredicted RBP26.13■■□□□ 1.77
COL6A2-208ENST00000485591 NGEFQ8N5V2 710 aa26.13■■□□□ 1.77
COL6A2-208ENST00000485591 CAMKK2Q96RR4 588 aa26.13■■□□□ 1.77
COL6A2-208ENST00000485591 ATG3Q9NT62 314 aa26.13■■□□□ 1.77
COL6A2-208ENST00000485591 ASAP1Q9ULH1 1129 aa26.13■■□□□ 1.77
COL6A2-208ENST00000485591 KCPQ6ZWJ8 1503 aa26.12■■□□□ 1.77
COL6A2-208ENST00000485591 TAF1LQ8IZX4 1826 aa26.11■■□□□ 1.77
COL6A2-208ENST00000485591 C5P01031 1676 aa26.1■■□□□ 1.77
COL6A2-208ENST00000485591 SENP3-EIF4A1A0A087X0R7 540 aa26.1■■□□□ 1.77
COL6A2-208ENST00000485591 TAF7Q15545 349 aaPredicted RBP26.1■■□□□ 1.77
COL6A2-208ENST00000485591 BTBD11A6QL63 1104 aa26.09■■□□□ 1.77
COL6A2-208ENST00000485591 EZH2Q15910 746 aaKnown RBP26.09■■□□□ 1.77
COL6A2-208ENST00000485591 TJP1Q07157 1748 aa26.08■■□□□ 1.77
COL6A2-208ENST00000485591 WWC1Q8IX03 1113 aa26.08■■□□□ 1.77
COL6A2-208ENST00000485591 CALD1Q05682 793 aaKnown RBP26.07■■□□□ 1.76
COL6A2-208ENST00000485591 SLC39A6Q13433 755 aa26.07■■□□□ 1.76
COL6A2-208ENST00000485591 TXNRD1Q16881 649 aa26.07■■□□□ 1.76
COL6A2-208ENST00000485591 COL5A3P25940 1745 aaPredicted RBP26.07■■□□□ 1.76
COL6A2-208ENST00000485591 SLC27A3Q5K4L6 730 aa26.06■■□□□ 1.76
COL6A2-208ENST00000485591 ZNF790Q6PG37 636 aa26.06■■□□□ 1.76
COL6A2-208ENST00000485591 TTC5Q8N0Z6 440 aa26.06■■□□□ 1.76
COL6A2-208ENST00000485591 PROM2Q8N271 834 aa26.06■■□□□ 1.76
COL6A2-208ENST00000485591 BABAM1Q9NWV8 329 aa26.05■■□□□ 1.76
COL6A2-208ENST00000485591 LOC102724428A0A0B4J2F2 783 aa26.04■■□□□ 1.76
COL6A2-208ENST00000485591 SIK1P57059 783 aa26.04■■□□□ 1.76
COL6A2-208ENST00000485591 CCNL1Q9UK58 526 aaPredicted RBP26.04■■□□□ 1.76
COL6A2-208ENST00000485591 SALL2Q9Y467 1007 aaPredicted RBP26.04■■□□□ 1.76
COL6A2-208ENST00000485591 PTCD1O75127 700 aaKnown RBP26.02■■□□□ 1.76
COL6A2-208ENST00000485591 RBM42Q9BTD8 480 aaKnown RBP26.02■■□□□ 1.76
COL6A2-208ENST00000485591 MIS18AQ9NYP9 233 aa26.02■■□□□ 1.76
COL6A2-208ENST00000485591 LAMB4A4D0S4 1761 aa26.01■■□□□ 1.75
COL6A2-208ENST00000485591 KCNQ3O43525 872 aa26.01■■□□□ 1.75
COL6A2-208ENST00000485591 CFAP44Q96MT7 982 aa26.01■■□□□ 1.75
COL6A2-208ENST00000485591 LRRC4BQ9NT99 713 aa26.01■■□□□ 1.75
COL6A2-208ENST00000485591 IFT57Q9NWB7 429 aa26.01■■□□□ 1.75
COL6A2-208ENST00000485591 TSPYL4Q9UJ04 414 aa26.01■■□□□ 1.75
COL6A2-208ENST00000485591 C4BP0C0L5 1744 aa26■■□□□ 1.75
COL6A2-208ENST00000485591 IL16Q14005 1332 aa26■■□□□ 1.75
COL6A2-208ENST00000485591 ZNF521Q96K83 1311 aa26■■□□□ 1.75
COL6A2-208ENST00000485591 CHL1O00533 1208 aa26■■□□□ 1.75
COL6A2-208ENST00000485591 WDR63Q8IWG1 891 aa26■■□□□ 1.75
COL6A2-208ENST00000485591 SLC4A9Q96Q91 983 aa26■■□□□ 1.75
COL6A2-208ENST00000485591 HEG1Q9ULI3 1381 aa25.99■■□□□ 1.75
COL6A2-208ENST00000485591 ZNF853P0CG23 659 aa25.99■■□□□ 1.75
COL6A2-208ENST00000485591 ATP6V1AP38606 617 aa25.99■■□□□ 1.75
COL6A2-208ENST00000485591 ZNF496Q96IT1 587 aaPredicted RBP25.99■■□□□ 1.75
COL6A2-208ENST00000485591 FMNL2Q96PY5 1086 aa25.99■■□□□ 1.75
COL6A2-208ENST00000485591 KCNQ4P56696 695 aa25.98■■□□□ 1.75
COL6A2-208ENST00000485591 GNAI1P63096 354 aa25.98■■□□□ 1.75
COL6A2-208ENST00000485591 VSIG10Q8N0Z9 540 aa25.98■■□□□ 1.75
COL6A2-208ENST00000485591 LAS1LQ9Y4W2 734 aaKnown RBP25.98■■□□□ 1.75
COL6A2-208ENST00000485591 HMGB2P26583 209 aaKnown RBP25.97■■□□□ 1.75
COL6A2-208ENST00000485591 ITPK1Q13572 414 aa25.96■■□□□ 1.75
COL6A2-208ENST00000485591 TUBGCP6Q96RT7 1819 aa25.95■■□□□ 1.75
COL6A2-208ENST00000485591 QSER1Q2KHR3 1735 aa25.95■■□□□ 1.74
COL6A2-208ENST00000485591 EIF4A1P60842 406 aaKnown RBP25.94■■□□□ 1.74
COL6A2-208ENST00000485591 HNRNPUQ00839 825 aaKnown RBP eCLIP25.94■■□□□ 1.74
COL6A2-208ENST00000485591 MBIPQ9NS73 344 aa25.94■■□□□ 1.74
COL6A2-208ENST00000485591 UBR3Q6ZT12 1888 aa25.93■■□□□ 1.74
COL6A2-208ENST00000485591 LINC00116Q8NCU8 138 aa25.92■■□□□ 1.74
COL6A2-208ENST00000485591 MYH14Q7Z406 1995 aaKnown RBP25.92■■□□□ 1.74
COL6A2-208ENST00000485591 DNAJC10Q8IXB1 793 aa25.91■■□□□ 1.74
COL6A2-208ENST00000485591 SNRPA1P09661 255 aaKnown RBP25.9■■□□□ 1.74
COL6A2-208ENST00000485591 TEX13AQ9BXU3 409 aaPredicted RBP25.9■■□□□ 1.74
COL6A2-208ENST00000485591 ANO8Q9HCE9 1232 aaPredicted RBP25.9■■□□□ 1.74
COL6A2-208ENST00000485591 CNTNAP4Q9C0A0 1308 aa25.89■■□□□ 1.74
COL6A2-208ENST00000485591 NBPF14Q5TI25 921 aa25.89■■□□□ 1.74
COL6A2-208ENST00000485591 GIGYF1O75420 1035 aaPredicted RBP25.88■■□□□ 1.73
COL6A2-208ENST00000485591 GOLGA2Q08379 1002 aa25.88■■□□□ 1.73
COL6A2-208ENST00000485591 AKT1S1Q96B36 256 aa25.88■■□□□ 1.73
COL6A2-208ENST00000485591 SPINK5Q9NQ38 1064 aaPredicted RBP25.88■■□□□ 1.73
COL6A2-208ENST00000485591 FANCIQ9NVI1 1328 aa25.88■■□□□ 1.73
COL6A2-208ENST00000485591 CYP19A1P11511 503 aaPredicted RBP25.87■■□□□ 1.73
COL6A2-208ENST00000485591 ZNF827Q17R98 1081 aa25.87■■□□□ 1.73
COL6A2-208ENST00000485591 TSR2Q969E8 191 aaKnown RBP25.87■■□□□ 1.73
COL6A2-208ENST00000485591 STK32BQ9NY57 414 aa25.87■■□□□ 1.73
COL6A2-208ENST00000485591 PRAMEF22A3QJZ6 481 aa25.86■■□□□ 1.73
COL6A2-208ENST00000485591 SLC15A2Q16348 729 aa25.86■■□□□ 1.73
COL6A2-208ENST00000485591 MYH16Q9H6N6 1097 aa25.86■■□□□ 1.73
COL6A2-208ENST00000485591 ZBED9Q6R2W3 1325 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms