RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 PRKAR2BP31323 418 aa13.35□□□□□ -0.27
RPGR-208ENST00000482855 TCHHQ07283 1943 aa13.35□□□□□ -0.27
RPGR-208ENST00000482855 CUL4AQ13619 759 aa13.35□□□□□ -0.27
RPGR-208ENST00000482855 GDPD2Q9HCC8 539 aa13.35□□□□□ -0.27
RPGR-208ENST00000482855 RPGRIP1LQ68CZ1 1315 aa13.35□□□□□ -0.27
RPGR-208ENST00000482855 FOXD4L6Q3SYB3 417 aaPredicted RBP13.35□□□□□ -0.27
RPGR-208ENST00000482855 CCDC183Q5T5S1 534 aa13.35□□□□□ -0.27
RPGR-208ENST00000482855 FOXD4L3Q6VB84 417 aaPredicted RBP13.35□□□□□ -0.27
RPGR-208ENST00000482855 ANKRD44Q8N8A2 993 aa13.35□□□□□ -0.27
RPGR-208ENST00000482855 INTS4Q96HW7 963 aaKnown RBP13.35□□□□□ -0.27
RPGR-208ENST00000482855 ARHGEF28Q8N1W1 1705 aaKnown RBP13.34□□□□□ -0.27
RPGR-208ENST00000482855 U2AF2P26368 475 aaKnown RBP eCLIP13.34□□□□□ -0.273e-6■■□□□ 13.6
RPGR-208ENST00000482855 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
RPGR-208ENST00000482855 TAF3Q5VWG9 929 aa13.34□□□□□ -0.27
RPGR-208ENST00000482855 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
RPGR-208ENST00000482855 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
RPGR-208ENST00000482855 FAM135BQ49AJ0 1406 aa13.34□□□□□ -0.27
RPGR-208ENST00000482855 APBB1O00213 710 aa13.34□□□□□ -0.27
RPGR-208ENST00000482855 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
RPGR-208ENST00000482855 HCLS1P14317 486 aaPredicted RBP13.34□□□□□ -0.27
RPGR-208ENST00000482855 ANKRD7Q92527 254 aa13.34□□□□□ -0.27
RPGR-208ENST00000482855 THUMPD2Q9BTF0 503 aaKnown RBP13.34□□□□□ -0.27
RPGR-208ENST00000482855 IFT57Q9NWB7 429 aa13.34□□□□□ -0.27
RPGR-208ENST00000482855 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.28
RPGR-208ENST00000482855 HSPA2P54652 639 aa13.33□□□□□ -0.28
RPGR-208ENST00000482855 FBXO41Q8TF61 875 aa13.33□□□□□ -0.28
RPGR-208ENST00000482855 RIMS2Q9UQ26 1411 aa13.33□□□□□ -0.28
RPGR-208ENST00000482855 NFE2L2Q16236 605 aa13.33□□□□□ -0.28
RPGR-208ENST00000482855 RPAP2Q8IXW5 612 aaPredicted RBP13.33□□□□□ -0.28
RPGR-208ENST00000482855 PNPLA6Q8IY17 1366 aa13.33□□□□□ -0.28
RPGR-208ENST00000482855 FYB1O15117 783 aa13.32□□□□□ -0.28
RPGR-208ENST00000482855 KDM4AO75164 1064 aa13.32□□□□□ -0.28
RPGR-208ENST00000482855 MCCP23508 829 aa13.32□□□□□ -0.28
RPGR-208ENST00000482855 NOL8Q76FK4 1167 aaKnown RBP13.32□□□□□ -0.28
RPGR-208ENST00000482855 KIAA1524Q8TCG1 905 aa13.32□□□□□ -0.28
RPGR-208ENST00000482855 FEZ1Q99689 392 aa13.32□□□□□ -0.28
RPGR-208ENST00000482855 MBIPQ9NS73 344 aa13.32□□□□□ -0.28
RPGR-208ENST00000482855 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
RPGR-208ENST00000482855 WDR33Q9C0J8 1336 aaKnown RBP13.32□□□□□ -0.28
RPGR-208ENST00000482855 TPM3P06753 285 aa13.32□□□□□ -0.28
RPGR-208ENST00000482855 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
RPGR-208ENST00000482855 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
RPGR-208ENST00000482855 MX1P20591 662 aa13.31□□□□□ -0.28
RPGR-208ENST00000482855 SRPK2P78362 688 aaKnown RBP13.31□□□□□ -0.28
RPGR-208ENST00000482855 IDI1Q13907 227 aa13.31□□□□□ -0.28
RPGR-208ENST00000482855 ZNF771Q7L3S4 317 aaPredicted RBP13.31□□□□□ -0.28
RPGR-208ENST00000482855 CERKQ8TCT0 537 aa13.31□□□□□ -0.28
RPGR-208ENST00000482855 CTIFO43310 598 aaKnown RBP13.31□□□□□ -0.28
RPGR-208ENST00000482855 CEP85Q6P2H3 762 aa13.31□□□□□ -0.28
RPGR-208ENST00000482855 TERF2IPQ9NYB0 399 aa13.31□□□□□ -0.28
RPGR-208ENST00000482855 ALKQ9UM73 1620 aa13.3□□□□□ -0.28
RPGR-208ENST00000482855 IGSF3O75054 1194 aa13.3□□□□□ -0.28
RPGR-208ENST00000482855 SAFB2Q14151 953 aaKnown RBP eCLIP13.3□□□□□ -0.28
RPGR-208ENST00000482855 TMEM87AQ8NBN3 555 aa13.3□□□□□ -0.28
RPGR-208ENST00000482855 OGFRQ9NZT2 677 aa13.3□□□□□ -0.28
RPGR-208ENST00000482855 EID1Q9Y6B2 187 aa13.3□□□□□ -0.28
RPGR-208ENST00000482855 ZNF853P0CG23 659 aa13.29□□□□□ -0.28
RPGR-208ENST00000482855 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
RPGR-208ENST00000482855 C8orf58Q8NAV2 365 aa13.29□□□□□ -0.28
RPGR-208ENST00000482855 PHACTR3Q96KR7 559 aa13.29□□□□□ -0.28
RPGR-208ENST00000482855 PYCARDQ9ULZ3 195 aa13.29□□□□□ -0.28
RPGR-208ENST00000482855 GOLGA6L6A8MZA4 724 aa13.29□□□□□ -0.28
RPGR-208ENST00000482855 ANAPC15P60006 121 aa13.29□□□□□ -0.28
RPGR-208ENST00000482855 RTL1A6NKG5 1358 aa13.28□□□□□ -0.28
RPGR-208ENST00000482855 KCNF1Q9H3M0 494 aa13.28□□□□□ -0.28
RPGR-208ENST00000482855 RGS12O14924 1447 aa13.28□□□□□ -0.28
RPGR-208ENST00000482855 ADAMTS13Q76LX8 1427 aa13.28□□□□□ -0.28
RPGR-208ENST00000482855 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
RPGR-208ENST00000482855 HMOX1P09601 288 aa13.28□□□□□ -0.28
RPGR-208ENST00000482855 TPRNQ4KMQ1 711 aa13.28□□□□□ -0.28
RPGR-208ENST00000482855 PALD1Q9ULE6 856 aa13.28□□□□□ -0.28
RPGR-208ENST00000482855 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.28
RPGR-208ENST00000482855 SRCIN1Q9C0H9 1055 aa13.27□□□□□ -0.28
RPGR-208ENST00000482855 CGNQ9P2M7 1197 aaKnown RBP13.27□□□□□ -0.28
RPGR-208ENST00000482855 DCCP43146 1447 aa13.27□□□□□ -0.29
RPGR-208ENST00000482855 UBE2HP62256 183 aa13.27□□□□□ -0.29
RPGR-208ENST00000482855 OSBPL3Q9H4L5 887 aa13.27□□□□□ -0.29
RPGR-208ENST00000482855 CNPY2Q9Y2B0 182 aa13.27□□□□□ -0.29
RPGR-208ENST00000482855 PDE1AP54750 535 aa13.26□□□□□ -0.29
RPGR-208ENST00000482855 GABPB1Q06547 395 aaPredicted RBP13.26□□□□□ -0.29
RPGR-208ENST00000482855 SPC24Q8NBT2 197 aa13.26□□□□□ -0.29
RPGR-208ENST00000482855 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
RPGR-208ENST00000482855 KIF20BQ96Q89 1820 aa13.26□□□□□ -0.29
RPGR-208ENST00000482855 ANO2Q9NQ90 1003 aa13.26□□□□□ -0.29
RPGR-208ENST00000482855 RPAP1Q9BWH6 1393 aaPredicted RBP13.26□□□□□ -0.29
RPGR-208ENST00000482855 HMMRO75330 724 aa13.26□□□□□ -0.29
RPGR-208ENST00000482855 NCBP1Q09161 790 aaKnown RBP13.26□□□□□ -0.29
RPGR-208ENST00000482855 LMOD3Q0VAK6 560 aa13.26□□□□□ -0.29
RPGR-208ENST00000482855 MSH6P52701 1360 aa13.25□□□□□ -0.29
RPGR-208ENST00000482855 SYCP1Q15431 976 aa13.25□□□□□ -0.29
RPGR-208ENST00000482855 UPF3BQ9BZI7 483 aaKnown RBP13.25□□□□□ -0.29
RPGR-208ENST00000482855 PDE4CQ08493 712 aa13.25□□□□□ -0.29
RPGR-208ENST00000482855 HDGFL2Q7Z4V5 671 aaPredicted RBP13.25□□□□□ -0.29
RPGR-208ENST00000482855 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
RPGR-208ENST00000482855 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
RPGR-208ENST00000482855 AP5Z1O43299 807 aa13.24□□□□□ -0.29
RPGR-208ENST00000482855 GIMAP6Q6P9H5 292 aa13.24□□□□□ -0.29
RPGR-208ENST00000482855 FUCA2Q9BTY2 467 aa13.24□□□□□ -0.29
RPGR-208ENST00000482855 TMEM51Q9NW97 253 aa13.24□□□□□ -0.29
RPGR-208ENST00000482855 CTNNA3Q9UI47 895 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms