RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
APTX-226ENST00000483148 ERBB3P21860 1342 aa12.87□□□□□ -0.35
APTX-226ENST00000483148 ABCC6O95255 1503 aa12.87□□□□□ -0.35
APTX-226ENST00000483148 NSD3Q9BZ95 1437 aa12.87□□□□□ -0.35
APTX-226ENST00000483148 COL24A1Q17RW2 1714 aa12.86□□□□□ -0.35
APTX-226ENST00000483148 PER1O15534 1290 aaPredicted RBP12.86□□□□□ -0.35
APTX-226ENST00000483148 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.35
APTX-226ENST00000483148 DDX54Q8TDD1 881 aaKnown RBP12.86□□□□□ -0.35
APTX-226ENST00000483148 ANKRD24Q8TF21 1146 aa12.86□□□□□ -0.35
APTX-226ENST00000483148 TFCP2L1Q9NZI6 479 aa12.86□□□□□ -0.35
APTX-226ENST00000483148 VIRMAQ69YN4 1812 aaKnown RBP12.85□□□□□ -0.35
APTX-226ENST00000483148 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
APTX-226ENST00000483148 NME9Q86XW9 330 aa12.85□□□□□ -0.35
APTX-226ENST00000483148 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
APTX-226ENST00000483148 TPM2P07951 284 aa12.84□□□□□ -0.35
APTX-226ENST00000483148 USP54Q70EL1 1684 aa12.84□□□□□ -0.35
APTX-226ENST00000483148 CEP350Q5VT06 3117 aa12.84□□□□□ -0.35
APTX-226ENST00000483148 FSD2A1L4K1 749 aa12.84□□□□□ -0.35
APTX-226ENST00000483148 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
APTX-226ENST00000483148 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.84□□□□□ -0.35
APTX-226ENST00000483148 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
APTX-226ENST00000483148 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
APTX-226ENST00000483148 COL23A1Q86Y22 540 aaPredicted RBP12.83□□□□□ -0.36
APTX-226ENST00000483148 PODXL2Q9NZ53 605 aa12.83□□□□□ -0.36
APTX-226ENST00000483148 USP31Q70CQ4 1352 aa12.83□□□□□ -0.36
APTX-226ENST00000483148 TUBGCP6Q96RT7 1819 aa12.83□□□□□ -0.36
APTX-226ENST00000483148 QSER1Q2KHR3 1735 aa12.82□□□□□ -0.36
APTX-226ENST00000483148 KIF20BQ96Q89 1820 aa12.82□□□□□ -0.36
APTX-226ENST00000483148 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
APTX-226ENST00000483148 CGNL1Q0VF96 1302 aa12.81□□□□□ -0.36
APTX-226ENST00000483148 FYB1O15117 783 aa12.81□□□□□ -0.36
APTX-226ENST00000483148 AMER1Q5JTC6 1135 aaPredicted RBP12.81□□□□□ -0.36
APTX-226ENST00000483148 KNSTRNQ9Y448 316 aa12.81□□□□□ -0.36
APTX-226ENST00000483148 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
APTX-226ENST00000483148 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
APTX-226ENST00000483148 SYTL4Q96C24 671 aaPredicted RBP12.81□□□□□ -0.36
APTX-226ENST00000483148 PDCL3Q9H2J4 239 aa12.81□□□□□ -0.36
APTX-226ENST00000483148 NSD2O96028 1365 aa12.8□□□□□ -0.36
APTX-226ENST00000483148 XRCC6P12956 609 aaKnown RBP eCLIP12.8□□□□□ -0.36
APTX-226ENST00000483148 LTV1Q96GA3 475 aaPredicted RBP12.8□□□□□ -0.36
APTX-226ENST00000483148 PLIN1O60240 522 aa12.79□□□□□ -0.36
APTX-226ENST00000483148 MRE11P49959 708 aa12.79□□□□□ -0.36
APTX-226ENST00000483148 ANKRD26Q9UPS8 1709 aa12.79□□□□□ -0.36
APTX-226ENST00000483148 HSPA6P17066 643 aa12.79□□□□□ -0.36
APTX-226ENST00000483148 ZNF526Q8TF50 670 aaPredicted RBP12.79□□□□□ -0.36
APTX-226ENST00000483148 CALD1Q05682 793 aaKnown RBP12.78□□□□□ -0.36
APTX-226ENST00000483148 IP6K1Q92551 441 aa12.78□□□□□ -0.36
APTX-226ENST00000483148 GGNBP2Q9H3C7 697 aa12.78□□□□□ -0.36
APTX-226ENST00000483148 GPBP1L1Q9HC44 474 aaPredicted RBP12.78□□□□□ -0.36
APTX-226ENST00000483148 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
APTX-226ENST00000483148 LTN1O94822 1766 aa12.78□□□□□ -0.36
APTX-226ENST00000483148 CDCA7LQ96GN5 454 aa12.77□□□□□ -0.36
APTX-226ENST00000483148 FBLN1P23142 703 aa12.76□□□□□ -0.37
APTX-226ENST00000483148 COG3Q96JB2 828 aa12.76□□□□□ -0.37
APTX-226ENST00000483148 ANTXR1Q9H6X2 564 aa12.76□□□□□ -0.37
APTX-226ENST00000483148 GOLGB1Q14789 3259 aaKnown RBP12.76□□□□□ -0.37
APTX-226ENST00000483148 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
APTX-226ENST00000483148 LY75O60449 1722 aa12.76□□□□□ -0.37
APTX-226ENST00000483148 CNGB1Q14028 1251 aaPredicted RBP12.76□□□□□ -0.37
APTX-226ENST00000483148 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
APTX-226ENST00000483148 CD2APQ9Y5K6 639 aa12.76□□□□□ -0.37
APTX-226ENST00000483148 ADCY9O60503 1353 aa12.76□□□□□ -0.37
APTX-226ENST00000483148 ZCRB1Q8TBF4 217 aaKnown RBP12.75□□□□□ -0.37
APTX-226ENST00000483148 WWC3Q9ULE0 1092 aa12.74□□□□□ -0.37
APTX-226ENST00000483148 ESPNB1AK53 854 aa12.74□□□□□ -0.37
APTX-226ENST00000483148 CC2D1BQ5T0F9 858 aaKnown RBP12.74□□□□□ -0.37
APTX-226ENST00000483148 SMIM5Q71RC9 77 aa12.74□□□□□ -0.37
APTX-226ENST00000483148 KIF3CO14782 793 aa12.73□□□□□ -0.37
APTX-226ENST00000483148 TERF1P54274 439 aa12.73□□□□□ -0.37
APTX-226ENST00000483148 AMIGO3Q86WK7 504 aa12.73□□□□□ -0.37
APTX-226ENST00000483148 MAP7D2Q96T17 732 aa12.73□□□□□ -0.37
APTX-226ENST00000483148 DOT1LQ8TEK3 1739 aa12.73□□□□□ -0.37
APTX-226ENST00000483148 MCM4P33991 863 aa12.72□□□□□ -0.37
APTX-226ENST00000483148 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
APTX-226ENST00000483148 HOXC9P31274 260 aa12.71□□□□□ -0.37
APTX-226ENST00000483148 NCBP3Q53F19 620 aaKnown RBP12.71□□□□□ -0.37
APTX-226ENST00000483148 C20orf194Q5TEA3 1177 aa12.71□□□□□ -0.37
APTX-226ENST00000483148 MORC1Q86VD1 984 aa12.71□□□□□ -0.37
APTX-226ENST00000483148 UPF2Q9HAU5 1272 aaKnown RBP12.71□□□□□ -0.37
APTX-226ENST00000483148 MAP3K19Q56UN5 1328 aa12.71□□□□□ -0.37
APTX-226ENST00000483148 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
APTX-226ENST00000483148 MEGF6O75095 1541 aa12.71□□□□□ -0.38
APTX-226ENST00000483148 RGS3P49796 1198 aa12.71□□□□□ -0.38
APTX-226ENST00000483148 NBPF6Q5VWK0 638 aa12.7□□□□□ -0.38
APTX-226ENST00000483148 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
APTX-226ENST00000483148 NBPF4Q96M43 638 aa12.7□□□□□ -0.38
APTX-226ENST00000483148 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
APTX-226ENST00000483148 USHBP1Q8N6Y0 703 aa12.69□□□□□ -0.38
APTX-226ENST00000483148 MAP2P11137 1827 aaKnown RBP12.69□□□□□ -0.38
APTX-226ENST00000483148 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
APTX-226ENST00000483148 AMPHP49418 695 aa12.69□□□□□ -0.38
APTX-226ENST00000483148 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
APTX-226ENST00000483148 DDX11L8A8MPP1 907 aa12.68□□□□□ -0.38
APTX-226ENST00000483148 PTMSP20962 102 aa12.68□□□□□ -0.38
APTX-226ENST00000483148 DUSP27Q5VZP5 1158 aa12.68□□□□□ -0.38
APTX-226ENST00000483148 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
APTX-226ENST00000483148 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
APTX-226ENST00000483148 CHMP5Q9NZZ3 219 aa12.68□□□□□ -0.38
APTX-226ENST00000483148 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
APTX-226ENST00000483148 TRAK2O60296 914 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms