RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 SLC34A2O95436 690 aa13.99□□□□□ -0.17
TRUB1-202ENST00000485065 RASEFQ8IZ41 740 aa13.99□□□□□ -0.17
TRUB1-202ENST00000485065 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
TRUB1-202ENST00000485065 MAMSTRQ6ZN01 415 aa13.98□□□□□ -0.17
TRUB1-202ENST00000485065 MAP3K13O43283 966 aa13.97□□□□□ -0.17
TRUB1-202ENST00000485065 DOT1LQ8TEK3 1739 aa13.97□□□□□ -0.17
TRUB1-202ENST00000485065 LTN1O94822 1766 aa13.96□□□□□ -0.17
TRUB1-202ENST00000485065 ZCRB1Q8TBF4 217 aaKnown RBP13.96□□□□□ -0.17
TRUB1-202ENST00000485065 IP6K1Q92551 441 aa13.96□□□□□ -0.17
TRUB1-202ENST00000485065 C5P01031 1676 aa13.95□□□□□ -0.18
TRUB1-202ENST00000485065 FAM208AQ9UK61 1670 aaKnown RBP13.95□□□□□ -0.18
TRUB1-202ENST00000485065 NMRK2Q9NPI5 230 aa13.95□□□□□ -0.18
TRUB1-202ENST00000485065 PCNTO95613 3336 aa13.94□□□□□ -0.18
TRUB1-202ENST00000485065 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
TRUB1-202ENST00000485065 NSD3Q9BZ95 1437 aa13.94□□□□□ -0.18
TRUB1-202ENST00000485065 MON2Q7Z3U7 1717 aa13.93□□□□□ -0.18
TRUB1-202ENST00000485065 TAF1LQ8IZX4 1826 aa13.93□□□□□ -0.18
TRUB1-202ENST00000485065 TIE1P35590 1138 aa13.93□□□□□ -0.18
TRUB1-202ENST00000485065 WWC3Q9ULE0 1092 aa13.93□□□□□ -0.18
TRUB1-202ENST00000485065 CGNL1Q0VF96 1302 aa13.92□□□□□ -0.18
TRUB1-202ENST00000485065 TGFB2P61812 414 aa13.92□□□□□ -0.18
TRUB1-202ENST00000485065 HTRA3P83110 453 aa13.92□□□□□ -0.18
TRUB1-202ENST00000485065 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRUB1-202ENST00000485065 C10orf71Q711Q0 1435 aa13.91□□□□□ -0.18
TRUB1-202ENST00000485065 SSFA2P28290 1259 aa13.91□□□□□ -0.18
TRUB1-202ENST00000485065 NME9Q86XW9 330 aa13.91□□□□□ -0.18
TRUB1-202ENST00000485065 AK7Q96M32 723 aa13.91□□□□□ -0.18
TRUB1-202ENST00000485065 ROCK2O75116 1388 aaKnown RBP13.91□□□□□ -0.18
TRUB1-202ENST00000485065 PLEKHG2Q9H7P9 1386 aa13.91□□□□□ -0.18
TRUB1-202ENST00000485065 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
TRUB1-202ENST00000485065 MIER1Q8N108 512 aa13.9□□□□□ -0.18
TRUB1-202ENST00000485065 SCUBE2Q9NQ36 999 aa13.9□□□□□ -0.18
TRUB1-202ENST00000485065 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
TRUB1-202ENST00000485065 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
TRUB1-202ENST00000485065 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
TRUB1-202ENST00000485065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.89□□□□□ -0.19
TRUB1-202ENST00000485065 SMARCC1Q92922 1105 aaPredicted RBP13.89□□□□□ -0.19
TRUB1-202ENST00000485065 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
TRUB1-202ENST00000485065 KIF13BQ9NQT8 1826 aa13.89□□□□□ -0.19
TRUB1-202ENST00000485065 PXDNLA1KZ92 1463 aa13.88□□□□□ -0.19
TRUB1-202ENST00000485065 ARHGAP27Q6ZUM4 889 aa13.88□□□□□ -0.19
TRUB1-202ENST00000485065 AMIGO3Q86WK7 504 aa13.88□□□□□ -0.19
TRUB1-202ENST00000485065 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
TRUB1-202ENST00000485065 TOGARAM1Q9Y4F4 1720 aa13.87□□□□□ -0.19
TRUB1-202ENST00000485065 MEGF6O75095 1541 aa13.87□□□□□ -0.19
TRUB1-202ENST00000485065 HSPA1AP0DMV8 641 aaKnown RBP13.87□□□□□ -0.19
TRUB1-202ENST00000485065 HSPA1BP0DMV9 641 aaKnown RBP13.87□□□□□ -0.19
TRUB1-202ENST00000485065 SMC1BQ8NDV3 1235 aa13.87□□□□□ -0.19
TRUB1-202ENST00000485065 BCS1LQ9Y276 419 aa13.87□□□□□ -0.19
