RNA–Protein interactions for RNA: ENST00000485556.5

STRC-211, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 4,253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-211ENST00000485556 ZBTB3Q9H5J0 574 aa11.94□□□□□ -0.5
STRC-211ENST00000485556 TTC37Q6PGP7 1564 aa11.94□□□□□ -0.5
STRC-211ENST00000485556 PIK3R4Q99570 1358 aa11.94□□□□□ -0.5
STRC-211ENST00000485556 PES1O00541 588 aaKnown RBP11.94□□□□□ -0.5
STRC-211ENST00000485556 VAMP4O75379 141 aa11.94□□□□□ -0.5
STRC-211ENST00000485556 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
STRC-211ENST00000485556 CCDC8Q9H0W5 538 aaPredicted RBP11.94□□□□□ -0.5
STRC-211ENST00000485556 MTMR7Q9Y216 660 aa11.94□□□□□ -0.5
STRC-211ENST00000485556 MSH6P52701 1360 aa11.93□□□□□ -0.5
STRC-211ENST00000485556 TPD52L1Q16890 204 aaPredicted RBP11.93□□□□□ -0.5
STRC-211ENST00000485556 MRPL50Q8N5N7 158 aaKnown RBP11.93□□□□□ -0.5
STRC-211ENST00000485556 ZFYVE9O95405 1425 aa11.93□□□□□ -0.5
STRC-211ENST00000485556 ATP5J2-PTCD1G3V325 749 aa11.93□□□□□ -0.5
STRC-211ENST00000485556 BICDL1Q6ZP65 573 aa11.93□□□□□ -0.5
STRC-211ENST00000485556 PPP1R42Q7Z4L9 355 aa11.93□□□□□ -0.5
STRC-211ENST00000485556 ARID3AQ99856 593 aa11.93□□□□□ -0.5
STRC-211ENST00000485556 CWC22Q9HCG8 908 aaKnown RBP11.93□□□□□ -0.5
STRC-211ENST00000485556 DMRT2Q9Y5R5 561 aa11.93□□□□□ -0.5
STRC-211ENST00000485556 HDAC1Q13547 482 aaPredicted RBP11.92□□□□□ -0.5
STRC-211ENST00000485556 SART3Q15020 963 aaKnown RBP11.92□□□□□ -0.5
STRC-211ENST00000485556 TSHZ3Q63HK5 1081 aa11.92□□□□□ -0.5
STRC-211ENST00000485556 C19orf44Q9H6X5 657 aa11.92□□□□□ -0.5
STRC-211ENST00000485556 MBD3O95983 291 aa11.92□□□□□ -0.5
STRC-211ENST00000485556 GCP02774 474 aa11.92□□□□□ -0.5
STRC-211ENST00000485556 SLC39A6Q13433 755 aa11.92□□□□□ -0.5
STRC-211ENST00000485556 BMP2KLQ5H9B9 411 aa11.92□□□□□ -0.5
STRC-211ENST00000485556 CHPF2Q9P2E5 772 aa11.92□□□□□ -0.5
STRC-211ENST00000485556 SASS6Q6UVJ0 657 aa11.92□□□□□ -0.5
STRC-211ENST00000485556 STK11IPQ8N1F8 1099 aa11.91□□□□□ -0.5
STRC-211ENST00000485556 GNL3LQ9NVN8 582 aaKnown RBP11.91□□□□□ -0.5
STRC-211ENST00000485556 ATP2B1P20020 1258 aa11.91□□□□□ -0.5
STRC-211ENST00000485556 METTL24Q5JXM2 366 aa11.91□□□□□ -0.5
STRC-211ENST00000485556 UBE3BQ7Z3V4 1068 aa11.91□□□□□ -0.5
STRC-211ENST00000485556 MRE11P49959 708 aa11.91□□□□□ -0.5
STRC-211ENST00000485556 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
STRC-211ENST00000485556 EXOC5O00471 708 aa11.91□□□□□ -0.5
STRC-211ENST00000485556 IDH1O75874 414 aaKnown RBP11.91□□□□□ -0.5
STRC-211ENST00000485556 TBC1D9Q6ZT07 1266 aa11.91□□□□□ -0.5
STRC-211ENST00000485556 SDF4Q9BRK5 362 aa11.91□□□□□ -0.5
STRC-211ENST00000485556 MCM4P33991 863 aa11.9□□□□□ -0.5
STRC-211ENST00000485556 ANKRD1Q15327 319 aa11.9□□□□□ -0.5
STRC-211ENST00000485556 JARID2Q92833 1246 aaPredicted RBP11.9□□□□□ -0.5
STRC-211ENST00000485556 ERCC6L2Q5T890 1561 aa11.9□□□□□ -0.5
STRC-211ENST00000485556 GPTP24298 496 aa11.9□□□□□ -0.5
STRC-211ENST00000485556 NASPP49321 788 aaPredicted RBP11.9□□□□□ -0.5
STRC-211ENST00000485556 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
STRC-211ENST00000485556 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
STRC-211ENST00000485556 TRPM2O94759 1503 aa11.9□□□□□ -0.5
STRC-211ENST00000485556 KAT6BQ8WYB5 2073 aa11.9□□□□□ -0.5
STRC-211ENST00000485556 SNRPA1P09661 255 aaKnown RBP11.9□□□□□ -0.5
STRC-211ENST00000485556 CEBPZQ03701 1054 aaKnown RBP11.9□□□□□ -0.5
STRC-211ENST00000485556 TBC1D2Q9BYX2 928 aa11.9□□□□□ -0.5
STRC-211ENST00000485556 WDR33Q9C0J8 1336 aaKnown RBP11.9□□□□□ -0.51
STRC-211ENST00000485556 LTKP29376 864 aa11.89□□□□□ -0.51
STRC-211ENST00000485556 AKAP4Q5JQC9 854 aa11.89□□□□□ -0.51
STRC-211ENST00000485556 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
STRC-211ENST00000485556 HOXC9P31274 260 aa11.89□□□□□ -0.51
STRC-211ENST00000485556 IL13P35225 146 aa11.89□□□□□ -0.51
STRC-211ENST00000485556 CHD1O14646 1710 aa11.89□□□□□ -0.51
STRC-211ENST00000485556 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
STRC-211ENST00000485556 NUCB1Q02818 461 aa11.89□□□□□ -0.51
STRC-211ENST00000485556 LARP1BQ659C4 914 aaKnown RBP11.89□□□□□ -0.51
STRC-211ENST00000485556 ANKRD44Q8N8A2 993 aa11.89□□□□□ -0.51
STRC-211ENST00000485556 PRPF40BQ6NWY9 871 aaKnown RBP11.89□□□□□ -0.51
STRC-211ENST00000485556 NACAP1Q9BZK3 213 aa11.89□□□□□ -0.51
STRC-211ENST00000485556 TMEM2Q9UHN6 1383 aa11.88□□□□□ -0.51
STRC-211ENST00000485556 UGGT1Q9NYU2 1555 aa11.88□□□□□ -0.51
STRC-211ENST00000485556 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
STRC-211ENST00000485556 NGLY1Q96IV0 654 aa11.88□□□□□ -0.51
STRC-211ENST00000485556 ORAI2Q96SN7 254 aa11.88□□□□□ -0.51
STRC-211ENST00000485556 ECHDC1Q9NTX5 307 aa11.88□□□□□ -0.51
STRC-211ENST00000485556 TRMT112Q9UI30 125 aaKnown RBP11.88□□□□□ -0.51
STRC-211ENST00000485556 IGHMBP2P38935 993 aaKnown RBP11.88□□□□□ -0.51
STRC-211ENST00000485556 IFIT5Q13325 482 aaKnown RBP11.88□□□□□ -0.51
STRC-211ENST00000485556 ZSCAN25Q6NSZ9 544 aa11.88□□□□□ -0.51
STRC-211ENST00000485556 XAGE3Q8WTP9 111 aa11.88□□□□□ -0.51
STRC-211ENST00000485556 IFIT1P09914 478 aaKnown RBP11.87□□□□□ -0.51
STRC-211ENST00000485556 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
STRC-211ENST00000485556 COPS6Q7L5N1 327 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 ABCF2Q9UG63 623 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 XBP1P17861 261 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 PIP4K2AP48426 406 aaPredicted RBP11.87□□□□□ -0.51
STRC-211ENST00000485556 KRT32Q14532 448 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 ZCRB1Q8TBF4 217 aaKnown RBP11.87□□□□□ -0.51
STRC-211ENST00000485556 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 ZFYVE16Q7Z3T8 1539 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 TTC22Q5TAA0 569 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 IP6K1Q92551 441 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 LRP2BPQ9P2M1 347 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 CTNNA3Q9UI47 895 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 HOOK1Q9UJC3 728 aaKnown RBP11.87□□□□□ -0.51
STRC-211ENST00000485556 SBNO2Q9Y2G9 1366 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
STRC-211ENST00000485556 RHPN1Q8TCX5 695 aa11.86□□□□□ -0.51
STRC-211ENST00000485556 ZBTB40Q9NUA8 1239 aa11.86□□□□□ -0.51
STRC-211ENST00000485556 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
STRC-211ENST00000485556 AKAP2Q9Y2D5 859 aa11.86□□□□□ -0.51
STRC-211ENST00000485556 KINO60870 393 aaKnown RBP11.86□□□□□ -0.51
STRC-211ENST00000485556 RAI14Q9P0K7 980 aa11.86□□□□□ -0.51
STRC-211ENST00000485556 TDO2P48775 406 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms