RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 CD44P16070 742 aaKnown RBP10.46□□□□□ -0.73
MACF1-220ENST00000485063 AEBP1Q8IUX7 1158 aa10.46□□□□□ -0.73
MACF1-220ENST00000485063 KDRP35968 1356 aa10.46□□□□□ -0.74
MACF1-220ENST00000485063 ITGB4P16144 1822 aa10.46□□□□□ -0.74
MACF1-220ENST00000485063 NUP188Q5SRE5 1749 aa10.45□□□□□ -0.74
MACF1-220ENST00000485063 COL3A1P02461 1466 aaPredicted RBP10.45□□□□□ -0.74
MACF1-220ENST00000485063 NEFMP07197 916 aa10.45□□□□□ -0.74
MACF1-220ENST00000485063 PHKG2P15735 406 aa10.45□□□□□ -0.74
MACF1-220ENST00000485063 HMGB2P26583 209 aaKnown RBP10.45□□□□□ -0.74
MACF1-220ENST00000485063 ZNF530Q6P9A1 599 aaPredicted RBP10.45□□□□□ -0.74
MACF1-220ENST00000485063 U2AF1L5P0DN76 240 aaPredicted RBP10.44□□□□□ -0.74
MACF1-220ENST00000485063 U2AF1Q01081 240 aaKnown RBP eCLIP10.44□□□□□ -0.74
MACF1-220ENST00000485063 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
MACF1-220ENST00000485063 TXNRD1Q16881 649 aa10.44□□□□□ -0.74
MACF1-220ENST00000485063 MPRIPQ6WCQ1 1025 aa10.44□□□□□ -0.74
MACF1-220ENST00000485063 PTF1AQ7RTS3 328 aa10.44□□□□□ -0.74
MACF1-220ENST00000485063 MYBBP1AQ9BQG0 1328 aaKnown RBP10.43□□□□□ -0.74
MACF1-220ENST00000485063 VIRMAQ69YN4 1812 aaKnown RBP10.43□□□□□ -0.74
MACF1-220ENST00000485063 DCAF5Q96JK2 942 aa10.43□□□□□ -0.74
MACF1-220ENST00000485063 PNNQ9H307 717 aaKnown RBP10.43□□□□□ -0.74
MACF1-220ENST00000485063 TMOD3Q9NYL9 352 aa10.43□□□□□ -0.74
MACF1-220ENST00000485063 TOGARAM1Q9Y4F4 1720 aa10.43□□□□□ -0.74
MACF1-220ENST00000485063 LY75O60449 1722 aa10.42□□□□□ -0.74
MACF1-220ENST00000485063 AKAP4Q5JQC9 854 aa10.42□□□□□ -0.74
MACF1-220ENST00000485063 SLC27A3Q5K4L6 730 aa10.42□□□□□ -0.74
MACF1-220ENST00000485063 SMARCC1Q92922 1105 aaPredicted RBP10.42□□□□□ -0.74
MACF1-220ENST00000485063 ERVV-2B6SEH9 535 aa10.41□□□□□ -0.74
MACF1-220ENST00000485063 FCHSD2O94868 740 aa10.41□□□□□ -0.74
MACF1-220ENST00000485063 CABP4P57796 275 aa10.41□□□□□ -0.74
MACF1-220ENST00000485063 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
MACF1-220ENST00000485063 STK32BQ9NY57 414 aa10.41□□□□□ -0.74
MACF1-220ENST00000485063 SCN11AQ9UI33 1791 aa10.41□□□□□ -0.74
MACF1-220ENST00000485063 PSDA5PKW4 1024 aaPredicted RBP10.4□□□□□ -0.74
MACF1-220ENST00000485063 PRKAR2BP31323 418 aa10.4□□□□□ -0.74
MACF1-220ENST00000485063 R3HDM1Q15032 1099 aaKnown RBP10.4□□□□□ -0.74
MACF1-220ENST00000485063 MTHFSDQ2M296 383 aaKnown RBP10.4□□□□□ -0.74
MACF1-220ENST00000485063 PRKRIP1Q9H875 184 aaPredicted RBP10.4□□□□□ -0.74
MACF1-220ENST00000485063 ANP32CO43423 234 aa10.39□□□□□ -0.75
MACF1-220ENST00000485063 PROM2Q8N271 834 aa10.39□□□□□ -0.75
MACF1-220ENST00000485063 PIGBQ92521 554 aa10.39□□□□□ -0.75
MACF1-220ENST00000485063 RSPH6AQ9H0K4 717 aa10.39□□□□□ -0.75
MACF1-220ENST00000485063 CCNL1Q9UK58 526 aaPredicted RBP10.39□□□□□ -0.75
MACF1-220ENST00000485063 PALLDQ8WX93 1383 aa10.39□□□□□ -0.75
MACF1-220ENST00000485063 GNAT3A8MTJ3 354 aa10.38□□□□□ -0.75
MACF1-220ENST00000485063 WDR43Q15061 677 aaKnown RBP eCLIP10.38□□□□□ -0.75
MACF1-220ENST00000485063 MAPK8IP3Q9UPT6 1336 aa10.37□□□□□ -0.75
MACF1-220ENST00000485063 KDM6AO15550 1401 aaPredicted RBP10.37□□□□□ -0.75
MACF1-220ENST00000485063 SLC15A2Q16348 729 aa10.37□□□□□ -0.75
MACF1-220ENST00000485063 NFATC2IPQ8NCF5 419 aa10.37□□□□□ -0.75
MACF1-220ENST00000485063 RTF1Q92541 710 aaKnown RBP10.37□□□□□ -0.75
MACF1-220ENST00000485063 C5P01031 1676 aa10.37□□□□□ -0.75
MACF1-220ENST00000485063 MAP3K5Q99683 1374 aa10.37□□□□□ -0.75
MACF1-220ENST00000485063 TAF1LQ8IZX4 1826 aa10.36□□□□□ -0.75
MACF1-220ENST00000485063 RNMTO43148 476 aaKnown RBP10.36□□□□□ -0.75
MACF1-220ENST00000485063 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
MACF1-220ENST00000485063 TEFQ10587 303 aa10.36□□□□□ -0.75
MACF1-220ENST00000485063 LRRC4BQ9NT99 713 aa10.36□□□□□ -0.75
MACF1-220ENST00000485063 LOC102724428A0A0B4J2F2 783 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 SPDYE4A6NLX3 237 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 ATP6V1AP38606 617 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 SIK1P57059 783 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 PHACTR3Q96KR7 559 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 SLC52A2Q9HAB3 445 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 LGR6Q9HBX8 967 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 ATG3Q9NT62 314 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 ASAP1Q9ULH1 1129 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 PAPPAQ13219 1627 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 QSER1Q2KHR3 1735 aa10.35□□□□□ -0.75
MACF1-220ENST00000485063 KCNQ4P56696 695 aa10.34□□□□□ -0.75
MACF1-220ENST00000485063 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
MACF1-220ENST00000485063 TFCP2L1Q9NZI6 479 aa10.34□□□□□ -0.75
MACF1-220ENST00000485063 DLG5Q8TDM6 1919 aa10.34□□□□□ -0.75
MACF1-220ENST00000485063 ADAMTS7Q9UKP4 1686 aa10.34□□□□□ -0.75
MACF1-220ENST00000485063 HTATSF1O43719 755 aaKnown RBP10.33□□□□□ -0.76
MACF1-220ENST00000485063 TTC5Q8N0Z6 440 aa10.33□□□□□ -0.76
MACF1-220ENST00000485063 ZNF579Q8NAF0 562 aaKnown RBP10.33□□□□□ -0.76
MACF1-220ENST00000485063 AK7Q96M32 723 aa10.33□□□□□ -0.76
MACF1-220ENST00000485063 CREBZFQ9NS37 354 aa10.33□□□□□ -0.76
MACF1-220ENST00000485063 ZNF831Q5JPB2 1677 aa10.33□□□□□ -0.76
MACF1-220ENST00000485063 C4BP0C0L5 1744 aa10.33□□□□□ -0.76
MACF1-220ENST00000485063 MRC1P22897 1456 aa10.32□□□□□ -0.76
MACF1-220ENST00000485063 PTCD1O75127 700 aaKnown RBP10.32□□□□□ -0.76
MACF1-220ENST00000485063 FLAD1Q8NFF5 587 aa10.32□□□□□ -0.76
MACF1-220ENST00000485063 SPON1Q9HCB6 807 aa10.32□□□□□ -0.76
MACF1-220ENST00000485063 LRP5O75197 1615 aa10.32□□□□□ -0.76
MACF1-220ENST00000485063 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
MACF1-220ENST00000485063 CASZ1Q86V15 1759 aa10.31□□□□□ -0.76
MACF1-220ENST00000485063 TUBGCP6Q96RT7 1819 aa10.31□□□□□ -0.76
MACF1-220ENST00000485063 NFE2L2Q16236 605 aa10.31□□□□□ -0.76
MACF1-220ENST00000485063 ZNF827Q17R98 1081 aa10.31□□□□□ -0.76
MACF1-220ENST00000485063 IL17REQ8NFR9 667 aa10.31□□□□□ -0.76
MACF1-220ENST00000485063 DCBLD2Q96PD2 775 aa10.31□□□□□ -0.76
MACF1-220ENST00000485063 PLEKHF1Q96S99 279 aa10.31□□□□□ -0.76
MACF1-220ENST00000485063 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
MACF1-220ENST00000485063 LMOD3Q0VAK6 560 aa10.3□□□□□ -0.76
MACF1-220ENST00000485063 SLC16A10Q8TF71 515 aa10.3□□□□□ -0.76
MACF1-220ENST00000485063 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
MACF1-220ENST00000485063 PPP1R1BQ9UD71 204 aaPredicted RBP10.3□□□□□ -0.76
MACF1-220ENST00000485063 COL5A3P25940 1745 aaPredicted RBP10.3□□□□□ -0.76
MACF1-220ENST00000485063 CEMIPQ8WUJ3 1361 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms