RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 HTATSF1O43719 755 aaKnown RBP11.25□□□□□ -0.61
SND1-211ENST00000484767 MCCP23508 829 aa11.25□□□□□ -0.61
SND1-211ENST00000484767 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.25□□□□□ -0.61
SND1-211ENST00000484767 ARXQ96QS3 562 aa11.25□□□□□ -0.61
SND1-211ENST00000484767 PLEKHG3A1L390 1219 aa11.24□□□□□ -0.61
SND1-211ENST00000484767 ELL2O00472 640 aaPredicted RBP11.24□□□□□ -0.61
SND1-211ENST00000484767 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
SND1-211ENST00000484767 INTS4Q96HW7 963 aaKnown RBP11.24□□□□□ -0.61
SND1-211ENST00000484767 PDLIM2Q96JY6 352 aa11.24□□□□□ -0.61
SND1-211ENST00000484767 SRCIN1Q9C0H9 1055 aa11.24□□□□□ -0.61
SND1-211ENST00000484767 ERBB4Q15303 1308 aa11.24□□□□□ -0.61
SND1-211ENST00000484767 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.23□□□□□ -0.61
SND1-211ENST00000484767 OFD1O75665 1012 aa11.23□□□□□ -0.61
SND1-211ENST00000484767 MSNP26038 577 aaKnown RBP11.23□□□□□ -0.61
SND1-211ENST00000484767 CUL4AQ13619 759 aa11.23□□□□□ -0.61
SND1-211ENST00000484767 MCTP1Q6DN14 999 aa11.23□□□□□ -0.61
SND1-211ENST00000484767 BABAM1Q9NWV8 329 aa11.23□□□□□ -0.61
SND1-211ENST00000484767 TTC21AQ8NDW8 1320 aa11.23□□□□□ -0.61
SND1-211ENST00000484767 METP08581 1390 aa11.23□□□□□ -0.61
SND1-211ENST00000484767 USP6P35125 1406 aa11.23□□□□□ -0.61
SND1-211ENST00000484767 ZNF500O60304 480 aaPredicted RBP11.22□□□□□ -0.61
SND1-211ENST00000484767 GNAI3P08754 354 aa11.22□□□□□ -0.61
SND1-211ENST00000484767 KDRP35968 1356 aa11.22□□□□□ -0.61
SND1-211ENST00000484767 PDE1AP54750 535 aa11.22□□□□□ -0.61
SND1-211ENST00000484767 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
SND1-211ENST00000484767 HSP90AA2PQ14568 343 aaPredicted RBP11.22□□□□□ -0.61
SND1-211ENST00000484767 ZSCAN23Q3MJ62 389 aa11.22□□□□□ -0.61
SND1-211ENST00000484767 PTPRUQ92729 1446 aa11.22□□□□□ -0.61
SND1-211ENST00000484767 SALL3Q9BXA9 1300 aa11.22□□□□□ -0.61
SND1-211ENST00000484767 FAM83GA6ND36 823 aa11.21□□□□□ -0.61
SND1-211ENST00000484767 CSPP1Q1MSJ5 1256 aa11.21□□□□□ -0.61
SND1-211ENST00000484767 SULT6B1Q6IMI4 303 aa11.21□□□□□ -0.61
SND1-211ENST00000484767 LRSAM1Q6UWE0 723 aa11.21□□□□□ -0.61
SND1-211ENST00000484767 CERKQ8TCT0 537 aa11.21□□□□□ -0.61
SND1-211ENST00000484767 SYAP1Q96A49 352 aaPredicted RBP11.21□□□□□ -0.61
SND1-211ENST00000484767 STAP2Q9UGK3 403 aa11.21□□□□□ -0.61
SND1-211ENST00000484767 NOL7Q9UMY1 257 aaKnown RBP11.21□□□□□ -0.61
SND1-211ENST00000484767 SBNO1A3KN83 1393 aa11.2□□□□□ -0.62
SND1-211ENST00000484767 GNAI2P04899 355 aa11.2□□□□□ -0.62
SND1-211ENST00000484767 FBLN1P23142 703 aa11.2□□□□□ -0.62
SND1-211ENST00000484767 RRS1Q15050 365 aaKnown RBP11.2□□□□□ -0.62
SND1-211ENST00000484767 MEIS3Q99687 375 aa11.2□□□□□ -0.62
SND1-211ENST00000484767 FLT4P35916 1363 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 PRR36Q9H6K5 1346 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 CRYBG1Q9Y4K1 1723 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 PHF14O94880 888 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 BRD1O95696 1058 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 CAVIN1Q6NZI2 390 aaKnown RBP11.19□□□□□ -0.62
SND1-211ENST00000484767 C16orf71Q8IYS4 520 aaPredicted RBP11.19□□□□□ -0.62
SND1-211ENST00000484767 MAP7D2Q96T17 732 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 ESYT1Q9BSJ8 1104 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 CHMP4AQ9BY43 222 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 DIP2AQ14689 1571 aa11.19□□□□□ -0.62
SND1-211ENST00000484767 PLEKHG1Q9ULL1 1385 aa11.18□□□□□ -0.62
SND1-211ENST00000484767 ATP8B2P98198 1209 aa11.18□□□□□ -0.62
SND1-211ENST00000484767 DCTN1Q14203 1278 aa11.18□□□□□ -0.62
SND1-211ENST00000484767 RTF1Q92541 710 aaKnown RBP11.18□□□□□ -0.62
SND1-211ENST00000484767 STK31Q9BXU1 1019 aa11.18□□□□□ -0.62
SND1-211ENST00000484767 LRRCC1Q9C099 1032 aa11.18□□□□□ -0.62
SND1-211ENST00000484767 ZDHHC9Q9Y397 364 aa11.18□□□□□ -0.62
SND1-211ENST00000484767 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
SND1-211ENST00000484767 TNRQ92752 1358 aa11.17□□□□□ -0.62
SND1-211ENST00000484767 TMEM2Q9UHN6 1383 aa11.17□□□□□ -0.62
SND1-211ENST00000484767 CHD2O14647 1828 aaKnown RBP11.17□□□□□ -0.62
SND1-211ENST00000484767 NCLP19338 710 aaKnown RBP11.17□□□□□ -0.62
SND1-211ENST00000484767 UVSSAQ2YD98 709 aa11.17□□□□□ -0.62
SND1-211ENST00000484767 CCDC30Q5VVM6 783 aa11.17□□□□□ -0.62
SND1-211ENST00000484767 TXNDC2Q86VQ3 553 aa11.17□□□□□ -0.62
SND1-211ENST00000484767 OTUD7AQ8TE49 926 aaPredicted RBP11.17□□□□□ -0.62
SND1-211ENST00000484767 PDCL3Q9H2J4 239 aa11.17□□□□□ -0.62
SND1-211ENST00000484767 ACEP12821 1306 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 IGSF1Q8N6C5 1336 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 SMARCA5O60264 1052 aaPredicted RBP11.16□□□□□ -0.62
SND1-211ENST00000484767 RAB11FIP3O75154 756 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 PRPF40AO75400 957 aaKnown RBP11.16□□□□□ -0.62
SND1-211ENST00000484767 PLEKHG5O94827 1062 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 LETM1O95202 739 aaPredicted RBP11.16□□□□□ -0.62
SND1-211ENST00000484767 MX1P20591 662 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 KIAA1211Q6ZU35 1233 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 MTERF4Q7Z6M4 381 aaKnown RBP11.16□□□□□ -0.62
SND1-211ENST00000484767 AEBP1Q8IUX7 1158 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 FAM184AQ8NB25 1140 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 TMEM87AQ8NBN3 555 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 GPT2Q8TD30 523 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 TMX3Q96JJ7 454 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 RBSNQ9H1K0 784 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 TSPYL4Q9UJ04 414 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 ZKSCAN5Q9Y2L8 839 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 ROBO2Q9HCK4 1378 aa11.16□□□□□ -0.62
SND1-211ENST00000484767 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.62
SND1-211ENST00000484767 PIK3C2AO00443 1686 aa11.15□□□□□ -0.62
SND1-211ENST00000484767 PDIA4P13667 645 aaKnown RBP11.15□□□□□ -0.62
SND1-211ENST00000484767 CHMLP26374 656 aa11.15□□□□□ -0.62
SND1-211ENST00000484767 NEK4P51957 841 aa11.15□□□□□ -0.62
SND1-211ENST00000484767 MCM10Q7L590 875 aa11.15□□□□□ -0.62
SND1-211ENST00000484767 ZGPATQ8N5A5 531 aaKnown RBP11.15□□□□□ -0.62
SND1-211ENST00000484767 MARF1Q9Y4F3 1742 aaKnown RBP11.15□□□□□ -0.63
SND1-211ENST00000484767 KDM3BQ7LBC6 1761 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms