RNA–Protein interactions for RNA: ENST00000485373.5

RTCB-204, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, human

TSL 4

Gene RTCB, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTCB-204	ENST00000485373	FAM9B	Q8IZU0	186 aa		12.06	□□□□□ -0.48
RTCB-204	ENST00000485373	NFATC2IP	Q8NCF5	419 aa		12.06	□□□□□ -0.48
RTCB-204	ENST00000485373	ASAP1	Q9ULH1	1129 aa		12.06	□□□□□ -0.48
RTCB-204	ENST00000485373	RRP7A	Q9Y3A4	280 aa	Known RBP	12.06	□□□□□ -0.48
RTCB-204	ENST00000485373	HTATSF1	O43719	755 aa	Known RBP	12.05	□□□□□ -0.48
RTCB-204	ENST00000485373	TMPO	P42166	694 aa	Known RBP	12.05	□□□□□ -0.48
RTCB-204	ENST00000485373	RIPK4	P57078	832 aa		12.05	□□□□□ -0.48
RTCB-204	ENST00000485373	LMOD3	Q0VAK6	560 aa		12.05	□□□□□ -0.48
RTCB-204	ENST00000485373	DCTN1	Q14203	1278 aa		12.05	□□□□□ -0.48
RTCB-204	ENST00000485373	NBPF14	Q5TI25	921 aa		12.05	□□□□□ -0.48
RTCB-204	ENST00000485373	IL17RE	Q8NFR9	667 aa		12.05	□□□□□ -0.48
RTCB-204	ENST00000485373	PNISR	Q8TF01	805 aa	Known RBP	12.05	□□□□□ -0.48
RTCB-204	ENST00000485373	CCNL1	Q9UK58	526 aa	Predicted RBP	12.05	□□□□□ -0.48
RTCB-204	ENST00000485373	KCNQ4	P56696	695 aa		12.04	□□□□□ -0.48
RTCB-204	ENST00000485373	SLC27A3	Q5K4L6	730 aa		12.04	□□□□□ -0.48
RTCB-204	ENST00000485373	RBM42	Q9BTD8	480 aa	Known RBP	12.04	□□□□□ -0.48
RTCB-204	ENST00000485373	ATG3	Q9NT62	314 aa		12.04	□□□□□ -0.48
RTCB-204	ENST00000485373	SIPA1L3	O60292	1781 aa	Predicted RBP	12.04	□□□□□ -0.48
RTCB-204	ENST00000485373	CCER2	I3L3R5	266 aa		12.03	□□□□□ -0.48
RTCB-204	ENST00000485373	APAF1	O14727	1248 aa		12.03	□□□□□ -0.48
RTCB-204	ENST00000485373	TTC5	Q8N0Z6	440 aa		12.03	□□□□□ -0.48
RTCB-204	ENST00000485373	PROM2	Q8N271	834 aa		12.03	□□□□□ -0.48
RTCB-204	ENST00000485373	CEMIP	Q8WUJ3	1361 aa		12.03	□□□□□ -0.48
RTCB-204	ENST00000485373	TAF1L	Q8IZX4	1826 aa		12.02	□□□□□ -0.48
RTCB-204	ENST00000485373	PAPPA	Q13219	1627 aa		12.02	□□□□□ -0.49
RTCB-204	ENST00000485373	LOC102724428	A0A0B4J2F2	783 aa		12.02	□□□□□ -0.49
RTCB-204	ENST00000485373	PTCD1	O75127	700 aa	Known RBP	12.02	□□□□□ -0.49
RTCB-204	ENST00000485373	SIK1	P57059	783 aa		12.02	□□□□□ -0.49
RTCB-204	ENST00000485373	SLC39A6	Q13433	755 aa		12.02	□□□□□ -0.49
RTCB-204	ENST00000485373	MIER1	Q8N108	512 aa		12.02	□□□□□ -0.49
RTCB-204	ENST00000485373	THUMPD2	Q9BTF0	503 aa	Known RBP	12.02	□□□□□ -0.49
RTCB-204	ENST00000485373	STK32B	Q9NY57	414 aa		12.02	□□□□□ -0.49
RTCB-204	ENST00000485373	C5	P01031	1676 aa		12.02	□□□□□ -0.49
RTCB-204	ENST00000485373	SENP3-EIF4A1	A0A087X0R7	540 aa		12.01	□□□□□ -0.49
RTCB-204	ENST00000485373	PSD	A5PKW4	1024 aa	Predicted RBP	12.01	□□□□□ -0.49
RTCB-204	ENST00000485373	BTBD11	A6QL63	1104 aa		12.01	□□□□□ -0.49
RTCB-204	ENST00000485373	ATP6V1A	P38606	617 aa		12.01	□□□□□ -0.49
RTCB-204	ENST00000485373	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.01	□□□□□ -0.49
RTCB-204	ENST00000485373	LRRC4B	Q9NT99	713 aa		12.01	□□□□□ -0.49
RTCB-204	ENST00000485373	HMGB2	P26583	209 aa	Known RBP	12	□□□□□ -0.49
RTCB-204	ENST00000485373	R3HDM1	Q15032	1099 aa	Known RBP	12	□□□□□ -0.49
RTCB-204	ENST00000485373	TAF7	Q15545	349 aa	Predicted RBP	11.99	□□□□□ -0.49
RTCB-204	ENST00000485373	UBR2	Q8IWV8	1755 aa		11.99	□□□□□ -0.49
RTCB-204	ENST00000485373	C4B	P0C0L5	1744 aa		11.98	□□□□□ -0.49
RTCB-204	ENST00000485373	KCP	Q6ZWJ8	1503 aa		11.98	□□□□□ -0.49
RTCB-204	ENST00000485373	ZNF790	Q6PG37	636 aa		11.98	□□□□□ -0.49
RTCB-204	ENST00000485373	AK7	Q96M32	723 aa		11.98	□□□□□ -0.49
RTCB-204	ENST00000485373	TUBGCP6	Q96RT7	1819 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	TJP1	Q07157	1748 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	ZNF831	Q5JPB2	1677 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	KCNQ3	O43525	872 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	ITPK1	Q13572	414 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	SLC15A2	Q16348	729 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	ZNF827	Q17R98	1081 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	LINC00116	Q8NCU8	138 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	FMNL2	Q96PY5	1086 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	MIS18A	Q9NYP9	233 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	TFCP2L1	Q9NZI6	479 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	TSPYL4	Q9UJ04	414 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	TRIM35	Q9UPQ4	493 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	SALL2	Q9Y467	1007 aa	Predicted RBP	11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	LAS1L	Q9Y4W2	734 aa	Known RBP	11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	KDM3B	Q7LBC6	1761 aa		11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	COL5A3	P25940	1745 aa	Predicted RBP	11.97	□□□□□ -0.49
RTCB-204	ENST00000485373	DNAJC10	Q8IXB1	793 aa		11.96	□□□□□ -0.49
RTCB-204	ENST00000485373	ZNF496	Q96IT1	587 aa	Predicted RBP	11.96	□□□□□ -0.49
RTCB-204	ENST00000485373	SLC4A9	Q96Q91	983 aa		11.96	□□□□□ -0.49
RTCB-204	ENST00000485373	HEG1	Q9ULI3	1381 aa		11.95	□□□□□ -0.5
RTCB-204	ENST00000485373	CALD1	Q05682	793 aa	Known RBP	11.95	□□□□□ -0.5
RTCB-204	ENST00000485373	AKT1S1	Q96B36	256 aa		11.95	□□□□□ -0.5
RTCB-204	ENST00000485373	UBR3	Q6ZT12	1888 aa		11.95	□□□□□ -0.5
RTCB-204	ENST00000485373	QSER1	Q2KHR3	1735 aa		11.94	□□□□□ -0.5
RTCB-204	ENST00000485373	MYH14	Q7Z406	1995 aa	Known RBP	11.94	□□□□□ -0.5
RTCB-204	ENST00000485373	CIC	Q96RK0	1608 aa	Predicted RBP	11.94	□□□□□ -0.5
RTCB-204	ENST00000485373	GNPAT	O15228	680 aa		11.94	□□□□□ -0.5
RTCB-204	ENST00000485373	MSH5	O43196	834 aa		11.94	□□□□□ -0.5
RTCB-204	ENST00000485373	PHF14	O94880	888 aa		11.94	□□□□□ -0.5
RTCB-204	ENST00000485373	VSIG10	Q8N0Z9	540 aa		11.94	□□□□□ -0.5
RTCB-204	ENST00000485373	CNTNAP4	Q9C0A0	1308 aa		11.93	□□□□□ -0.5
RTCB-204	ENST00000485373	CRKL	P46109	303 aa	Known RBP	11.93	□□□□□ -0.5
RTCB-204	ENST00000485373	STARD3NL	O95772	234 aa		11.92	□□□□□ -0.5
RTCB-204	ENST00000485373	SNRPA1	P09661	255 aa	Known RBP	11.92	□□□□□ -0.5
RTCB-204	ENST00000485373	CCDC27	Q2M243	656 aa		11.92	□□□□□ -0.5
RTCB-204	ENST00000485373	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.92	□□□□□ -0.5
RTCB-204	ENST00000485373	BABAM1	Q9NWV8	329 aa		11.92	□□□□□ -0.5
RTCB-204	ENST00000485373	RTCB	Q9Y3I0	505 aa	Known RBP	11.92	□□□□□ -0.5
RTCB-204	ENST00000485373	LAMB4	A4D0S4	1761 aa		11.92	□□□□□ -0.5
RTCB-204	ENST00000485373	CASZ1	Q86V15	1759 aa		11.92	□□□□□ -0.5
RTCB-204	ENST00000485373	PNPLA7	Q6ZV29	1317 aa		11.91	□□□□□ -0.5
RTCB-204	ENST00000485373	EIF4A1	P60842	406 aa	Known RBP	11.91	□□□□□ -0.5
RTCB-204	ENST00000485373	GNAI1	P63096	354 aa		11.91	□□□□□ -0.5
RTCB-204	ENST00000485373	RC3H1	Q5TC82	1133 aa	Known RBP	11.91	□□□□□ -0.5
RTCB-204	ENST00000485373	WWC1	Q8IX03	1113 aa		11.91	□□□□□ -0.5
RTCB-204	ENST00000485373	FLAD1	Q8NFF5	587 aa		11.91	□□□□□ -0.5
RTCB-204	ENST00000485373	CFAP44	Q96MT7	982 aa		11.91	□□□□□ -0.5
RTCB-204	ENST00000485373	CCDC87	Q9NVE4	849 aa		11.91	□□□□□ -0.5
RTCB-204	ENST00000485373	IFT57	Q9NWB7	429 aa		11.91	□□□□□ -0.5
RTCB-204	ENST00000485373	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.9	□□□□□ -0.5
RTCB-204	ENST00000485373	CHL1	O00533	1208 aa		11.9	□□□□□ -0.5
RTCB-204	ENST00000485373	CYP19A1	P11511	503 aa	Predicted RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 301.3 ms