RNA–Protein interactions for RNA: ENST00000482657.1

LCNL1-204, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 3,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-204ENST00000482657 ZNF853P0CG23 659 aa18.56■□□□□ 0.56
LCNL1-204ENST00000482657 CWC27Q6UX04 472 aaKnown RBP18.56■□□□□ 0.56
LCNL1-204ENST00000482657 GOLGA6L4A6NEF3 574 aa18.56■□□□□ 0.56
LCNL1-204ENST00000482657 FGD1P98174 961 aa18.56■□□□□ 0.56
LCNL1-204ENST00000482657 CHAF1AQ13111 956 aaPredicted RBP18.56■□□□□ 0.56
LCNL1-204ENST00000482657 ESCO1Q5FWF5 840 aa18.55■□□□□ 0.56
LCNL1-204ENST00000482657 TMEM63CQ9P1W3 806 aa18.55■□□□□ 0.56
LCNL1-204ENST00000482657 USP25Q9UHP3 1055 aa18.55■□□□□ 0.56
LCNL1-204ENST00000482657 FAM135BQ49AJ0 1406 aa18.55■□□□□ 0.56
LCNL1-204ENST00000482657 PTPRCP08575 1304 aa18.55■□□□□ 0.56
LCNL1-204ENST00000482657 PNMA6EA0A0J9YXQ4 647 aa18.54■□□□□ 0.56
LCNL1-204ENST00000482657 PHAXQ9H814 394 aaKnown RBP18.54■□□□□ 0.56
LCNL1-204ENST00000482657 CAMSAP1Q5T5Y3 1602 aa18.54■□□□□ 0.56
LCNL1-204ENST00000482657 LRSAM1Q6UWE0 723 aa18.54■□□□□ 0.56
LCNL1-204ENST00000482657 SPC24Q8NBT2 197 aa18.54■□□□□ 0.56
LCNL1-204ENST00000482657 SRCIN1Q9C0H9 1055 aa18.54■□□□□ 0.56
LCNL1-204ENST00000482657 LRRC7Q96NW7 1537 aa18.54■□□□□ 0.56
LCNL1-204ENST00000482657 VPS37CA5D8V6 355 aaPredicted RBP18.53■□□□□ 0.56
LCNL1-204ENST00000482657 LTKP29376 864 aa18.53■□□□□ 0.56
LCNL1-204ENST00000482657 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
LCNL1-204ENST00000482657 SIL1Q9H173 461 aa18.53■□□□□ 0.56
LCNL1-204ENST00000482657 MPRIPQ6WCQ1 1025 aa18.53■□□□□ 0.56
LCNL1-204ENST00000482657 PPP1R9BQ96SB3 815 aa18.53■□□□□ 0.56
LCNL1-204ENST00000482657 GPT2Q8TD30 523 aa18.53■□□□□ 0.56
LCNL1-204ENST00000482657 ZKSCAN5Q9Y2L8 839 aa18.53■□□□□ 0.56
LCNL1-204ENST00000482657 ZNF330Q9Y3S2 320 aaPredicted RBP18.53■□□□□ 0.56
LCNL1-204ENST00000482657 FAM177BA6PVY3 158 aa18.52■□□□□ 0.56
LCNL1-204ENST00000482657 C1orf141Q5JVX7 400 aa18.52■□□□□ 0.56
LCNL1-204ENST00000482657 SPG7Q9UQ90 795 aa18.52■□□□□ 0.56
LCNL1-204ENST00000482657 NEO1Q92859 1461 aa18.52■□□□□ 0.56
LCNL1-204ENST00000482657 NEXMIFQ5QGS0 1516 aa18.52■□□□□ 0.56
LCNL1-204ENST00000482657 LMTK2Q8IWU2 1503 aa18.52■□□□□ 0.56
LCNL1-204ENST00000482657 CSB-PGBD3P0DP91 1061 aa18.52■□□□□ 0.56
LCNL1-204ENST00000482657 IFIT2P09913 472 aaKnown RBP18.52■□□□□ 0.55
LCNL1-204ENST00000482657 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.55
LCNL1-204ENST00000482657 PTPRMP28827 1452 aa18.52■□□□□ 0.55
LCNL1-204ENST00000482657 NSFL1CQ9UNZ2 370 aaKnown RBP18.51■□□□□ 0.55
LCNL1-204ENST00000482657 A0A0G2JS52 829 aa18.51■□□□□ 0.55
LCNL1-204ENST00000482657 ZNF445P59923 1031 aa18.51■□□□□ 0.55
LCNL1-204ENST00000482657 PNPLA6Q8IY17 1366 aa18.51■□□□□ 0.55
LCNL1-204ENST00000482657 PPP1R42Q7Z4L9 355 aa18.51■□□□□ 0.55
LCNL1-204ENST00000482657 TNRQ92752 1358 aa18.5■□□□□ 0.55
LCNL1-204ENST00000482657 TSC1Q92574 1164 aa18.5■□□□□ 0.55
LCNL1-204ENST00000482657 SMC3Q9UQE7 1217 aa18.5■□□□□ 0.55
LCNL1-204ENST00000482657 RTL1A6NKG5 1358 aa18.5■□□□□ 0.55
LCNL1-204ENST00000482657 PI4KAP2A4QPH2 592 aa18.5■□□□□ 0.55
LCNL1-204ENST00000482657 PI4KAP1Q8N8J0 262 aa18.5■□□□□ 0.55
LCNL1-204ENST00000482657 NOL7Q9UMY1 257 aaKnown RBP18.5■□□□□ 0.55
LCNL1-204ENST00000482657 DDIT3P35638 169 aa18.49■□□□□ 0.55
LCNL1-204ENST00000482657 MAP7D2Q96T17 732 aa18.49■□□□□ 0.55
LCNL1-204ENST00000482657 FRMPD1Q5SYB0 1578 aa18.49■□□□□ 0.55
LCNL1-204ENST00000482657 TTC12Q9H892 705 aaPredicted RBP18.49■□□□□ 0.55
LCNL1-204ENST00000482657 C17orf53Q8N3J3 647 aaPredicted RBP18.48■□□□□ 0.55
LCNL1-204ENST00000482657 SHPRHQ149N8 1683 aa18.48■□□□□ 0.55
LCNL1-204ENST00000482657 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
LCNL1-204ENST00000482657 FOSBP53539 338 aa18.48■□□□□ 0.55
LCNL1-204ENST00000482657 CLASRPQ8N2M8 674 aaKnown RBP18.48■□□□□ 0.55
LCNL1-204ENST00000482657 ESYT1Q9BSJ8 1104 aa18.48■□□□□ 0.55
LCNL1-204ENST00000482657 TSPOAP1O95153 1857 aa18.47■□□□□ 0.55
LCNL1-204ENST00000482657 CPA1P15085 419 aa18.47■□□□□ 0.55
LCNL1-204ENST00000482657 MCM2P49736 904 aa18.47■□□□□ 0.55
LCNL1-204ENST00000482657 PALD1Q9ULE6 856 aa18.47■□□□□ 0.55
LCNL1-204ENST00000482657 ROBO2Q9HCK4 1378 aa18.47■□□□□ 0.55
LCNL1-204ENST00000482657 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
LCNL1-204ENST00000482657 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
LCNL1-204ENST00000482657 AK9Q5TCS8 1911 aa18.47■□□□□ 0.55
LCNL1-204ENST00000482657 PPLO60437 1756 aa18.46■□□□□ 0.55
LCNL1-204ENST00000482657 SASS6Q6UVJ0 657 aa18.46■□□□□ 0.55
LCNL1-204ENST00000482657 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
LCNL1-204ENST00000482657 CHPF2Q9P2E5 772 aa18.46■□□□□ 0.55
LCNL1-204ENST00000482657 BTBD11A6QL63 1104 aa18.46■□□□□ 0.55
LCNL1-204ENST00000482657 MYL6BP14649 208 aa18.46■□□□□ 0.55
LCNL1-204ENST00000482657 ZHX1Q9UKY1 873 aaPredicted RBP18.46■□□□□ 0.55
LCNL1-204ENST00000482657 BRPF1P55201 1214 aaPredicted RBP18.46■□□□□ 0.55
LCNL1-204ENST00000482657 CNTROBQ8N137 903 aa18.46■□□□□ 0.55
LCNL1-204ENST00000482657 GPATCH3Q96I76 525 aa18.46■□□□□ 0.55
LCNL1-204ENST00000482657 WDR33Q9C0J8 1336 aaKnown RBP18.45■□□□□ 0.54
LCNL1-204ENST00000482657 ZC3H13Q5T200 1668 aaKnown RBP18.45■□□□□ 0.54
LCNL1-204ENST00000482657 PIK3R4Q99570 1358 aa18.45■□□□□ 0.54
LCNL1-204ENST00000482657 GADD45BO75293 160 aaPredicted RBP18.45■□□□□ 0.54
LCNL1-204ENST00000482657 USP48Q86UV5 1035 aa18.45■□□□□ 0.54
LCNL1-204ENST00000482657 UNC5CLQ8IV45 518 aa18.45■□□□□ 0.54
LCNL1-204ENST00000482657 CD163L1Q9NR16 1453 aa18.44■□□□□ 0.54
LCNL1-204ENST00000482657 PIK3C2BO00750 1634 aa18.44■□□□□ 0.54
LCNL1-204ENST00000482657 ARHGEF40Q8TER5 1519 aa18.44■□□□□ 0.54
LCNL1-204ENST00000482657 ARHGAP31Q2M1Z3 1444 aa18.44■□□□□ 0.54
LCNL1-204ENST00000482657 CBX1P83916 185 aa18.44■□□□□ 0.54
LCNL1-204ENST00000482657 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.44■□□□□ 0.54
LCNL1-204ENST00000482657 ZC3H6P61129 1189 aaKnown RBP18.44■□□□□ 0.54
LCNL1-204ENST00000482657 PA2G4Q9UQ80 394 aaKnown RBP18.44■□□□□ 0.54
LCNL1-204ENST00000482657 KCNA6P17658 529 aa18.43■□□□□ 0.54
LCNL1-204ENST00000482657 ATP8B2P98198 1209 aa18.43■□□□□ 0.54
LCNL1-204ENST00000482657 G3BP1Q13283 466 aaKnown RBP eCLIP18.43■□□□□ 0.54
LCNL1-204ENST00000482657 RIC3Q7Z5B4 369 aa18.43■□□□□ 0.54
LCNL1-204ENST00000482657 FERMT3Q86UX7 667 aa18.43■□□□□ 0.54
LCNL1-204ENST00000482657 THEMISQ8N1K5 641 aaPredicted RBP18.43■□□□□ 0.54
LCNL1-204ENST00000482657 LGR6Q9HBX8 967 aa18.43■□□□□ 0.54
LCNL1-204ENST00000482657 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
LCNL1-204ENST00000482657 ADCY5O95622 1261 aa18.43■□□□□ 0.54
LCNL1-204ENST00000482657 CASTP20810 708 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 254.9 ms