TRUB1-202ENST00000485065 EDC4Q6P2E9 1401 aaKnown RBP13.87□□□□□ -0.19
TRUB1-202ENST00000485065 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
TRUB1-202ENST00000485065 LTV1Q96GA3 475 aaPredicted RBP13.86□□□□□ -0.19
TRUB1-202ENST00000485065 COLQQ9Y215 455 aaPredicted RBP13.86□□□□□ -0.19
TRUB1-202ENST00000485065 CD163L1Q9NR16 1453 aa13.86□□□□□ -0.19
TRUB1-202ENST00000485065 TONSLQ96HA7 1378 aa13.85□□□□□ -0.19
TRUB1-202ENST00000485065 KIAA1551Q9HCM1 1747 aa13.85□□□□□ -0.19
TRUB1-202ENST00000485065 PHF14O94880 888 aa13.85□□□□□ -0.19
TRUB1-202ENST00000485065 HOXC9P31274 260 aa13.85□□□□□ -0.19
TRUB1-202ENST00000485065 C9orf131Q5VYM1 1079 aa13.85□□□□□ -0.19
TRUB1-202ENST00000485065 HDGFL2Q7Z4V5 671 aaPredicted RBP13.85□□□□□ -0.19
TRUB1-202ENST00000485065 MMP10P09238 476 aa13.84□□□□□ -0.19
TRUB1-202ENST00000485065 CARD11Q9BXL7 1154 aa13.84□□□□□ -0.19
TRUB1-202ENST00000485065 A0A0G2JLW4 131 aa13.83□□□□□ -0.2
TRUB1-202ENST00000485065 MPRIPQ6WCQ1 1025 aa13.83□□□□□ -0.2
TRUB1-202ENST00000485065 RAPGEF4Q8WZA2 1011 aa13.83□□□□□ -0.2
TRUB1-202ENST00000485065 PCDH11XQ9BZA7 1347 aa13.83□□□□□ -0.2
TRUB1-202ENST00000485065 PCDH11YQ9BZA8 1340 aa13.83□□□□□ -0.2
TRUB1-202ENST00000485065 N4BP2Q86UW6 1770 aaPredicted RBP13.82□□□□□ -0.2
TRUB1-202ENST00000485065 FCHSD2O94868 740 aa13.82□□□□□ -0.2
TRUB1-202ENST00000485065 NLGN1Q8N2Q7 840 aa13.82□□□□□ -0.2
TRUB1-202ENST00000485065 FAM163AQ96GL9 167 aaPredicted RBP13.82□□□□□ -0.2
TRUB1-202ENST00000485065 TESK2Q96S53 571 aa13.82□□□□□ -0.2
TRUB1-202ENST00000485065 RRAGCQ9HB90 399 aa13.82□□□□□ -0.2
TRUB1-202ENST00000485065 MAP3K19Q56UN5 1328 aa13.82□□□□□ -0.2
TRUB1-202ENST00000485065 BRCA1P38398 1863 aaKnown RBP13.82□□□□□ -0.2
TRUB1-202ENST00000485065 TNRC6CQ9HCJ0 1690 aaKnown RBP13.82□□□□□ -0.2
TRUB1-202ENST00000485065 ARFGEF1Q9Y6D6 1849 aa13.81□□□□□ -0.2
TRUB1-202ENST00000485065 KCPQ6ZWJ8 1503 aa13.81□□□□□ -0.2
TRUB1-202ENST00000485065 AMPHP49418 695 aa13.81□□□□□ -0.2
TRUB1-202ENST00000485065 NBPF6Q5VWK0 638 aa13.81□□□□□ -0.2
TRUB1-202ENST00000485065 NBPF4Q96M43 638 aa13.81□□□□□ -0.2
TRUB1-202ENST00000485065 TERF2IPQ9NYB0 399 aa13.81□□□□□ -0.2
TRUB1-202ENST00000485065 ZC3H4Q9UPT8 1303 aaKnown RBP13.81□□□□□ -0.2
TRUB1-202ENST00000485065 RGPD2P0DJD1 1756 aa13.81□□□□□ -0.2
TRUB1-202ENST00000485065 LOC102724428A0A0B4J2F2 783 aa13.8□□□□□ -0.2
TRUB1-202ENST00000485065 DPEP1P16444 411 aa13.8□□□□□ -0.2
TRUB1-202ENST00000485065 TATP17735 454 aaPredicted RBP13.8□□□□□ -0.2
TRUB1-202ENST00000485065 SIK1P57059 783 aa13.8□□□□□ -0.2
TRUB1-202ENST00000485065 SMIM5Q71RC9 77 aa13.8□□□□□ -0.2
TRUB1-202ENST00000485065 CCDC87Q9NVE4 849 aa13.8□□□□□ -0.2
TRUB1-202ENST00000485065 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
TRUB1-202ENST00000485065 RTL1A6NKG5 1358 aa13.8□□□□□ -0.2
TRUB1-202ENST00000485065 PKD1L3Q7Z443 1732 aa13.79□□□□□ -0.2
TRUB1-202ENST00000485065 KCNA3P22001 575 aa13.79□□□□□ -0.2
TRUB1-202ENST00000485065 TMF1P82094 1093 aa13.79□□□□□ -0.2
TRUB1-202ENST00000485065 LINC00116Q8NCU8 138 aa13.79□□□□□ -0.2
TRUB1-202ENST00000485065 PIGBQ92521 554 aa13.79□□□□□ -0.2
TRUB1-202ENST00000485065 DCAF5Q96JK2 942 aa13.79□□□□□ -0.2
TRUB1-202ENST00000485065 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
TRUB1-202ENST00000485065 SLC12A5Q9H2X9 1139 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms